| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g03565 | 3:27,757,241-27,762,050 | - | C2H3g30083 | CX3g030086 | LOC_Os03g51620 | Os03g0726300 | - | Detail |
| C1H3g02226 | 3:27,770,845-27,773,599 | + | C2H3g21290 | CX3g025544 | LOC_Os03g51640 | Os03g0726400 | - | Detail |
| C1H3g17376 | 3:27,774,201-27,779,758 | - | C2H3g14903 | CX3g026178 | LOC_Os03g51650 | Os03g0726500 | - | Detail |
| C1H3g20845 | 3:27,796,136-27,796,740 | - | C2H3g08813 | CX3g028096 | LOC_Os03g51660 | Os03g0726700 | TAC3 | Detail |
| C1H3g06495 | 3:27,798,225-27,803,096 | - | C2H3g26898 | CX3g027385 | LOC_Os03g51670 | Os03g0726800 | - | Detail |
| C1H3g20532 | 3:27,805,979-27,808,428 | - | C2H3g29132 | - | LOC_Os03g51680 | Os03g0726900 | - | Detail |
| C1H3g31203 | 3:27,809,897-27,819,332 | - | C2H3g04769 | CX3g029433 | LOC_Os03g51690 | Os03g0673000 | - | Detail |
| C1H3g28999 | 3:27,834,496-27,836,232 | + | C2H3g17627 | CX3g029277 | LOC_Os03g51700 | Os03g0727100 | - | Detail |
| C1H3g18589 | 3:27,836,841-27,839,340 | - | C2H3g26829 | CX3g027566 | LOC_Os03g51710 | Os03g0673000 | - | Detail |
| C1H3g28804 | 3:27,842,113-27,842,849 | - | C2H3g16078 | CX3g027566 | LOC_Os03g51710 | Os03g0727200 | OSH3 | Detail |
| C1H3g29743 | 3:27,843,063-27,843,350 | - | C2H3g10133 | CX3g029433 | LOC_Os03g51710 | Os03g0727200 | OSH3 | Detail |
| C1H3g10075 | 3:27,866,273-27,868,561 | - | C2H3g07488 | CX3g027050 | LOC_Os03g51740 | Os03g0727600 | ACS1, ACC1*, OsACS1, Os-ACS1, ACC1 | Detail |
| C1H3g08935 | 3:27,895,355-27,902,228 | - | C2H3g29705 | CX3g031106 | LOC_Os03g51790 | Os03g0727900 | - | Detail |
| C1H3g03486 | 3:27,906,842-27,909,468 | + | C2H3g15707 | CX3g025416 | LOC_Os03g51830 | Os03g0728100 | - | Detail |
| C1H3g05198 | 3:27,919,671-27,921,516 | - | C2H3g03478 | CX3g027150 | LOC_Os03g51880 | Os03g0728600 | - | Detail |
| C1H3g06505 | 3:27,927,520-27,927,825 | - | C2H3g14472 | - | LOC_Os03g51890 | - | - | Detail |
| C1H3g18395 | 3:27,931,998-27,939,296 | - | C2H3g03813 | CX3g026995 | LOC_Os03g51890 | - | - | Detail |
| C1H3g26338 | 3:27,941,344-27,943,020 | - | C2H3g06913 | CX3g030922 | LOC_Os03g56630 | Os03g0181600 | - | Detail |
| C1H3g00993 | 3:27,946,183-27,954,698 | + | C2H3g12518 | CX3g028728 | LOC_Os03g51900 | Os03g0728800 | - | Detail |
| C1H3g31891 | 3:27,955,692-27,959,509 | - | C2H3g09824 | CX3g029342 | LOC_Os03g51910 | Os03g0728900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g030425 | 3:7,102,229-7,102,751 | - | C1H3g22396 | C2H3g07197 | - | Os03g0251800 | - | Detail |
| CX3g028657 | 3:7,102,791-7,102,967 | + | - | C2H3g10564 | - | Os03g0199200 | - | Detail |
| CX3g028408 | 3:7,106,916-7,107,974 | - | C1H3g11496 | C2H3g07863 | LOC_Os03g14730 | Os03g0252100 | DIP12, OsDIP12 | Detail |
| CX3g026977 | 3:7,125,564-7,125,764 | - | - | - | - | Os04g0549350 | - | Detail |
| CX3g025353 | 3:7,137,812-7,143,986 | + | C1H3g27328 | C2H3g26671 | LOC_Os03g14790 | Os03g0789466 | - | Detail |
| CX3g029321 | 3:7,144,860-7,148,874 | - | C1H3g10342 | C2H3g27873 | LOC_Os03g14800 | Os03g0252800 | - | Detail |
| CX3g026810 | 3:7,154,346-7,154,921 | - | C1H3g03427 | C2H3g05415 | LOC_Os03g14810 | Os03g0252900 | - | Detail |
| CX3g025241 | 3:7,161,309-7,165,343 | - | C1H3g13989 | C2H3g20389 | - | Os03g0253100 | - | Detail |
| CX3g029104 | 3:7,175,224-7,176,756 | + | C1H3g21796 | C2H3g29944 | LOC_Os03g14840 | Os03g0253200 | - | Detail |
| CX3g029003 | 3:7,190,607-7,191,905 | - | C1H3g30447 | C2H3g07742 | LOC_Os03g14860 | Os03g0253500 | - | Detail |
| CX3g028867 | 3:7,195,298-7,196,311 | - | C1H3g10348 | C2H3g06446 | LOC_Os03g14880 | Os03g0253600 | - | Detail |
| CX3g029179 | 3:7,205,085-7,207,069 | - | C1H3g10348 | C2H3g06446 | LOC_Os03g14880 | Os03g0253600 | - | Detail |
| CX3g030866 | 3:7,217,950-7,218,322 | + | - | - | - | - | - | Detail |
| CX3g029243 | 3:7,219,038-7,222,462 | - | C1H3g17610 | C2H3g12053 | LOC_Os03g14900 | Os03g0254000 | - | Detail |
| CX3g026384 | 3:7,222,881-7,223,036 | - | - | - | - | Os01g0728000 | - | Detail |
| CX3g028413 | 3:7,225,527-7,227,388 | + | C1H3g15353 | C2H3g19284 | LOC_Os03g14910 | Os03g0254200 | - | Detail |
| CX3g025235 | 3:7,228,050-7,229,153 | + | C1H3g13729 | C2H3g17074 | LOC_Os03g14915 | - | - | Detail |
| CX3g030223 | 3:7,230,716-7,231,168 | - | C1H5g28432 | C2H5g05784 | - | - | - | Detail |
| CX3g027887 | 3:7,239,948-7,241,424 | + | C1H3g15012 | C2H3g07624 | LOC_Os03g14950 | Os03g0254400 | - | Detail |
| CX3g029818 | 3:7,246,265-7,246,543 | - | C1H3g14658 | C2H3g23799 | - | - | - | Detail |