| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g05410 | 3:2,813,014-2,821,309 | + | C1H3g11682 | CX3g027922 | LOC_Os03g06510 | Os03g0161100 | - | Detail |
| C2H3g11481 | 3:2,821,809-2,827,231 | - | C1H3g12948 | CX3g029615 | LOC_Os03g06520 | Os03g0161200 | - | Detail |
| C2H3g04338 | 3:2,839,593-2,841,892 | + | C1H3g19950 | CX3g031150 | LOC_Os03g06570 | Os03g0161400 | - | Detail |
| C2H3g04897 | 3:2,849,650-2,852,046 | + | C1H3g16884 | CX3g029485 | LOC_Os03g06580 | Os03g0161500 | - | Detail |
| C2H3g20671 | 3:2,857,405-2,857,866 | - | C1H3g31680 | CX3g029738 | LOC_Os03g06610 | Os03g0161600 | OsEPFL6 | Detail |
| C2H3g16543 | 3:2,873,484-2,875,711 | + | C1H3g19723 | CX3g029835 | LOC_Os03g06620 | Os03g0161800 | - | Detail |
| C2H3g18983 | 3:2,877,424-2,879,447 | + | C1H3g17239 | CX3g029527 | LOC_Os03g06630 | Os03g0795900 | HSFA2E, HSfA2e, OsHsfA2e, OsHsf-12, HSF12 | Detail |
| C2H3g18594 | 3:2,887,211-2,888,499 | + | - | - | - | - | - | Detail |
| C2H3g18217 | 3:2,889,436-2,891,957 | + | C1H3g19807 | CX3g030288 | LOC_Os03g06654 | Os03g0162000 | COW1, OsCOW1, oscow1, OsYUC8, NAL7, OsYUCCA8, FMO, OsFMO(t) | Detail |
| C2H3g01853 | 3:2,903,303-2,903,873 | + | C1H3g07386 | CX3g030521 | LOC_Os03g06670 | Os03g0162200 | - | Detail |
| C2H3g21314 | 3:2,911,394-2,912,892 | + | C1H3g24759 | CX3g025819 | LOC_Os03g06680 | Os03g0162500 | OsDUF50604 | Detail |
| C2H3g14410 | 3:2,930,448-2,934,898 | + | C1H3g16348 | CX3g029826 | LOC_Os03g06705 | Os03g0162800 | - | Detail |
| C2H3g28634 | 3:2,935,603-2,936,034 | + | C1H3g31273 | - | - | - | - | Detail |
| C2H3g14053 | 3:2,936,052-2,938,523 | + | C1H3g16422 | CX3g027686 | LOC_Os03g06710 | Os03g0162900 | - | Detail |
| C2H3g03063 | 3:2,941,941-2,943,677 | + | C1H3g04672 | - | - | Os03g0163000 | - | Detail |
| C2H3g15393 | 3:2,944,725-2,952,303 | + | C1H3g10390 | CX3g025042 | LOC_Os03g06720 | Os03g0163100 | - | Detail |
| C2H3g06714 | 3:2,952,491-2,953,976 | + | C1H3g23541 | CX3g025042 | LOC_Os03g06730 | Os03g0163200 | - | Detail |
| C2H3g22693 | 3:2,954,872-2,959,579 | + | C1H3g17347 | CX3g026090 | LOC_Os03g06740 | Os03g0163300 | - | Detail |
| C2H3g01887 | 3:2,960,166-2,961,935 | - | C1H3g06657 | CX3g029299 | LOC_Os03g06750 | Os03g0163400 | - | Detail |
| C2H3g29355 | 3:2,964,329-2,966,695 | + | C1H3g03297 | CX3g026455 | LOC_Os03g06760 | Os03g0163500 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g025411 | 3:7,691,870-7,693,315 | - | C1H3g19306 | C2H3g02876 | LOC_Os03g15800 | Os03g0264700 | - | Detail |
| CX3g030279 | 3:7,693,890-7,701,588 | - | C1H3g00653 | C2H3g07031 | LOC_Os03g15810 | Os03g0264800 | - | Detail |
| CX3g026411 | 3:7,710,625-7,713,878 | + | C1H3g22318 | C2H3g21284 | LOC_Os03g15840 | Os03g0265100 | PLS2, OsSQD2.3 | Detail |
| CX3g026305 | 3:7,715,360-7,716,741 | - | C1H3g16209 | C2H3g07665 | LOC_Os03g15850 | Os03g0265200 | - | Detail |
| CX3g029962 | 3:7,719,876-7,722,596 | + | C1H3g16456 | C2H3g25611 | LOC_Os03g15860 | Os03g0265300 | - | Detail |
| CX3g031298 | 3:7,723,649-7,725,692 | + | C1H3g27080 | C2H3g15049 | LOC_Os03g15870 | Os03g0265400 | - | Detail |
| CX3g030118 | 3:7,731,195-7,731,407 | + | - | - | - | - | - | Detail |
| CX3g025400 | 3:7,732,135-7,732,440 | - | C1H3g11550 | C2H3g04912 | LOC_Os03g13530 | Os03g0204300 | - | Detail |
| CX3g025675 | 3:7,736,413-7,738,669 | + | C1H3g26269 | C2H3g28537 | LOC_Os03g15880 | Os03g0265500 | - | Detail |
| CX3g026951 | 3:7,740,093-7,742,965 | - | C1H3g21286 | C2H3g24360 | LOC_Os03g15890 | Os03g0265600 | - | Detail |
| CX3g030826 | 3:7,745,674-7,755,621 | + | C1H3g15389 | C2H3g26554 | LOC_Os03g15900 | Os03g0265700 | - | Detail |
| CX3g031044 | 3:7,756,654-7,757,055 | + | C1H3g08685 | C2H3g04049 | LOC_Os03g15910 | Os03g0265800 | - | Detail |
| CX3g030541 | 3:7,757,574-7,758,657 | - | C1H3g02041 | C2H3g14157 | LOC_Os03g15920 | Os03g0265900 | - | Detail |
| CX3g030784 | 3:7,759,123-7,762,318 | + | C1H3g28556 | C2H3g30510 | LOC_Os03g15930 | Os03g0266000 | - | Detail |
| CX3g027155 | 3:7,765,249-7,766,896 | + | C1H3g03702 | C2H3g30669 | LOC_Os03g15940 | Os03g0266100 | - | Detail |
| CX3g027025 | 3:7,768,130-7,772,385 | - | C1H3g31409 | C2H3g06090 | LOC_Os03g15950 | Os03g0266200 | - | Detail |
| CX3g028400 | 3:7,773,068-7,773,544 | + | C1H3g24708 | C2H3g29477 | LOC_Os03g16030 | Os03g0266300 | - | Detail |
| CX3g026523 | 3:7,777,065-7,780,507 | + | - | - | LOC_Os03g15990 | - | - | Detail |
| CX3g028150 | 3:7,782,518-7,786,776 | + | C1H3g06417 | C2H3g22167 | LOC_Os03g16000 | Os03g0266700 | - | Detail |
| CX3g028162 | 3:7,790,492-7,794,903 | + | C1H3g07398 | C2H3g11836 | LOC_Os03g16010 | Os03g0266800 | - | Detail |