| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g19834 | 2:25,897,490-25,898,188 | + | C1H2g17371 | CX2g019917 | LOC_Os02g45880 | Os02g0684000 | - | Detail |
| C2H2g12350 | 2:25,906,290-25,907,369 | - | C1H2g00614 | CX2g020719 | LOC_Os02g45890 | Os02g0684100 | - | Detail |
| C2H2g27051 | 2:25,916,250-25,919,973 | - | C1H2g03932 | CX2g020860 | LOC_Os02g45910 | Os02g0684150 | OsDNA2_15 | Detail |
| C2H2g04078 | 2:25,923,590-25,928,192 | + | C1H2g09273 | CX2g021780 | LOC_Os02g45920 | Os02g0684300 | - | Detail |
| C2H2g07890 | 2:25,928,444-25,929,087 | - | C1H2g23248 | CX2g023573 | LOC_Os02g45930 | Os02g0684400 | - | Detail |
| C2H2g23208 | 2:25,933,967-25,934,278 | - | C1H2g07518 | CX2g023547 | LOC_Os02g45940 | Os02g0684500 | - | Detail |
| C2H2g03417 | 2:25,934,838-25,937,935 | + | C1H2g17890 | CX2g023866 | LOC_Os02g45950 | Os02g0684600 | - | Detail |
| C2H2g24497 | 2:25,938,557-25,939,423 | + | C1H2g27881 | CX2g019320 | - | - | - | Detail |
| C2H2g17403 | 2:25,946,401-25,952,525 | + | C1H2g27343 | CX2g023375 | LOC_Os02g45980 | Os02g0684900 | - | Detail |
| C2H2g16948 | 2:25,953,171-25,953,797 | + | - | - | - | - | - | Detail |
| C2H2g07817 | 2:25,957,041-25,957,384 | + | C1H2g11465 | CX7g047983 | - | Os02g0117400 | - | Detail |
| C2H2g27686 | 2:25,963,024-25,965,649 | - | C1H2g24305 | CX2g019726 | LOC_Os02g46030 | Os02g0685200 | OsMyb1R, LHY-like_chr.2, CMYB1 | Detail |
| C2H2g27892 | 2:25,976,877-25,979,425 | - | C1H2g27920 | CX2g023473 | LOC_Os02g46080 | Os02g0685600 | - | Detail |
| C2H2g03411 | 2:25,981,902-25,987,049 | + | C1H2g28250 | CX2g020113 | LOC_Os02g46090 | Os02g0685900 | OsCPK5 | Detail |
| C2H2g19134 | 2:25,991,362-25,991,931 | - | C1H2g26668 | CX2g020098 | LOC_Os02g46100 | Os02g0686100 | OsATL32 | Detail |
| C2H2g06457 | 2:25,999,464-26,003,538 | - | C1H2g04547 | CX2g020840 | LOC_Os02g46120 | Os02g0686300 | - | Detail |
| C2H2g09278 | 2:26,003,711-26,008,957 | + | C1H2g29736 | CX2g022035 | LOC_Os02g46130 | Os02g0686400 | - | Detail |
| C2H2g01630 | 2:26,011,921-26,012,752 | + | C1H2g13130 | CX2g023233 | LOC_Os02g46140 | Os02g0686500 | - | Detail |
| C2H2g28721 | 2:26,013,006-26,017,407 | - | C1H2g25245 | CX2g022938 | LOC_Os02g46150 | Os02g0686600 | - | Detail |
| C2H2g18789 | 2:26,024,379-26,024,747 | - | C1H2g26309 | CX2g019053 | LOC_Os02g46190 | Os02g0686700 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g029611 | 3:6,964,054-6,965,474 | + | C1H3g21569 | C2H3g26557 | LOC_Os03g14500 | Os03g0249100 | - | Detail |
| CX3g029820 | 3:6,966,032-6,969,362 | + | C1H3g23105 | C2H3g29515 | LOC_Os03g14510 | Os03g0249200 | - | Detail |
| CX3g027233 | 3:6,972,843-6,975,442 | + | C1H3g11399 | C2H3g01671 | LOC_Os03g14520 | Os03g0249300 | - | Detail |
| CX3g027067 | 3:6,976,509-6,978,162 | + | C1H3g07919 | C2H3g21948 | LOC_Os03g14530 | Os03g0249400 | - | Detail |
| CX3g026238 | 3:6,980,939-6,982,393 | + | C1H3g04860 | C2H3g26153 | LOC_Os03g14540 | Os03g0249500 | - | Detail |
| CX3g026981 | 3:6,986,406-6,987,044 | + | C1H3g27147 | C2H3g22650 | LOC_Os03g14550 | Os03g0760800 | GASR1, OsGASR1 | Detail |
| CX3g029164 | 3:6,988,189-6,993,914 | - | C1H3g23129 | C2H3g24679 | LOC_Os03g14560 | Os03g0248300 | - | Detail |
| CX3g027321 | 3:6,999,983-7,000,375 | - | C1H3g11524 | C2H3g02802 | LOC_Os03g14570 | Os03g0249700 | - | Detail |
| CX3g029890 | 3:7,001,287-7,001,436 | - | - | - | - | Os01g0728000 | - | Detail |
| CX3g030341 | 3:7,002,208-7,002,525 | + | - | - | - | - | - | Detail |
| CX3g026249 | 3:7,004,451-7,006,765 | + | C1H3g00105 | C2H3g12837 | LOC_Os03g14580 | Os03g0249900 | - | Detail |
| CX3g029360 | 3:7,007,556-7,010,451 | - | C1H3g21182 | C2H3g11625 | LOC_Os03g14590 | Os03g0250000 | - | Detail |
| CX3g030683 | 3:7,013,164-7,018,173 | - | C1H3g01522 | C2H3g05440 | LOC_Os03g14610 | Os03g0250200 | - | Detail |
| CX3g028936 | 3:7,030,431-7,030,820 | - | C1H3g21317 | C2H3g28271 | LOC_Os03g14630 | Os03g0250400 | - | Detail |
| CX3g028841 | 3:7,037,220-7,037,390 | + | - | - | - | - | - | Detail |
| CX3g025713 | 3:7,071,656-7,072,396 | - | C1H3g21746 | C2H3g12224 | LOC_Os03g14669 | Os03g0251350 | OsHAP5C, OsNF-YC2 | Detail |
| CX3g029617 | 3:7,076,410-7,084,873 | + | C1H3g08441 | C2H3g01417 | LOC_Os03g14690 | Os03g0251500 | - | Detail |
| CX3g027601 | 3:7,085,679-7,088,809 | - | C1H3g08518 | C2H3g22211 | LOC_Os03g14700 | Os03g0251600 | OsC2DP29 | Detail |
| CX3g025283 | 3:7,092,774-7,094,810 | + | C1H3g13884 | C2H3g23862 | LOC_Os03g14710 | Os03g0251700 | - | Detail |
| CX3g029065 | 3:7,097,805-7,101,181 | - | C1H3g19434 | C2H3g08409 | LOC_Os03g14720 | - | - | Detail |