| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H12g18535 | 12:8,599,848-8,603,542 | - | C2H12g03927 | CX12g017377 | LOC_Os12g17880 | Os12g0277000 | - | Detail |
| C1H12g24761 | 12:8,640,341-8,645,737 | - | C2H12g28494 | CX12g017705 | LOC_Os12g17900 | Os12g0277400 | - | Detail |
| C1H12g06371 | 12:8,651,726-8,656,037 | + | C2H12g12318 | CX12g016191 | LOC_Os12g17910 | Os12g0277500 | - | Detail |
| C1H12g01376 | 12:8,663,798-8,664,169 | - | C2H12g11764 | CX12g018723 | LOC_Os12g17930 | Os12g0277900 | - | Detail |
| C1H12g09603 | 12:8,675,307-8,676,306 | - | C2H12g20076 | CX12g016247 | LOC_Os12g17950 | Os12g0277900 | - | Detail |
| C1H12g04705 | 12:8,687,683-8,689,252 | - | - | - | - | - | - | Detail |
| C1H12g22417 | 12:8,717,746-8,721,032 | - | C2H12g07192 | CX12g018234 | LOC_Os12g18070 | - | - | Detail |
| C1H12g24393 | 12:8,731,397-8,742,257 | - | C2H12g14594 | CX12g016938 | LOC_Os12g18110 | Os12g0278700 | - | Detail |
| C1H12g12740 | 12:8,750,884-8,758,742 | - | C2H12g02522 | CX12g017296 | LOC_Os12g18120 | Os12g0278800 | - | Detail |
| C1H12g06841 | 12:8,773,539-8,781,544 | + | C2H12g09689 | CX12g016351 | LOC_Os12g18140 | Os12g0279000 | - | Detail |
| C1H12g22097 | 12:8,783,663-8,793,817 | - | C2H12g26090 | CX12g018140 | LOC_Os12g18150 | Os12g0279100 | - | Detail |
| C1H12g00021 | 12:8,814,222-8,822,818 | - | C2H12g22060 | CX12g017706 | LOC_Os12g18200 | Os12g0279600 | - | Detail |
| C1H12g28480 | 12:8,871,174-8,872,544 | + | C2H12g06640 | CX12g016081 | LOC_Os12g18450 | Os12g0282400 | - | Detail |
| C1H12g12461 | 12:8,880,545-8,883,944 | - | C2H12g30569 | CX12g017409 | LOC_Os12g18374 | Os12g0281600 | - | Detail |
| C1H12g08537 | 12:8,887,978-8,888,964 | - | C2H12g15312 | CX12g017409 | LOC_Os12g18374 | Os12g0281600 | - | Detail |
| C1H12g11746 | 12:8,903,686-8,908,295 | + | C2H12g10872 | CX12g016617 | LOC_Os12g18360 | Os12g0281300 | Pi-ta | Detail |
| C1H12g17326 | 12:8,911,635-8,911,967 | + | C2H12g17710 | CX12g016617 | LOC_Os12g18220 | Os12g0280050 | - | Detail |
| C1H12g13301 | 12:8,940,516-8,945,908 | - | C2H12g22248 | CX12g016673 | LOC_Os12g18530 | Os12g0283100 | - | Detail |
| C1H12g10664 | 12:8,954,074-8,954,466 | + | - | - | - | - | - | Detail |
| C1H12g08210 | 12:9,014,705-9,021,118 | - | C2H12g13366 | CX12g018758 | LOC_Os12g18630 | Os12g0283800 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g028948 | 3:7,550,581-7,553,712 | + | C1H3g00077 | C2H3g12029 | LOC_Os03g15550 | Os03g0262000 | - | Detail |
| CX3g029180 | 3:7,559,181-7,562,049 | + | C1H3g09649 | C2H3g02245 | LOC_Os03g15560 | Os03g0262100 | - | Detail |
| CX3g026565 | 3:7,563,897-7,567,543 | - | C1H3g05616 | C2H3g27971 | LOC_Os03g15570 | Os03g0262200 | - | Detail |
| CX3g027558 | 3:7,571,923-7,585,692 | - | C1H3g16946 | C2H3g16143 | LOC_Os03g15580 | Os03g0262300 | - | Detail |
| CX3g026755 | 3:7,587,893-7,590,410 | - | C1H3g00248 | C2H3g26303 | LOC_Os03g15590 | Os03g0262400 | - | Detail |
| CX3g027849 | 3:7,593,592-7,594,082 | - | C1H3g31150 | - | LOC_Os03g15110 | - | - | Detail |
| CX3g029077 | 3:7,598,282-7,599,087 | + | C1H3g17162 | C2H3g04568 | LOC_Os03g15630 | Os03g0262700 | - | Detail |
| CX3g031108 | 3:7,603,938-7,608,621 | + | C1H3g28720 | C2H3g27525 | LOC_Os03g15650 | Os03g0262900 | GLUP6/GEF, OsVPS9A, VPS9a, GPA2/VPS9a, GPA2, GLUP6 | Detail |
| CX3g028305 | 3:7,610,487-7,611,248 | - | C1H3g05394 | C2H3g13896 | LOC_Os03g15660 | Os03g0263000 | - | Detail |
| CX3g027760 | 3:7,629,312-7,631,060 | + | C1H3g03212 | C2H3g08920 | LOC_Os03g15680 | Os03g0263300 | NSP2, Os NSP2, NSP2 | Detail |
| CX3g028003 | 3:7,634,161-7,637,775 | + | C1H3g04873 | C2H3g28518 | LOC_Os03g15690 | Os03g0263400 | - | Detail |
| CX3g030022 | 3:7,638,566-7,641,021 | - | C1H3g22836 | C2H3g08217 | LOC_Os03g15700 | Os03g0263500 | - | Detail |
| CX3g031268 | 3:7,642,586-7,644,165 | - | C1H3g14620 | C2H3g20978 | LOC_Os03g15710 | Os03g0263600 | OsSTRL2 | Detail |
| CX3g028260 | 3:7,645,899-7,648,978 | + | C1H3g20320 | C2H3g30231 | LOC_Os03g15720 | Os03g0263700 | - | Detail |
| CX3g027745 | 3:7,651,349-7,654,002 | + | C1H3g15450 | C2H3g12908 | LOC_Os03g15730 | Os03g0263800 | - | Detail |
| CX3g026739 | 3:7,657,245-7,659,791 | + | C1H3g29175 | C2H3g16128 | LOC_Os03g15740 | Os03g0263900 | - | Detail |
| CX3g027842 | 3:7,662,413-7,665,500 | - | C1H3g24070 | C2H3g07359 | LOC_Os03g15750 | Os03g0264000 | - | Detail |
| CX3g030764 | 3:7,673,841-7,676,514 | + | C1H3g19617 | C2H3g24590 | LOC_Os03g15770 | Os03g0264300 | - | Detail |
| CX3g029488 | 3:7,678,076-7,682,154 | - | C1H3g02519 | C2H3g11898 | LOC_Os03g15780 | Os03g0264400 | - | Detail |
| CX3g027532 | 3:7,686,955-7,688,328 | - | C1H3g09016 | C2H3g27599 | LOC_Os03g15790 | Os03g0264600 | - | Detail |