| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g08342 | 4:26,860,455-26,862,858 | - | C1H4g17112 | CX4g032086 | LOC_Os04g52570 | Os04g0616000 | - | Detail |
| C2H4g00410 | 4:26,864,370-26,866,805 | - | C1H4g26505 | CX4g034073 | LOC_Os04g52580 | Os04g0616100 | - | Detail |
| C2H4g07040 | 4:26,868,130-26,870,303 | - | C1H4g26370 | CX4g032089 | LOC_Os04g52590 | Os04g0616200 | - | Detail |
| C2H4g12282 | 4:26,874,951-26,875,307 | - | C1H4g21072 | CX4g036268 | LOC_Os04g52590 | Os04g0616400 | - | Detail |
| C2H4g22401 | 4:26,878,289-26,886,635 | - | C1H4g31488 | CX4g036268 | LOC_Os04g52600 | Os04g0616300 | - | Detail |
| C2H4g28668 | 4:26,888,339-26,896,966 | - | C1H4g29940 | CX4g036268 | LOC_Os04g52600 | Os04g0616500 | - | Detail |
| C2H4g26176 | 4:26,897,574-26,900,163 | - | C1H4g29940 | CX4g031595 | LOC_Os04g52614 | Os04g0616500 | - | Detail |
| C2H4g05269 | 4:26,904,505-26,910,856 | - | C1H4g10791 | CX4g036268 | LOC_Os04g52630 | Os04g0616600 | - | Detail |
| C2H4g09870 | 4:26,911,107-26,911,801 | - | C1H4g24234 | CX4g036268 | LOC_Os04g52630 | Os04g0616700 | - | Detail |
| C2H4g20899 | 4:26,913,346-26,921,722 | - | C1H4g29940 | CX4g036268 | LOC_Os04g52606 | Os04g0616600 | - | Detail |
| C2H4g04032 | 4:26,923,888-26,925,736 | + | C1H4g28831 | - | LOC_Os04g52650 | Os04g0616800 | - | Detail |
| C2H4g03706 | 4:26,930,573-26,930,965 | - | - | CX4g033769 | LOC_Os04g52670 | Os04g0617050 | - | Detail |
| C2H4g19976 | 4:26,936,812-26,937,096 | + | - | CX4g031883 | LOC_Os04g52684 | Os04g0617350 | - | Detail |
| C2H4g01536 | 4:26,944,623-26,949,955 | - | C1H4g27365 | CX4g036466 | LOC_Os04g52690 | Os04g0617600 | - | Detail |
| C2H4g04231 | 4:26,958,454-26,959,521 | - | C1H4g15358 | CX4g034356 | LOC_Os04g52700 | Os04g0617700 | - | Detail |
| C2H4g26522 | 4:26,967,888-26,971,634 | + | C1H4g09661 | CX4g031958 | LOC_Os04g52710 | Os04g0617800 | - | Detail |
| C2H4g04663 | 4:26,971,862-26,973,377 | - | C1H4g19784 | CX4g035396 | LOC_Os04g52720 | Os04g0617900 | - | Detail |
| C2H4g20761 | 4:26,977,278-26,981,514 | + | C1H4g16144 | CX4g036359 | - | - | - | Detail |
| C2H4g14147 | 4:26,982,929-26,986,653 | + | C1H4g21738 | CX4g032842 | LOC_Os04g52730 | Os04g0618200 | - | Detail |
| C2H4g28863 | 4:26,987,062-26,987,475 | - | - | CX4g031585 | LOC_Os04g52740 | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g026985 | 3:8,376,008-8,376,259 | + | - | - | - | - | - | Detail |
| CX3g031018 | 3:8,376,878-8,380,691 | - | C1H3g01283 | C2H3g16393 | LOC_Os03g17120 | Os03g0279400 | - | Detail |
| CX3g028159 | 3:8,389,086-8,389,941 | - | C1H3g17646 | C2H3g23941 | LOC_Os03g17140 | Os03g0279600 | - | Detail |
| CX3g031350 | 3:8,391,127-8,391,481 | - | C1H3g18147 | C2H3g19846 | LOC_Os03g12940 | Os03g0782500 | PIL13, OsPIL1, OsPIL13, OsbHLH152 | Detail |
| CX3g030469 | 3:8,410,665-8,411,240 | - | C1H3g07955 | C2H3g05642 | LOC_Os03g17150 | Os03g0279700 | - | Detail |
| CX3g028650 | 3:8,424,580-8,432,815 | + | C1H3g10805 | C2H3g08725 | LOC_Os03g17164 | Os03g0279832 | - | Detail |
| CX3g030780 | 3:8,439,082-8,447,138 | - | C1H3g05773 | C2H3g05359 | LOC_Os03g17180 | Os03g0280000 | - | Detail |
| CX3g028917 | 3:8,464,527-8,464,865 | - | - | - | - | - | - | Detail |
| CX3g028994 | 3:8,474,710-8,480,909 | + | C1H3g22706 | C2H3g27265 | LOC_Os03g17210 | Os03g0280700 | - | Detail |
| CX3g029125 | 3:8,482,951-8,483,910 | + | C1H3g01230 | C2H3g20835 | LOC_Os03g17220 | Os03g0280750 | - | Detail |
| CX3g025025 | 3:8,484,411-8,486,943 | - | C1H3g29688 | C2H3g25701 | LOC_Os03g17230 | Os03g0280800 | OsUXS1 | Detail |
| CX3g031048 | 3:8,488,693-8,491,505 | + | C1H3g02805 | C2H3g19709 | LOC_Os03g17240 | Os03g0281000 | - | Detail |
| CX3g028226 | 3:8,494,907-8,496,719 | + | C1H3g19384 | C2H3g01163 | LOC_Os03g17250 | Os03g0281100 | - | Detail |
| CX3g026165 | 3:8,501,318-8,502,262 | - | C1H3g05247 | C2H3g30239 | LOC_Os03g17260 | Os03g0281201 | - | Detail |
| CX3g025004 | 3:8,503,576-8,510,389 | - | C1H3g09869 | C2H3g10844 | LOC_Os03g17270 | Os03g0281300 | - | Detail |
| CX3g030681 | 3:8,513,332-8,514,048 | - | C1H3g20489 | C2H3g22572 | LOC_Os03g14100 | Os03g0378500 | Os2R_MYB37 | Detail |
| CX3g029052 | 3:8,514,383-8,514,868 | + | - | - | LOC_Os03g17280 | - | - | Detail |
| CX3g030928 | 3:8,521,476-8,523,995 | + | C1H3g05953 | C2H3g23238 | LOC_Os03g17300 | Os03g0281500 | OsCrRLK1L7 | Detail |
| CX3g030523 | 3:8,524,677-8,530,369 | - | C1H3g23808 | C2H3g13223 | LOC_Os03g17310 | Os03g0281600 | OsECA1 | Detail |
| CX3g026907 | 3:8,535,198-8,539,877 | - | C1H3g08368 | C2H3g28841 | LOC_Os03g17340 | Os03g0281800 | - | Detail |