| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g24976 | 3:1,372,275-1,376,010 | - | C1H3g25549 | CX3g029868 | LOC_Os03g03650 | Os03g0128500 | OsPolδ2 | Detail |
| C2H3g12077 | 3:1,387,255-1,391,634 | + | C1H3g29800 | CX3g027339 | LOC_Os03g03660 | Os03g0128700 | OsCPK7, OsCDPK13, OsCDPK1, OsCDPK11, OsCDPK12 | Detail |
| C2H3g19950 | 3:1,392,232-1,393,624 | - | C1H3g05509 | CX3g030927 | LOC_Os03g03670 | Os03g0128800 | - | Detail |
| C2H3g30344 | 3:1,394,053-1,399,749 | + | C1H3g30034 | CX3g026694 | LOC_Os03g03680 | Os03g0128932 | OsAZT3 | Detail |
| C2H3g21860 | 3:1,404,013-1,406,291 | + | C1H3g26756 | CX3g026791 | LOC_Os03g03690 | Os03g0129000 | OsPIG-F, PIG-F | Detail |
| C2H3g23213 | 3:1,406,683-1,410,322 | - | C1H3g08238 | CX3g030210 | LOC_Os03g03700 | Os03g0129100 | - | Detail |
| C2H3g26117 | 3:1,414,790-1,423,165 | - | C1H3g14096 | CX3g028820 | LOC_Os03g03710 | Os03g0129200 | - | Detail |
| C2H3g26797 | 3:1,423,761-1,427,115 | + | C1H3g27982 | CX3g028073 | LOC_Os03g03720 | Os03g0129300 | - | Detail |
| C2H3g27426 | 3:1,428,759-1,429,260 | + | C1H3g08454 | CX3g030443 | - | Os03g0129400 | - | Detail |
| C2H3g07876 | 3:1,429,591-1,432,220 | - | C1H3g20373 | CX3g026210 | LOC_Os03g03730 | Os03g0129800 | - | Detail |
| C2H3g29721 | 3:1,433,820-1,434,149 | - | C1H3g01611 | CX3g026524 | LOC_Os03g03760 | - | - | Detail |
| C2H3g13057 | 3:1,434,301-1,438,600 | - | C1H3g14716 | CX3g026524 | LOC_Os03g03760 | Os03g0624000 | - | Detail |
| C2H3g09690 | 3:1,449,674-1,450,205 | - | - | - | - | - | - | Detail |
| C2H3g05832 | 3:1,450,869-1,451,201 | - | C1H3g30382 | CX3g030654 | LOC_Os03g03770 | Os03g0129900 | - | Detail |
| C2H3g07821 | 3:1,470,488-1,472,663 | + | C1H3g27546 | CX3g028774 | LOC_Os03g03790 | Os03g0130100 | OsCNL1 | Detail |
| C2H3g09589 | 3:1,475,498-1,476,222 | + | C1H3g09567 | CX3g030766 | LOC_Os03g22700 | - | - | Detail |
| C2H3g10593 | 3:1,478,539-1,478,893 | + | C1H3g01006 | CX3g027416 | LOC_Os03g03810 | Os03g0130300 | OsDEF8 | Detail |
| C2H3g18638 | 3:1,480,046-1,483,365 | + | C1H3g27010 | CX3g029936 | LOC_Os03g03820 | Os03g0130400 | - | Detail |
| C2H3g06449 | 3:1,483,681-1,491,487 | - | C1H3g11205 | CX3g030536 | LOC_Os03g03830 | Os03g0130500 | - | Detail |
| C2H3g20859 | 3:1,495,493-1,500,360 | - | C1H3g17616 | CX3g029509 | LOC_Os03g03860 | Os03g0130700 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g026295 | 3:8,264,580-8,267,702 | - | C1H3g14663 | C2H3g11000 | LOC_Os03g16900 | Os03g0277000 | OsGDI3 | Detail |
| CX3g025051 | 3:8,278,968-8,280,587 | + | C1H3g00724 | C2H3g13683 | LOC_Os03g16910 | Os03g0277100 | - | Detail |
| CX3g029302 | 3:8,288,257-8,290,920 | - | C1H3g31204 | C2H3g22367 | LOC_Os03g16920 | Os03g0277300 | - | Detail |
| CX3g027598 | 3:8,293,512-8,294,528 | - | C1H3g11982 | C2H3g22094 | LOC_Os03g16940 | Os03g0277500 | OsGLYI3 | Detail |
| CX3g029379 | 3:8,296,640-8,299,709 | - | C1H3g12989 | C2H3g14605 | LOC_Os03g16950 | Os03g0277600 | - | Detail |
| CX3g026822 | 3:8,300,737-8,301,617 | - | C1H3g21064 | C2H3g07396 | LOC_Os03g16960 | Os03g0277700 | - | Detail |
| CX3g030561 | 3:8,311,102-8,314,273 | + | C1H3g04687 | C2H3g01539 | LOC_Os03g16980 | Os03g0278000 | - | Detail |
| CX3g025505 | 3:8,318,588-8,321,679 | + | C1H3g07237 | C2H3g08917 | LOC_Os03g17000 | Os03g0278200 | - | Detail |
| CX3g026094 | 3:8,323,938-8,324,174 | + | - | - | - | Os03g0278333 | - | Detail |
| CX3g027017 | 3:8,324,195-8,326,216 | - | C1H3g25194 | C2H3g03680 | LOC_Os03g17010 | Os03g0278300 | - | Detail |
| CX3g025539 | 3:8,328,447-8,328,737 | + | - | - | - | Os03g0278366 | - | Detail |
| CX3g030797 | 3:8,329,049-8,331,793 | - | C1H3g03328 | C2H3g05174 | LOC_Os03g17020 | Os03g0278400 | - | Detail |
| CX3g030195 | 3:8,334,835-8,338,673 | + | C1H3g16199 | C2H3g17017 | LOC_Os03g17030 | Os03g0278500 | - | Detail |
| CX3g026075 | 3:8,349,421-8,350,008 | - | - | C2H3g11032 | - | Os03g0278566 | - | Detail |
| CX3g025742 | 3:8,350,337-8,359,077 | + | C1H3g31491 | C2H3g02257 | LOC_Os03g17050 | Os03g0278700 | - | Detail |
| CX3g027653 | 3:8,360,125-8,361,378 | - | C1H3g01943 | C2H3g24586 | LOC_Os03g17060 | Os03g0278800 | - | Detail |
| CX3g028557 | 3:8,362,324-8,362,956 | - | C1H3g21484 | C2H3g27921 | LOC_Os03g17070 | Os03g0278900 | - | Detail |
| CX3g027530 | 3:8,363,486-8,363,944 | + | C1H5g22852 | C2H5g26633 | LOC_Os03g17084 | Os03g0279000 | - | Detail |
| CX3g025758 | 3:8,364,871-8,365,334 | + | C1H3g21261 | C2H3g12181 | - | Os03g0569900 | - | Detail |
| CX3g029719 | 3:8,368,799-8,369,419 | - | C1H3g00735 | C2H3g30418 | LOC_Os03g17100 | Os03g0279200 | - | Detail |