| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H9g09081 | 9:14,692,325-14,693,941 | + | C2H9g19252 | CX9g056618 | LOC_Os09g29360 | Os09g0468700 | - | Detail |
| C1H9g23244 | 9:14,697,562-14,700,538 | - | C2H9g25811 | CX9g055497 | LOC_Os09g29370 | Os09g0468800 | - | Detail |
| C1H9g22271 | 9:14,701,743-14,703,443 | + | C2H9g23871 | CX9g056285 | LOC_Os09g29380 | Os09g0468900 | - | Detail |
| C1H9g09920 | 9:14,707,785-14,708,488 | + | C2H9g20665 | CX9g054935 | LOC_Os09g29390 | Os09g0469300 | - | Detail |
| C1H9g26144 | 9:14,717,144-14,717,569 | - | - | CX9g057619 | - | - | - | Detail |
| C1H9g12400 | 9:14,721,948-14,731,654 | - | C2H9g09508 | CX9g057633 | LOC_Os09g29404 | Os09g0469400 | OsISA3 | Detail |
| C1H9g02401 | 9:14,736,940-14,742,643 | + | C2H9g21514 | CX9g056343 | LOC_Os09g29420 | Os09g0469900 | - | Detail |
| C1H9g07158 | 9:14,744,241-14,748,137 | + | C2H9g15645 | CX9g056572 | LOC_Os09g29430 | Os09g0470000 | - | Detail |
| C1H9g24171 | 9:14,761,165-14,762,232 | + | C2H9g00352 | CX9g057773 | LOC_Os09g29460 | Os09g0470500 | Oshox4 | Detail |
| C1H9g12977 | 9:14,775,571-14,781,153 | + | C2H9g02701 | CX9g057955 | LOC_Os09g29470 | Os09g0470900 | - | Detail |
| C1H9g10138 | 9:14,786,219-14,788,153 | + | C2H9g14076 | CX9g057569 | LOC_Os09g29480 | Os09g0471000 | - | Detail |
| C1H9g26480 | 9:14,789,308-14,792,394 | - | C2H9g19233 | CX9g057583 | LOC_Os09g29490 | Os09g0471100 | - | Detail |
| C1H9g19875 | 9:14,793,285-14,794,044 | + | - | - | - | Os10g0209433 | - | Detail |
| C1H9g07160 | 9:14,802,050-14,806,371 | - | C2H9g15334 | CX9g055547 | LOC_Os09g29510 | Os09g0471200 | - | Detail |
| C1H9g21291 | 9:14,812,875-14,816,281 | - | C2H9g13479 | CX9g055547 | LOC_Os09g29520 | Os09g0471400 | - | Detail |
| C1H9g15036 | 9:14,820,033-14,821,807 | - | C2H9g01991 | CX9g055547 | LOC_Os09g29540 | Os09g0471400 | - | Detail |
| C1H9g29416 | 9:14,821,975-14,822,700 | - | C2H9g19004 | CX9g055547 | LOC_Os09g29560 | Os09g0471550 | - | Detail |
| C1H9g20642 | 9:14,825,832-14,860,437 | + | C2H9g07478 | CX9g055969 | LOC_Os09g29630 | Os09g0471900 | - | Detail |
| C1H9g20829 | 9:14,831,128-14,835,461 | - | C2H9g15334 | CX9g055547 | LOC_Os09g29600 | Os09g0471600 | - | Detail |
| C1H9g21583 | 9:14,842,145-14,844,691 | - | C2H9g05799 | CX9g055547 | LOC_Os09g29510 | Os09g0471200 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g027101 | 3:8,542,808-8,545,171 | + | C1H3g04312 | C2H3g02883 | LOC_Os03g17350 | Os03g0281900 | ABCG5, OsABCG5, RCN1/OsABCG5 | Detail |
| CX3g025177 | 3:8,550,456-8,552,756 | + | C1H3g07058 | C2H3g04384 | LOC_Os03g17370 | Os03g0281900 | ABCG5, OsABCG5, RCN1/OsABCG5 | Detail |
| CX3g026382 | 3:8,561,353-8,565,309 | - | C1H3g16432 | - | LOC_Os03g17410 | Os03g0282232 | - | Detail |
| CX3g029559 | 3:8,578,177-8,580,260 | - | C1H11g04596 | - | LOC_Os03g17110 | Os03g0643050 | - | Detail |
| CX3g027572 | 3:8,584,974-8,586,191 | + | C1H3g15208 | C2H3g12675 | LOC_Os03g17432 | Os03g0282700 | - | Detail |
| CX3g026586 | 3:8,586,573-8,589,077 | - | C1H3g13015 | C2H3g17220 | LOC_Os03g17440 | Os03g0282800 | - | Detail |
| CX3g027144 | 3:8,589,606-8,592,482 | + | C1H3g25350 | C2H3g11550 | LOC_Os03g17450 | Os03g0282900 | - | Detail |
| CX3g030233 | 3:8,601,331-8,609,003 | - | C1H3g15668 | C2H3g23509 | LOC_Os03g08400 | Os03g0855700 | - | Detail |
| CX3g025910 | 3:8,610,791-8,611,117 | + | - | - | LOC_Os03g10280 | - | - | Detail |
| CX3g025299 | 3:8,615,902-8,618,567 | + | C1H3g04825 | C2H3g16412 | LOC_Os03g17490 | Os03g0283300 | - | Detail |
| CX3g029292 | 3:8,619,425-8,621,694 | - | C1H3g31389 | C2H3g25427 | LOC_Os03g17500 | Os03g0283400 | - | Detail |
| CX3g030457 | 3:8,625,315-8,627,111 | - | C1H3g29978 | C2H3g26100 | LOC_Os03g17510 | Os03g0283500 | - | Detail |
| CX3g030456 | 3:8,627,875-8,631,687 | - | C1H3g13527 | C2H3g10500 | LOC_Os03g17520 | Os03g0283600 | - | Detail |
| CX3g031290 | 3:8,635,384-8,635,833 | - | - | - | - | Os03g0283750 | - | Detail |
| CX3g026672 | 3:8,636,387-8,642,427 | + | C1H3g19722 | C2H3g23371 | LOC_Os03g17540 | Os03g0283800 | - | Detail |
| CX3g029803 | 3:8,643,870-8,647,244 | - | C1H3g11797 | C2H3g29700 | LOC_Os03g17550 | Os03g0283900 | - | Detail |
| CX3g025210 | 3:8,648,315-8,650,375 | + | C1H3g07283 | C2H3g23379 | LOC_Os03g17560 | Os03g0284000 | - | Detail |
| CX3g025348 | 3:8,651,570-8,659,425 | - | C1H3g27931 | C2H3g10813 | LOC_Os03g17570 | Os03g0284100 | OsPRR73, OsCCT11 | Detail |
| CX3g026952 | 3:8,684,398-8,685,066 | - | C1H3g12560 | C2H3g28337 | LOC_Os03g17580 | Os03g0284400 | - | Detail |
| CX3g028561 | 3:8,685,548-8,685,817 | + | - | - | - | - | - | Detail |