| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g03282 | 4:7,839,230-7,844,356 | + | C2H4g15471 | CX4g033261 | LOC_Os04g17064 | Os04g0244500 | - | Detail |
| C1H4g00844 | 4:7,850,541-7,851,294 | - | C2H4g22629 | CX4g033837 | LOC_Os04g17100 | Os04g0244800 | - | Detail |
| C1H4g07475 | 4:8,045,740-8,052,543 | - | C2H4g17703 | CX4g033363 | LOC_Os04g24430 | Os04g0249500 | OsSUS7 | Detail |
| C1H4g12276 | 4:8,056,878-8,059,164 | - | C2H4g28644 | CX4g032666 | LOC_Os04g17660 | Os04g0249600 | STR6, OsHAC1;2, OsStr6, OsRhST, RLD | Detail |
| C1H4g24988 | 4:8,069,828-8,075,068 | + | C2H11g21202 | - | LOC_Os10g06810 | - | - | Detail |
| C1H4g21643 | 4:8,077,295-8,077,765 | + | C2H4g21737 | - | LOC_Os10g06860 | - | - | Detail |
| C1H4g04939 | 4:8,086,420-8,087,418 | + | C2H4g27695 | CX4g036046 | LOC_Os04g20680 | Os04g0275100 | - | Detail |
| C1H4g18102 | 4:8,090,690-8,091,787 | + | C2H4g27695 | CX4g036046 | LOC_Os04g20680 | Os04g0275100 | - | Detail |
| C1H4g19581 | 4:8,135,934-8,140,510 | + | C2H4g11645 | CX4g035547 | LOC_Os04g20590 | Os04g0274400 | - | Detail |
| C1H4g18833 | 4:8,143,250-8,146,268 | + | C2H4g05451 | CX4g035160 | - | Os04g0274250 | - | Detail |
| C1H4g08176 | 4:8,152,022-8,153,181 | - | C2H4g18722 | CX4g034211 | LOC_Os04g20474 | Os04g0274100 | - | Detail |
| C1H4g21420 | 4:8,161,654-8,166,539 | + | C2H4g17258 | CX4g033803 | LOC_Os04g20560 | Os04g0273900 | - | Detail |
| C1H4g08366 | 4:8,189,994-8,191,980 | - | C2H4g29996 | CX4g031564 | LOC_Os04g20510 | Os04g0273100 | - | Detail |
| C1H4g14718 | 4:8,201,309-8,202,775 | - | C2H4g18722 | CX4g035306 | LOC_Os04g20474 | Os04g0271700 | - | Detail |
| C1H4g12470 | 4:8,220,030-8,221,268 | + | C2H4g07238 | CX4g032938 | LOC_Os04g20420 | Os04g0272400 | - | Detail |
| C1H4g16428 | 4:8,235,986-8,236,796 | + | C2H4g15311 | CX4g033602 | - | Os08g0178900 | - | Detail |
| C1H4g20808 | 4:8,247,439-8,248,917 | + | C2H4g18722 | CX4g035242 | LOC_Os04g20330 | Os04g0271700 | - | Detail |
| C1H4g05138 | 4:8,294,259-8,297,875 | - | C2H4g11411 | CX4g035052 | LOC_Os04g20280 | Os04g0271200 | - | Detail |
| C1H4g20618 | 4:8,308,360-8,321,505 | + | C2H4g16551 | CX4g035775 | LOC_Os04g20270 | Os04g0271000 | - | Detail |
| C1H4g19215 | 4:8,343,277-8,344,833 | + | C2H4g18722 | CX4g035041 | LOC_Os04g20260 | Os04g0270900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g029611 | 3:6,964,054-6,965,474 | + | C1H3g21569 | C2H3g26557 | LOC_Os03g14500 | Os03g0249100 | - | Detail |
| CX3g029820 | 3:6,966,032-6,969,362 | + | C1H3g23105 | C2H3g29515 | LOC_Os03g14510 | Os03g0249200 | - | Detail |
| CX3g027233 | 3:6,972,843-6,975,442 | + | C1H3g11399 | C2H3g01671 | LOC_Os03g14520 | Os03g0249300 | - | Detail |
| CX3g027067 | 3:6,976,509-6,978,162 | + | C1H3g07919 | C2H3g21948 | LOC_Os03g14530 | Os03g0249400 | - | Detail |
| CX3g026238 | 3:6,980,939-6,982,393 | + | C1H3g04860 | C2H3g26153 | LOC_Os03g14540 | Os03g0249500 | - | Detail |
| CX3g026981 | 3:6,986,406-6,987,044 | + | C1H3g27147 | C2H3g22650 | LOC_Os03g14550 | Os03g0760800 | GASR1, OsGASR1 | Detail |
| CX3g029164 | 3:6,988,189-6,993,914 | - | C1H3g23129 | C2H3g24679 | LOC_Os03g14560 | Os03g0248300 | - | Detail |
| CX3g027321 | 3:6,999,983-7,000,375 | - | C1H3g11524 | C2H3g02802 | LOC_Os03g14570 | Os03g0249700 | - | Detail |
| CX3g029890 | 3:7,001,287-7,001,436 | - | - | - | - | Os01g0728000 | - | Detail |
| CX3g030341 | 3:7,002,208-7,002,525 | + | - | - | - | - | - | Detail |
| CX3g026249 | 3:7,004,451-7,006,765 | + | C1H3g00105 | C2H3g12837 | LOC_Os03g14580 | Os03g0249900 | - | Detail |
| CX3g029360 | 3:7,007,556-7,010,451 | - | C1H3g21182 | C2H3g11625 | LOC_Os03g14590 | Os03g0250000 | - | Detail |
| CX3g030683 | 3:7,013,164-7,018,173 | - | C1H3g01522 | C2H3g05440 | LOC_Os03g14610 | Os03g0250200 | - | Detail |
| CX3g028936 | 3:7,030,431-7,030,820 | - | C1H3g21317 | C2H3g28271 | LOC_Os03g14630 | Os03g0250400 | - | Detail |
| CX3g028841 | 3:7,037,220-7,037,390 | + | - | - | - | - | - | Detail |
| CX3g025713 | 3:7,071,656-7,072,396 | - | C1H3g21746 | C2H3g12224 | LOC_Os03g14669 | Os03g0251350 | OsHAP5C, OsNF-YC2 | Detail |
| CX3g029617 | 3:7,076,410-7,084,873 | + | C1H3g08441 | C2H3g01417 | LOC_Os03g14690 | Os03g0251500 | - | Detail |
| CX3g027601 | 3:7,085,679-7,088,809 | - | C1H3g08518 | C2H3g22211 | LOC_Os03g14700 | Os03g0251600 | OsC2DP29 | Detail |
| CX3g025283 | 3:7,092,774-7,094,810 | + | C1H3g13884 | C2H3g23862 | LOC_Os03g14710 | Os03g0251700 | - | Detail |
| CX3g029065 | 3:7,097,805-7,101,181 | - | C1H3g19434 | C2H3g08409 | LOC_Os03g14720 | - | - | Detail |