| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g21876 | 1:23,172,459-23,176,288 | + | C2H1g05185 | CX1g003646 | LOC_Os01g45550 | Os01g0643300 | - | Detail |
| C1H1g25133 | 1:23,187,095-23,190,153 | - | C2H1g02636 | CX1g003628 | LOC_Os01g45570 | Os01g0643600 | SGD2, OsHOX3, SGD2/OsHOX3 | Detail |
| C1H1g17824 | 1:23,205,449-23,210,294 | - | C2H1g17274 | CX1g005269 | LOC_Os01g45620 | Os01g0643800 | - | Detail |
| C1H1g01905 | 1:23,209,454-23,209,980 | + | - | - | - | - | - | Detail |
| C1H1g14596 | 1:23,213,913-23,215,505 | + | C2H1g01755 | CX1g004663 | LOC_Os01g45640 | Os01g0644000 | - | Detail |
| C1H1g08154 | 1:23,237,663-23,238,762 | - | C2H1g00660 | CX1g003016 | LOC_Os01g45730 | Os01g0645000 | - | Detail |
| C1H1g06404 | 1:23,245,695-23,252,455 | + | C2H1g06994 | CX1g001972 | LOC_Os01g45750 | Os01g0645200 | - | Detail |
| C1H1g20018 | 1:23,273,241-23,275,506 | + | C2H1g23683 | CX1g005018 | LOC_Os01g45760 | Os01g0645400 | YUCCA1, OsYUCCA1 | Detail |
| C1H1g13313 | 1:23,296,402-23,298,910 | + | C2H1g13756 | CX1g004670 | LOC_Os01g45840 | Os01g0646000 | - | Detail |
| C1H1g03849 | 1:23,322,905-23,323,534 | + | C2H1g20334 | CX1g004039 | LOC_Os01g45900 | Os01g0647000 | - | Detail |
| C1H1g20418 | 1:23,323,788-23,324,312 | + | C2H1g20334 | CX1g004039 | LOC_Os01g45900 | Os01g0647000 | - | Detail |
| C1H1g26424 | 1:23,326,229-23,330,363 | - | C2H1g22575 | CX1g007130 | LOC_Os01g45910 | Os01g0647100 | - | Detail |
| C1H1g25052 | 1:23,346,621-23,347,299 | + | C2H1g13107 | CX1g002028 | - | - | - | Detail |
| C1H1g27497 | 1:23,370,893-23,374,582 | + | C2H1g08187 | CX1g007062 | LOC_Os01g45960 | Os01g0647700 | - | Detail |
| C1H1g28834 | 1:23,376,334-23,382,665 | - | C2H1g18846 | CX1g001110 | LOC_Os01g45990 | Os01g0648000 | OsAKT1, Os-AKT1 | Detail |
| C1H1g12681 | 1:23,400,853-23,403,569 | + | C2H1g00912 | CX1g003797 | LOC_Os01g46020 | Os01g0648500 | - | Detail |
| C1H1g06277 | 1:23,404,154-23,405,706 | + | C2H1g01299 | CX1g003920 | LOC_Os01g46030 | Os01g0648600 | MAK2 | Detail |
| C1H1g05715 | 1:23,406,335-23,410,389 | - | C2H1g27065 | CX1g001434 | LOC_Os01g46040 | Os01g0648700 | - | Detail |
| C1H1g20458 | 1:23,414,710-23,421,129 | + | C2H1g30673 | CX1g006886 | LOC_Os01g46060 | Os01g0649000 | - | Detail |
| C1H1g04276 | 1:23,422,062-23,425,981 | + | C2H1g05562 | CX1g003803 | LOC_Os01g46070 | Os01g0649100 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g025411 | 3:7,691,870-7,693,315 | - | C1H3g19306 | C2H3g02876 | LOC_Os03g15800 | Os03g0264700 | - | Detail |
| CX3g030279 | 3:7,693,890-7,701,588 | - | C1H3g00653 | C2H3g07031 | LOC_Os03g15810 | Os03g0264800 | - | Detail |
| CX3g026411 | 3:7,710,625-7,713,878 | + | C1H3g22318 | C2H3g21284 | LOC_Os03g15840 | Os03g0265100 | PLS2, OsSQD2.3 | Detail |
| CX3g026305 | 3:7,715,360-7,716,741 | - | C1H3g16209 | C2H3g07665 | LOC_Os03g15850 | Os03g0265200 | - | Detail |
| CX3g029962 | 3:7,719,876-7,722,596 | + | C1H3g16456 | C2H3g25611 | LOC_Os03g15860 | Os03g0265300 | - | Detail |
| CX3g031298 | 3:7,723,649-7,725,692 | + | C1H3g27080 | C2H3g15049 | LOC_Os03g15870 | Os03g0265400 | - | Detail |
| CX3g030118 | 3:7,731,195-7,731,407 | + | - | - | - | - | - | Detail |
| CX3g025400 | 3:7,732,135-7,732,440 | - | C1H3g11550 | C2H3g04912 | LOC_Os03g13530 | Os03g0204300 | - | Detail |
| CX3g025675 | 3:7,736,413-7,738,669 | + | C1H3g26269 | C2H3g28537 | LOC_Os03g15880 | Os03g0265500 | - | Detail |
| CX3g026951 | 3:7,740,093-7,742,965 | - | C1H3g21286 | C2H3g24360 | LOC_Os03g15890 | Os03g0265600 | - | Detail |
| CX3g030826 | 3:7,745,674-7,755,621 | + | C1H3g15389 | C2H3g26554 | LOC_Os03g15900 | Os03g0265700 | - | Detail |
| CX3g031044 | 3:7,756,654-7,757,055 | + | C1H3g08685 | C2H3g04049 | LOC_Os03g15910 | Os03g0265800 | - | Detail |
| CX3g030541 | 3:7,757,574-7,758,657 | - | C1H3g02041 | C2H3g14157 | LOC_Os03g15920 | Os03g0265900 | - | Detail |
| CX3g030784 | 3:7,759,123-7,762,318 | + | C1H3g28556 | C2H3g30510 | LOC_Os03g15930 | Os03g0266000 | - | Detail |
| CX3g027155 | 3:7,765,249-7,766,896 | + | C1H3g03702 | C2H3g30669 | LOC_Os03g15940 | Os03g0266100 | - | Detail |
| CX3g027025 | 3:7,768,130-7,772,385 | - | C1H3g31409 | C2H3g06090 | LOC_Os03g15950 | Os03g0266200 | - | Detail |
| CX3g028400 | 3:7,773,068-7,773,544 | + | C1H3g24708 | C2H3g29477 | LOC_Os03g16030 | Os03g0266300 | - | Detail |
| CX3g026523 | 3:7,777,065-7,780,507 | + | - | - | LOC_Os03g15990 | - | - | Detail |
| CX3g028150 | 3:7,782,518-7,786,776 | + | C1H3g06417 | C2H3g22167 | LOC_Os03g16000 | Os03g0266700 | - | Detail |
| CX3g028162 | 3:7,790,492-7,794,903 | + | C1H3g07398 | C2H3g11836 | LOC_Os03g16010 | Os03g0266800 | - | Detail |