| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H6g01261 | 6:26,735,112-26,738,840 | - | C2H6g03141 | CX6g044995 | LOC_Os06g51110 | Os06g0726800 | - | Detail |
| C1H6g01765 | 6:26,745,378-26,747,350 | + | C2H6g25948 | CX6g041982 | LOC_Os06g51130 | Os06g0726900 | - | Detail |
| C1H6g25016 | 6:26,755,359-26,755,925 | - | - | - | LOC_Os06g51140 | Os06g0727000 | - | Detail |
| C1H6g02961 | 6:26,762,495-26,766,549 | + | C2H6g13033 | CX6g043193 | LOC_Os06g51150 | Os06g0727200 | - | Detail |
| C1H6g02247 | 6:26,766,886-26,769,783 | - | C2H6g17307 | CX6g045357 | LOC_Os06g51160 | Os06g0727300 | - | Detail |
| C1H6g11236 | 6:26,771,666-26,774,718 | - | C2H6g17476 | CX6g043416 | LOC_Os06g51170 | Os06g0727400 | - | Detail |
| C1H6g12017 | 6:26,779,467-26,783,743 | + | C2H6g21888 | CX6g043376 | LOC_Os06g51180 | Os06g0727600 | - | Detail |
| C1H6g02408 | 6:26,786,116-26,791,225 | + | C2H6g24113 | CX6g045891 | LOC_Os06g51190 | Os06g0727700 | - | Detail |
| C1H6g24428 | 6:26,795,969-26,798,525 | + | C2H6g26001 | CX6g043291 | LOC_Os06g51200 | Os06g0727800 | - | Detail |
| C1H6g01342 | 6:26,800,285-26,801,877 | + | - | CX6g045810 | LOC_Os06g51210 | Os06g0727900 | - | Detail |
| C1H6g17703 | 6:26,804,433-26,806,273 | + | C2H6g25632 | CX6g043902 | LOC_Os06g51220 | Os06g0728000 | - | Detail |
| C1H6g26909 | 6:26,813,641-26,816,627 | + | C2H6g15055 | CX6g043573 | LOC_Os06g51230 | Os06g0728200 | - | Detail |
| C1H6g17190 | 6:26,821,762-26,822,820 | + | - | CX6g044171 | LOC_Os06g51240 | Os06g0728500 | - | Detail |
| C1H6g18597 | 6:26,826,857-26,835,009 | + | C2H6g26917 | CX6g042569 | LOC_Os06g51250 | Os06g0728600 | - | Detail |
| C1H6g12115 | 6:26,839,268-26,841,674 | - | C2H6g16385 | CX6g043553 | LOC_Os06g51260 | Os06g0728700 | - | Detail |
| C1H6g02583 | 6:26,845,545-26,861,002 | - | C2H6g07555 | CX6g042563 | LOC_Os06g51270 | Os06g0728800 | - | Detail |
| C1H6g03154 | 6:26,864,685-26,868,414 | - | C2H6g08886 | CX6g044653 | LOC_Os06g51290 | Os06g0729000 | - | Detail |
| C1H6g11628 | 6:26,878,985-26,886,627 | + | - | - | - | - | - | Detail |
| C1H6g03228 | 6:26,890,527-26,891,104 | + | C2H6g07406 | CX6g041257 | LOC_Os06g51320 | Os06g0729400 | - | Detail |
| C1H6g31435 | 6:26,891,326-26,897,254 | - | C2H6g30594 | CX6g041559 | LOC_Os06g51330 | Os06g0729500 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g026985 | 3:8,376,008-8,376,259 | + | - | - | - | - | - | Detail |
| CX3g031018 | 3:8,376,878-8,380,691 | - | C1H3g01283 | C2H3g16393 | LOC_Os03g17120 | Os03g0279400 | - | Detail |
| CX3g028159 | 3:8,389,086-8,389,941 | - | C1H3g17646 | C2H3g23941 | LOC_Os03g17140 | Os03g0279600 | - | Detail |
| CX3g031350 | 3:8,391,127-8,391,481 | - | C1H3g18147 | C2H3g19846 | LOC_Os03g12940 | Os03g0782500 | PIL13, OsPIL1, OsPIL13, OsbHLH152 | Detail |
| CX3g030469 | 3:8,410,665-8,411,240 | - | C1H3g07955 | C2H3g05642 | LOC_Os03g17150 | Os03g0279700 | - | Detail |
| CX3g028650 | 3:8,424,580-8,432,815 | + | C1H3g10805 | C2H3g08725 | LOC_Os03g17164 | Os03g0279832 | - | Detail |
| CX3g030780 | 3:8,439,082-8,447,138 | - | C1H3g05773 | C2H3g05359 | LOC_Os03g17180 | Os03g0280000 | - | Detail |
| CX3g028917 | 3:8,464,527-8,464,865 | - | - | - | - | - | - | Detail |
| CX3g028994 | 3:8,474,710-8,480,909 | + | C1H3g22706 | C2H3g27265 | LOC_Os03g17210 | Os03g0280700 | - | Detail |
| CX3g029125 | 3:8,482,951-8,483,910 | + | C1H3g01230 | C2H3g20835 | LOC_Os03g17220 | Os03g0280750 | - | Detail |
| CX3g025025 | 3:8,484,411-8,486,943 | - | C1H3g29688 | C2H3g25701 | LOC_Os03g17230 | Os03g0280800 | OsUXS1 | Detail |
| CX3g031048 | 3:8,488,693-8,491,505 | + | C1H3g02805 | C2H3g19709 | LOC_Os03g17240 | Os03g0281000 | - | Detail |
| CX3g028226 | 3:8,494,907-8,496,719 | + | C1H3g19384 | C2H3g01163 | LOC_Os03g17250 | Os03g0281100 | - | Detail |
| CX3g026165 | 3:8,501,318-8,502,262 | - | C1H3g05247 | C2H3g30239 | LOC_Os03g17260 | Os03g0281201 | - | Detail |
| CX3g025004 | 3:8,503,576-8,510,389 | - | C1H3g09869 | C2H3g10844 | LOC_Os03g17270 | Os03g0281300 | - | Detail |
| CX3g030681 | 3:8,513,332-8,514,048 | - | C1H3g20489 | C2H3g22572 | LOC_Os03g14100 | Os03g0378500 | Os2R_MYB37 | Detail |
| CX3g029052 | 3:8,514,383-8,514,868 | + | - | - | LOC_Os03g17280 | - | - | Detail |
| CX3g030928 | 3:8,521,476-8,523,995 | + | C1H3g05953 | C2H3g23238 | LOC_Os03g17300 | Os03g0281500 | OsCrRLK1L7 | Detail |
| CX3g030523 | 3:8,524,677-8,530,369 | - | C1H3g23808 | C2H3g13223 | LOC_Os03g17310 | Os03g0281600 | OsECA1 | Detail |
| CX3g026907 | 3:8,535,198-8,539,877 | - | C1H3g08368 | C2H3g28841 | LOC_Os03g17340 | Os03g0281800 | - | Detail |