| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g10053 | 4:22,556,566-22,561,222 | - | C2H4g00297 | CX4g034783 | LOC_Os04g43690 | Os04g0517300 | - | Detail |
| C1H4g19364 | 4:22,561,456-22,566,949 | + | C2H4g03267 | CX4g034365 | LOC_Os04g43700 | Os04g0517400 | - | Detail |
| C1H4g27983 | 4:22,570,379-22,571,379 | + | C2H4g18098 | CX4g036341 | LOC_Os04g43710 | Os04g0517500 | - | Detail |
| C1H4g02633 | 4:22,575,097-22,578,375 | - | C2H4g25250 | CX4g031725 | LOC_Os04g43730 | Os04g0517700 | - | Detail |
| C1H4g21239 | 4:22,584,597-22,588,168 | - | C2H4g18845 | CX4g032795 | LOC_Os04g43750 | Os04g0518000 | - | Detail |
| C1H4g17678 | 4:22,592,726-22,595,712 | - | C2H4g17450 | CX4g031424 | LOC_Os04g43760 | Os04g0518100 | - | Detail |
| C1H4g22637 | 4:22,601,648-22,604,291 | - | C2H4g28869 | CX4g031711 | LOC_Os04g43800 | Os04g0518400 | OsPAL6 | Detail |
| C1H4g07857 | 4:22,612,924-22,615,739 | - | C2H4g10523 | - | LOC_Os04g43824 | Os04g0518650 | - | Detail |
| C1H4g21094 | 4:22,624,582-22,628,348 | + | C2H4g12982 | CX4g035278 | LOC_Os04g43840 | Os04g0518800 | LABA1, LOGL6, OsLOGL6, An-2 | Detail |
| C1H4g30028 | 4:22,643,421-22,646,106 | + | C2H4g03913 | CX4g031681 | LOC_Os04g43910 | Os04g0519700 | ARF10, qSE4 | Detail |
| C1H4g09015 | 4:22,653,208-22,664,875 | - | C2H4g13261 | CX4g033896 | LOC_Os04g43916 | Os04g0519900 | - | Detail |
| C1H4g07978 | 4:22,665,750-22,670,307 | - | C2H4g00328 | CX4g033084 | LOC_Os04g43922 | Os04g0520000 | - | Detail |
| C1H4g29455 | 4:22,690,768-22,692,591 | + | C2H4g13133 | CX4g032514 | LOC_Os04g44060 | Os04g0521100 | OsPIP2;3 | Detail |
| C1H4g20974 | 4:22,693,342-22,693,635 | - | C2H4g21649 | - | - | - | - | Detail |
| C1H4g01962 | 4:22,693,922-22,694,944 | - | C2H4g30421 | - | - | - | - | Detail |
| C1H4g05956 | 4:22,697,067-22,697,330 | + | C2H4g17426 | CX4g034857 | LOC_Os04g44070 | Os04g0521300 | - | Detail |
| C1H4g04229 | 4:22,700,018-22,702,759 | + | C2H4g25112 | CX4g032134 | LOC_Os04g44090 | Os04g0521600 | - | Detail |
| C1H4g14520 | 4:22,706,368-22,709,546 | + | C2H4g19435 | CX4g031957 | LOC_Os04g44110 | Os04g0521800 | - | Detail |
| C1H4g13540 | 4:22,711,689-22,712,061 | + | C2H4g20077 | CX4g034351 | LOC_Os04g44130 | Os04g0522100 | CAL2 | Detail |
| C1H4g14130 | 4:22,727,345-22,728,093 | - | C2H4g17950 | CX4g035905 | LOC_Os04g44150 | Os04g0522500 | GA2ox6, OsGA2ox6 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g029074 | 3:8,039,836-8,042,069 | - | C1H3g27326 | C2H3g05813 | LOC_Os03g16610 | Os03g0273200 | - | Detail |
| CX3g026218 | 3:8,051,760-8,052,047 | - | - | - | - | - | - | Detail |
| CX3g029547 | 3:8,058,142-8,062,502 | + | C1H3g14918 | C2H3g10490 | LOC_Os03g02370 | - | - | Detail |
| CX3g027529 | 3:8,061,390-8,061,953 | - | C1H9g18306 | C2H1g25920 | LOC_Os02g58420 | - | - | Detail |
| CX3g027726 | 3:8,070,680-8,072,325 | + | C1H3g04298 | C2H3g16464 | LOC_Os03g16670 | Os03g0273800 | OsHAD3 | Detail |
| CX3g025279 | 3:8,085,706-8,090,488 | + | C1H3g26678 | C2H3g21796 | LOC_Os03g16690 | Os03g0274000 | - | Detail |
| CX3g027149 | 3:8,111,823-8,115,263 | + | C1H3g14789 | C2H3g00969 | LOC_Os03g16700 | Os03g0274300 | - | Detail |
| CX3g026360 | 3:8,122,071-8,125,108 | + | C1H3g26177 | C2H3g06926 | LOC_Os03g16730 | Os03g0274700 | - | Detail |
| CX3g025011 | 3:8,125,775-8,128,453 | - | C1H3g25668 | C2H3g23241 | LOC_Os03g16740 | Os03g0274800 | OsRLCK107 | Detail |
| CX3g028865 | 3:8,139,429-8,142,277 | + | C1H3g02943 | C2H3g07201 | LOC_Os03g16760 | Os03g0275100 | - | Detail |
| CX3g026629 | 3:8,151,683-8,154,361 | - | C1H3g20146 | C2H3g02844 | LOC_Os03g16780 | Os03g0275300 | - | Detail |
| CX3g028725 | 3:8,170,592-8,172,547 | - | C1H3g29048 | C2H3g22357 | LOC_Os03g16800 | Os03g0275500 | - | Detail |
| CX3g030952 | 3:8,184,431-8,189,407 | + | C1H3g28405 | C2H3g09736 | LOC_Os03g16824 | Os03g0275900 | - | Detail |
| CX3g029620 | 3:8,228,864-8,230,332 | - | C1H3g20662 | C2H3g10703 | LOC_Os03g16850 | Os03g0276300 | - | Detail |
| CX3g026076 | 3:8,239,420-8,242,414 | + | C1H3g15079 | C2H3g25748 | LOC_Os03g16860 | Os03g0276500 | - | Detail |
| CX3g028681 | 3:8,243,057-8,245,039 | - | C1H3g15631 | C2H3g05747 | LOC_Os03g16870 | Os03g0276600 | - | Detail |
| CX3g027299 | 3:8,246,691-8,247,116 | + | C1H3g26015 | C2H3g19968 | LOC_Os03g16874 | Os03g0276700 | - | Detail |
| CX3g027761 | 3:8,247,566-8,248,730 | - | C1H3g01693 | C2H3g18002 | LOC_Os03g16880 | Os03g0276800 | - | Detail |
| CX3g030385 | 3:8,254,323-8,255,433 | - | C1H3g30543 | C2H3g18002 | LOC_Os03g16880 | Os03g0276800 | - | Detail |
| CX3g030171 | 3:8,255,991-8,260,153 | - | C1H3g16525 | C2H3g17099 | LOC_Os03g16890 | Os03g0276900 | - | Detail |