| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H8g13211 | 8:21,447,034-21,448,143 | - | C1H8g31232 | CX8g054182 | LOC_Os08g39980 | Os08g0510700 | - | Detail |
| C2H8g07448 | 8:21,448,505-21,449,838 | - | C1H8g31232 | CX8g054182 | LOC_Os08g39980 | Os08g0510700 | - | Detail |
| C2H8g25749 | 8:21,452,577-21,453,716 | - | C1H9g12273 | CX8g050917 | LOC_Os08g39990 | Os08g0510800 | - | Detail |
| C2H8g04181 | 8:21,458,968-21,461,660 | + | C1H8g04920 | CX8g052027 | LOC_Os08g40010 | Os08g0510900 | - | Detail |
| C2H8g25618 | 8:21,462,672-21,464,210 | + | C1H8g29844 | CX8g051467 | LOC_Os08g40020 | Os08g0511000 | - | Detail |
| C2H8g09758 | 8:21,469,305-21,471,218 | - | C1H8g08233 | CX8g051129 | LOC_Os08g40030 | Os08g0511200 | OsCUC3 | Detail |
| C2H8g05688 | 8:21,481,365-21,481,889 | - | - | - | LOC_Os08g40060 | Os08g0511400 | - | Detail |
| C2H8g00208 | 8:21,485,693-21,486,067 | - | - | CX9g055236 | LOC_Os08g40080 | Os08g0511600 | - | Detail |
| C2H8g22517 | 8:21,489,438-21,491,523 | - | C1H8g05784 | CX8g054013 | LOC_Os08g40090 | Os08g0511700 | OsIRL4, pi55-1, pi55(t) | Detail |
| C2H8g28624 | 8:21,504,166-21,505,877 | - | C1H8g17789 | CX9g056061 | LOC_Os08g40100 | Os08g0511800 | - | Detail |
| C2H8g22216 | 8:21,507,099-21,510,970 | - | C1H8g17303 | CX8g054792 | LOC_Os08g40110 | Os08g0511900 | - | Detail |
| C2H8g01912 | 8:21,519,134-21,522,061 | + | C1H8g13566 | CX8g051208 | LOC_Os08g40120 | Os08g0512100 | - | Detail |
| C2H8g13020 | 8:21,523,792-21,524,916 | + | C1H8g25106 | CX8g053994 | LOC_Os08g40130 | Os08g0512200 | - | Detail |
| C2H8g21906 | 8:21,525,670-21,529,138 | + | C1H8g00693 | CX8g053394 | LOC_Os08g40140 | Os08g0512300 | - | Detail |
| C2H8g05099 | 8:21,529,454-21,533,802 | - | C1H8g20441 | CX8g053561 | LOC_Os08g40150 | Os08g0512400 | OsAHL16 | Detail |
| C2H8g28028 | 8:21,540,038-21,542,494 | + | C1H8g06615 | CX8g050659 | LOC_Os08g40160 | Os08g0512500 | - | Detail |
| C2H8g01482 | 8:21,543,826-21,545,433 | + | C1H8g24588 | CX8g050792 | LOC_Os08g40170 | Os08g0512600 | CDKB2;1, Orysa;CDKB2;1, OsCDKB2;1, cdc2Os3, Orysa;CDKB;2 | Detail |
| C2H8g01373 | 8:21,550,733-21,555,287 | + | C1H8g03467 | CX8g051014 | LOC_Os08g40180 | Os08g0512700 | - | Detail |
| C2H8g25544 | 8:21,558,129-21,559,746 | + | C1H8g18158 | - | LOC_Os08g40190 | Os08g0512900 | - | Detail |
| C2H8g24125 | 8:21,561,966-21,565,722 | + | C1H8g01845 | CX8g054165 | LOC_Os08g40200 | Os08g0513000 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g025228 | 3:7,916,835-7,919,604 | - | C1H3g28190 | C2H3g30194 | LOC_Os03g16260 | Os03g0269300 | - | Detail |
| CX3g030432 | 3:7,925,550-7,927,940 | + | C1H3g05319 | C2H3g10990 | LOC_Os03g16290 | Os03g0269700 | OsSSR1 | Detail |
| CX3g028676 | 3:7,933,316-7,937,016 | + | C1H3g25495 | C2H3g12278 | LOC_Os03g16334 | Os03g0269900 | - | Detail |
| CX3g030836 | 3:7,942,831-7,943,607 | + | C1H3g15219 | C2H3g26039 | LOC_Os03g16350 | Os03g0270000 | OsAHL7 | Detail |
| CX3g029827 | 3:7,952,103-7,954,047 | - | - | - | LOC_Os03g16369 | Os03g0270200 | - | Detail |
| CX3g031331 | 3:7,954,282-7,954,710 | + | C1H3g05957 | C2H3g23864 | - | Os03g0270300 | - | Detail |
| CX3g029608 | 3:7,961,982-7,963,403 | - | C1H3g05634 | C2H3g17998 | LOC_Os03g16390 | Os03g0270500 | - | Detail |
| CX3g031120 | 3:7,968,237-7,968,470 | + | - | - | - | Os03g0270700 | - | Detail |
| CX3g031177 | 3:7,969,404-7,971,067 | + | C1H3g18450 | C2H3g10987 | LOC_Os03g16400 | Os01g0103800 | - | Detail |
| CX3g029680 | 3:7,971,824-7,972,297 | - | C1H3g20566 | C2H3g15886 | LOC_Os03g16410 | Os03g0270800 | - | Detail |
| CX3g026903 | 3:7,975,398-7,978,221 | + | C1H3g15183 | C2H3g30308 | LOC_Os03g16430 | Os03g0271100 | - | Detail |
| CX3g030405 | 3:7,979,114-7,984,069 | + | C1H3g23817 | C2H3g26882 | LOC_Os03g16440 | Os03g0271200 | - | Detail |
| CX3g027711 | 3:7,985,084-7,986,466 | + | C1H3g23484 | C2H3g19632 | LOC_Os03g16450 | Os03g0271300 | - | Detail |
| CX3g030348 | 3:7,986,969-7,991,100 | - | C1H3g07914 | C2H3g27304 | LOC_Os03g16460 | Os03g0271400 | - | Detail |
| CX3g027827 | 3:7,991,439-7,992,104 | + | C1H3g07286 | C2H3g08754 | LOC_Os03g16470 | Os03g0271500 | - | Detail |
| CX3g027903 | 3:7,995,857-7,996,696 | + | C1H3g24126 | C2H3g12514 | LOC_Os03g16480 | Os03g0271600 | - | Detail |
| CX3g028371 | 3:8,004,093-8,005,430 | + | C1H3g27178 | C2H3g28191 | LOC_Os03g16500 | Os03g0271900 | - | Detail |
| CX3g029063 | 3:8,009,362-8,012,130 | + | C1H3g08714 | C2H3g14243 | LOC_Os03g16570 | Os03g0272300 | OsSDIR1 | Detail |
| CX3g029825 | 3:8,014,649-8,019,336 | + | C1H3g26204 | C2H3g29860 | LOC_Os03g16580 | Os03g0272400 | - | Detail |
| CX3g025184 | 3:8,031,765-8,032,064 | - | C1H3g01466 | C2H3g08510 | LOC_Os03g16600 | Os03g0272900 | - | Detail |