| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g31003 | 1:30,862,727-30,864,175 | + | C2H1g17151 | CX1g004658 | LOC_Os01g59990 | Os01g0815800 | - | Detail |
| C1H1g02777 | 1:30,865,159-30,868,765 | - | C2H1g11561 | CX1g001519 | LOC_Os01g60000 | Os01g0815900 | - | Detail |
| C1H1g09791 | 1:30,869,157-30,870,725 | + | C2H1g13748 | CX1g001573 | LOC_Os01g60010 | Os01g0816000 | - | Detail |
| C1H1g00772 | 1:30,872,324-30,873,477 | - | C2H1g09624 | CX1g005248 | LOC_Os01g60020 | Os01g0816100 | OsNAC4 | Detail |
| C1H1g28423 | 1:30,876,795-30,877,082 | + | - | - | - | - | - | Detail |
| C1H1g15712 | 1:30,885,496-30,901,935 | - | C2H1g09286 | CX1g002744 | LOC_Os01g60040 | Os01g0816400 | - | Detail |
| C1H1g15897 | 1:30,910,322-30,914,693 | - | C2H1g26961 | CX1g002744 | LOC_Os01g60050 | Os01g0816500 | - | Detail |
| C1H1g04794 | 1:30,917,388-30,922,442 | + | C2H1g04146 | CX1g001742 | LOC_Os01g60060 | Os01g0816600 | - | Detail |
| C1H1g24642 | 1:30,925,590-30,927,056 | + | C2H1g24791 | CX1g006929 | LOC_Os01g60080 | Os01g0816700 | - | Detail |
| C1H1g24879 | 1:30,927,149-30,927,451 | + | C2H1g25178 | CX1g006929 | LOC_Os01g60080 | Os01g0816700 | - | Detail |
| C1H1g23182 | 1:30,932,403-30,935,578 | - | C2H1g12383 | CX1g001408 | LOC_Os01g60110 | Os01g0817000 | - | Detail |
| C1H1g20937 | 1:30,938,410-30,941,850 | - | C2H1g27536 | CX1g001908 | LOC_Os01g60120 | Os01g0817100 | - | Detail |
| C1H1g16273 | 1:30,946,537-30,949,653 | + | C2H1g05301 | CX1g005873 | LOC_Os01g60140 | Os01g0817400 | - | Detail |
| C1H1g27130 | 1:30,950,380-30,950,676 | + | - | CX1g006550 | - | - | - | Detail |
| C1H1g15906 | 1:30,951,096-30,951,678 | - | C2H1g04044 | CX1g004355 | - | Os01g0286100 | PIL15, OsPIL15, OsbHLH105 | Detail |
| C1H1g18287 | 1:30,959,654-30,960,304 | + | C2H1g27953 | CX1g005753 | LOC_Os01g60170 | Os01g0817650 | - | Detail |
| C1H1g14583 | 1:30,963,679-30,967,446 | + | C2H1g17170 | CX1g000357 | LOC_Os01g60190 | Os01g0817700 | - | Detail |
| C1H1g28961 | 1:30,967,898-30,971,189 | - | C2H1g22450 | CX1g003723 | LOC_Os01g60200 | Os01g0817800 | - | Detail |
| C1H1g28985 | 1:30,983,428-30,987,645 | + | C2H1g03576 | CX1g005948 | LOC_Os01g60230 | Os01g0818000 | - | Detail |
| C1H1g10378 | 1:30,991,363-30,992,829 | + | C2H1g16399 | CX1g005236 | - | Os01g0818100 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g027459 | 3:7,795,580-7,796,056 | - | C1H3g16482 | C2H3g29477 | LOC_Os03g16030 | Os03g0267000 | OsMSR3, OsHsp18.0-CI | Detail |
| CX3g026761 | 3:7,796,975-7,797,439 | + | C1H3g06066 | C2H3g11139 | LOC_Os03g16020 | Os03g0266900 | OsHsp17.4 | Detail |
| CX3g027615 | 3:7,800,860-7,801,333 | - | C1H3g14734 | C2H3g11139 | LOC_Os03g16040 | Os03g0267200 | sHSP17.7, OSHSP17.7 | Detail |
| CX3g026398 | 3:7,803,567-7,805,101 | - | C1H3g06904 | C2H3g24515 | LOC_Os03g16050 | Os03g0267300 | - | Detail |
| CX3g028809 | 3:7,813,124-7,813,300 | - | - | - | - | - | - | Detail |
| CX3g030412 | 3:7,814,021-7,816,826 | + | C1H3g31620 | C2H3g00254 | LOC_Os03g16060 | Os03g0267500 | - | Detail |
| CX3g027859 | 3:7,817,563-7,820,358 | - | C1H3g27649 | C2H3g01773 | LOC_Os03g16070 | Os03g0267600 | - | Detail |
| CX3g024983 | 3:7,829,562-7,831,990 | + | C1H3g07562 | C2H3g22656 | LOC_Os03g16080 | Os03g0267700 | - | Detail |
| CX3g027806 | 3:7,833,595-7,837,886 | - | C1H3g17372 | C2H3g06739 | LOC_Os03g16090 | Os03g0267800 | HDR3 | Detail |
| CX3g026311 | 3:7,846,063-7,849,610 | + | C1H3g04069 | C2H3g07700 | LOC_Os03g16110 | Os03g0268000 | - | Detail |
| CX3g028752 | 3:7,854,570-7,858,156 | - | C1H3g00060 | C2H3g30042 | LOC_Os03g16120 | Os03g0268100 | - | Detail |
| CX3g026924 | 3:7,858,871-7,859,332 | + | - | - | - | - | - | Detail |
| CX3g026518 | 3:7,860,844-7,866,054 | - | C1H3g17480 | C2H3g28116 | LOC_Os03g16130 | Os03g0268200 | - | Detail |
| CX3g027084 | 3:7,867,746-7,870,367 | - | C1H3g03581 | C2H3g23231 | LOC_Os03g16140 | Os03g0268300 | - | Detail |
| CX3g026984 | 3:7,874,300-7,876,089 | - | C1H3g26709 | C2H3g04060 | LOC_Os03g16150 | Os03g0268400 | - | Detail |
| CX3g029114 | 3:7,889,017-7,890,583 | - | C1H3g06011 | C2H3g09098 | LOC_Os03g16170 | Os03g0268600 | - | Detail |
| CX3g028276 | 3:7,901,098-7,902,144 | - | - | C2H12g05325 | - | - | - | Detail |
| CX3g025828 | 3:7,903,208-7,903,432 | - | C1H3g13406 | - | - | - | - | Detail |
| CX3g025893 | 3:7,904,297-7,906,570 | - | C1H3g02392 | C2H3g08488 | LOC_Os03g16210 | Os03g0268900 | - | Detail |
| CX3g030778 | 3:7,914,295-7,915,994 | - | C1H3g14634 | C2H3g13848 | LOC_Os03g16230 | Os03g0269100 | - | Detail |