| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H11g01371 | 11:18,869,859-18,874,327 | + | C2H11g09477 | CX11g014448 | LOC_Os11g35840 | Os11g0560900 | - | Detail |
| C1H11g12501 | 11:18,880,962-18,882,947 | + | C2H11g16600 | CX11g011007 | LOC_Os11g30810 | Os11g0503900 | - | Detail |
| C1H11g15827 | 11:18,896,732-18,898,124 | + | C2H11g07163 | CX11g010958 | LOC_Os11g35930 | Os11g0566800 | OsCHS28 | Detail |
| C1H11g05196 | 11:18,937,834-18,939,411 | + | C2H11g18258 | CX11g012075 | LOC_Os11g35930 | Os11g0566800 | OsCHS28 | Detail |
| C1H11g25031 | 11:18,966,649-18,969,614 | - | C2H11g14780 | CX11g012826 | LOC_Os11g36030 | Os11g0568300 | - | Detail |
| C1H11g07031 | 11:18,974,638-18,975,081 | + | C2H11g15085 | CX11g014099 | LOC_Os11g36050 | Os11g0568500 | - | Detail |
| C1H11g26260 | 11:18,976,022-18,980,556 | + | C2H11g09728 | CX11g012110 | LOC_Os11g36060 | Os11g0568600 | - | Detail |
| C1H11g06089 | 11:18,984,671-18,989,669 | + | C2H11g23880 | CX11g014538 | LOC_Os11g36070 | Os11g0568700 | - | Detail |
| C1H11g21320 | 11:18,992,846-18,998,709 | + | C2H11g20593 | CX11g014220 | LOC_Os11g36090 | Os11g0569800 | - | Detail |
| C1H11g07726 | 11:19,001,976-19,002,989 | + | C2H11g00400 | CX11g013497 | LOC_Os11g36140 | Os11g0569300 | - | Detail |
| C1H11g31161 | 11:19,012,900-19,016,496 | + | C2H11g01638 | CX11g012210 | LOC_Os11g35500 | Os11g0570000 | COG1 | Detail |
| C1H11g16496 | 11:19,047,163-19,051,175 | + | C2H11g15178 | CX11g012442 | LOC_Os11g36340 | Os11g0571900 | - | Detail |
| C1H11g22846 | 11:19,053,134-19,062,941 | + | C2H11g29311 | CX11g012542 | LOC_Os11g36390 | Os11g0572100 | - | Detail |
| C1H11g03106 | 11:19,081,478-19,084,887 | - | C2H11g25750 | CX11g011256 | LOC_Os11g36410 | Os11g0572301 | - | Detail |
| C1H11g20066 | 11:19,088,465-19,092,380 | + | C2H11g02062 | CX11g014441 | LOC_Os11g36420 | Os11g0572400 | - | Detail |
| C1H11g00394 | 11:19,092,866-19,097,924 | - | C2H11g14097 | CX11g013970 | LOC_Os11g36430 | Os11g0572500 | - | Detail |
| C1H11g01914 | 11:19,098,538-19,102,365 | + | C2H11g11863 | CX11g011357 | LOC_Os11g36440 | Os11g0572700 | OsCRTISO, MHZ5, MHZ5/CRTISO, CRTISO | Detail |
| C1H11g18936 | 11:19,103,515-19,105,923 | - | C2H11g13422 | CX11g011222 | LOC_Os11g36450 | Os11g0572800 | JMJ710 | Detail |
| C1H11g19358 | 11:19,109,087-19,116,757 | - | C2H11g26770 | CX11g010869 | - | - | - | Detail |
| C1H11g13497 | 11:19,118,039-19,122,436 | - | C2H11g29389 | CX11g010869 | LOC_Os11g36890 | Os11g0577350 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g026985 | 3:8,376,008-8,376,259 | + | - | - | - | - | - | Detail |
| CX3g031018 | 3:8,376,878-8,380,691 | - | C1H3g01283 | C2H3g16393 | LOC_Os03g17120 | Os03g0279400 | - | Detail |
| CX3g028159 | 3:8,389,086-8,389,941 | - | C1H3g17646 | C2H3g23941 | LOC_Os03g17140 | Os03g0279600 | - | Detail |
| CX3g031350 | 3:8,391,127-8,391,481 | - | C1H3g18147 | C2H3g19846 | LOC_Os03g12940 | Os03g0782500 | PIL13, OsPIL1, OsPIL13, OsbHLH152 | Detail |
| CX3g030469 | 3:8,410,665-8,411,240 | - | C1H3g07955 | C2H3g05642 | LOC_Os03g17150 | Os03g0279700 | - | Detail |
| CX3g028650 | 3:8,424,580-8,432,815 | + | C1H3g10805 | C2H3g08725 | LOC_Os03g17164 | Os03g0279832 | - | Detail |
| CX3g030780 | 3:8,439,082-8,447,138 | - | C1H3g05773 | C2H3g05359 | LOC_Os03g17180 | Os03g0280000 | - | Detail |
| CX3g028917 | 3:8,464,527-8,464,865 | - | - | - | - | - | - | Detail |
| CX3g028994 | 3:8,474,710-8,480,909 | + | C1H3g22706 | C2H3g27265 | LOC_Os03g17210 | Os03g0280700 | - | Detail |
| CX3g029125 | 3:8,482,951-8,483,910 | + | C1H3g01230 | C2H3g20835 | LOC_Os03g17220 | Os03g0280750 | - | Detail |
| CX3g025025 | 3:8,484,411-8,486,943 | - | C1H3g29688 | C2H3g25701 | LOC_Os03g17230 | Os03g0280800 | OsUXS1 | Detail |
| CX3g031048 | 3:8,488,693-8,491,505 | + | C1H3g02805 | C2H3g19709 | LOC_Os03g17240 | Os03g0281000 | - | Detail |
| CX3g028226 | 3:8,494,907-8,496,719 | + | C1H3g19384 | C2H3g01163 | LOC_Os03g17250 | Os03g0281100 | - | Detail |
| CX3g026165 | 3:8,501,318-8,502,262 | - | C1H3g05247 | C2H3g30239 | LOC_Os03g17260 | Os03g0281201 | - | Detail |
| CX3g025004 | 3:8,503,576-8,510,389 | - | C1H3g09869 | C2H3g10844 | LOC_Os03g17270 | Os03g0281300 | - | Detail |
| CX3g030681 | 3:8,513,332-8,514,048 | - | C1H3g20489 | C2H3g22572 | LOC_Os03g14100 | Os03g0378500 | Os2R_MYB37 | Detail |
| CX3g029052 | 3:8,514,383-8,514,868 | + | - | - | LOC_Os03g17280 | - | - | Detail |
| CX3g030928 | 3:8,521,476-8,523,995 | + | C1H3g05953 | C2H3g23238 | LOC_Os03g17300 | Os03g0281500 | OsCrRLK1L7 | Detail |
| CX3g030523 | 3:8,524,677-8,530,369 | - | C1H3g23808 | C2H3g13223 | LOC_Os03g17310 | Os03g0281600 | OsECA1 | Detail |
| CX3g026907 | 3:8,535,198-8,539,877 | - | C1H3g08368 | C2H3g28841 | LOC_Os03g17340 | Os03g0281800 | - | Detail |