| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H12g13824 | 12:471,664-473,316 | + | C2H12g15473 | CX12g015761 | LOC_Os12g01770 | Os11g0109301 | - | Detail |
| C1H12g21225 | 12:477,746-481,707 | + | C2H11g28522 | CX12g015779 | LOC_Os12g01830 | Os12g0109200 | - | Detail |
| C1H12g23544 | 12:483,031-486,562 | - | C2H12g30398 | CX12g017837 | LOC_Os12g01850 | Os12g0109300 | - | Detail |
| C1H12g18012 | 12:502,714-503,415 | + | C2H12g14425 | CX12g016625 | LOC_Os12g01910 | Os12g0109800 | - | Detail |
| C1H12g11854 | 12:507,598-511,015 | + | C2H12g14425 | CX12g015337 | LOC_Os12g01910 | Os12g0109850 | - | Detail |
| C1H12g24224 | 12:518,110-526,681 | - | C2H12g10658 | CX12g015162 | LOC_Os12g01922 | Os12g0110000 | - | Detail |
| C1H12g13590 | 12:530,989-534,815 | - | C2H12g12112 | CX12g017518 | LOC_Os12g01930 | Os12g0110100 | - | Detail |
| C1H12g23491 | 12:536,989-540,266 | - | C2H12g17021 | CX12g015078 | LOC_Os12g01940 | Os12g0110300 | - | Detail |
| C1H12g03381 | 12:540,440-543,018 | + | C2H12g05654 | CX12g016362 | LOC_Os12g01950 | Os12g0110400 | - | Detail |
| C1H12g03151 | 12:555,733-558,454 | + | C2H12g21050 | CX12g015887 | LOC_Os12g02020 | Os12g0111400 | - | Detail |
| C1H12g08905 | 12:564,240-564,671 | - | C2H12g15668 | CX12g018566 | LOC_Os12g02040 | Os12g0111600 | - | Detail |
| C1H12g25705 | 12:566,644-568,529 | + | C2H12g30261 | CX12g016102 | LOC_Os12g02050 | Os12g0111700 | - | Detail |
| C1H12g03557 | 12:572,980-573,749 | - | C2H12g14717 | CX12g016960 | LOC_Os12g02070 | Os12g0416500 | - | Detail |
| C1H12g09789 | 12:583,550-585,766 | + | C2H12g11323 | CX12g017779 | LOC_Os12g02080 | Os12g0112000 | - | Detail |
| C1H12g21197 | 12:592,518-593,519 | + | C2H12g07351 | CX12g016421 | LOC_Os12g02094 | Os12g0112200 | - | Detail |
| C1H12g08143 | 12:595,135-600,884 | + | C2H12g02181 | CX12g016020 | LOC_Os12g02100 | Os12g0112300 | - | Detail |
| C1H12g16160 | 12:601,343-605,348 | + | C2H12g27918 | CX12g017415 | LOC_Os12g02105 | Os12g0112401 | - | Detail |
| C1H12g21687 | 12:603,251-606,168 | - | C2H12g12409 | CX12g018065 | LOC_Os12g02120 | Os12g0112500 | - | Detail |
| C1H12g10573 | 12:609,815-615,438 | + | C2H12g21007 | CX12g017281 | LOC_Os12g02130 | Os12g0112600 | - | Detail |
| C1H12g21697 | 12:618,649-620,312 | + | C2H12g15227 | CX12g016942 | LOC_Os12g02150 | Os12g0112800 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g026985 | 3:8,376,008-8,376,259 | + | - | - | - | - | - | Detail |
| CX3g031018 | 3:8,376,878-8,380,691 | - | C1H3g01283 | C2H3g16393 | LOC_Os03g17120 | Os03g0279400 | - | Detail |
| CX3g028159 | 3:8,389,086-8,389,941 | - | C1H3g17646 | C2H3g23941 | LOC_Os03g17140 | Os03g0279600 | - | Detail |
| CX3g031350 | 3:8,391,127-8,391,481 | - | C1H3g18147 | C2H3g19846 | LOC_Os03g12940 | Os03g0782500 | PIL13, OsPIL1, OsPIL13, OsbHLH152 | Detail |
| CX3g030469 | 3:8,410,665-8,411,240 | - | C1H3g07955 | C2H3g05642 | LOC_Os03g17150 | Os03g0279700 | - | Detail |
| CX3g028650 | 3:8,424,580-8,432,815 | + | C1H3g10805 | C2H3g08725 | LOC_Os03g17164 | Os03g0279832 | - | Detail |
| CX3g030780 | 3:8,439,082-8,447,138 | - | C1H3g05773 | C2H3g05359 | LOC_Os03g17180 | Os03g0280000 | - | Detail |
| CX3g028917 | 3:8,464,527-8,464,865 | - | - | - | - | - | - | Detail |
| CX3g028994 | 3:8,474,710-8,480,909 | + | C1H3g22706 | C2H3g27265 | LOC_Os03g17210 | Os03g0280700 | - | Detail |
| CX3g029125 | 3:8,482,951-8,483,910 | + | C1H3g01230 | C2H3g20835 | LOC_Os03g17220 | Os03g0280750 | - | Detail |
| CX3g025025 | 3:8,484,411-8,486,943 | - | C1H3g29688 | C2H3g25701 | LOC_Os03g17230 | Os03g0280800 | OsUXS1 | Detail |
| CX3g031048 | 3:8,488,693-8,491,505 | + | C1H3g02805 | C2H3g19709 | LOC_Os03g17240 | Os03g0281000 | - | Detail |
| CX3g028226 | 3:8,494,907-8,496,719 | + | C1H3g19384 | C2H3g01163 | LOC_Os03g17250 | Os03g0281100 | - | Detail |
| CX3g026165 | 3:8,501,318-8,502,262 | - | C1H3g05247 | C2H3g30239 | LOC_Os03g17260 | Os03g0281201 | - | Detail |
| CX3g025004 | 3:8,503,576-8,510,389 | - | C1H3g09869 | C2H3g10844 | LOC_Os03g17270 | Os03g0281300 | - | Detail |
| CX3g030681 | 3:8,513,332-8,514,048 | - | C1H3g20489 | C2H3g22572 | LOC_Os03g14100 | Os03g0378500 | Os2R_MYB37 | Detail |
| CX3g029052 | 3:8,514,383-8,514,868 | + | - | - | LOC_Os03g17280 | - | - | Detail |
| CX3g030928 | 3:8,521,476-8,523,995 | + | C1H3g05953 | C2H3g23238 | LOC_Os03g17300 | Os03g0281500 | OsCrRLK1L7 | Detail |
| CX3g030523 | 3:8,524,677-8,530,369 | - | C1H3g23808 | C2H3g13223 | LOC_Os03g17310 | Os03g0281600 | OsECA1 | Detail |
| CX3g026907 | 3:8,535,198-8,539,877 | - | C1H3g08368 | C2H3g28841 | LOC_Os03g17340 | Os03g0281800 | - | Detail |