| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g30367 | 1:37,117,906-37,120,719 | + | C2H3g08891 | CX1g001289 | - | - | - | Detail |
| C1H1g13183 | 1:37,121,582-37,122,052 | - | C2H1g09890 | CX1g000649 | LOC_Os01g72205 | Os01g0950866 | - | Detail |
| C1H1g26489 | 1:37,121,617-37,127,831 | + | C2H1g20439 | CX1g006637 | LOC_Os01g72210 | Os01g0950900 | - | Detail |
| C1H1g26405 | 1:37,126,345-37,133,241 | - | C2H1g27207 | CX1g001273 | LOC_Os01g72220 | Os01g0951000 | OsFY | Detail |
| C1H1g21234 | 1:37,135,362-37,138,578 | + | C2H1g23592 | CX1g004320 | LOC_Os01g72230 | Os01g0951100 | - | Detail |
| C1H1g03325 | 1:37,139,935-37,147,511 | + | C2H1g09816 | CX1g004161 | LOC_Os01g72240 | Os01g0951200 | - | Detail |
| C1H1g25508 | 1:37,148,245-37,149,867 | - | C2H1g26033 | CX1g005013 | LOC_Os01g72260 | Os01g0951500 | CYP94E2, OsCYP94E2 | Detail |
| C1H1g24604 | 1:37,155,802-37,158,937 | - | C2H1g09971 | CX1g006323 | LOC_Os01g72280 | Os01g0951800 | - | Detail |
| C1H1g13711 | 1:37,165,847-37,167,114 | + | C2H1g11533 | CX1g003867 | LOC_Os01g72290 | Os01g0952000 | - | Detail |
| C1H1g12927 | 1:37,172,409-37,173,548 | + | C2H1g04145 | CX1g000435 | LOC_Os01g72300 | Os01g0952100 | - | Detail |
| C1H1g25821 | 1:37,174,340-37,179,867 | + | C2H1g17493 | CX1g001457 | LOC_Os01g72310 | Os01g0952200 | - | Detail |
| C1H1g12568 | 1:37,180,233-37,187,553 | - | C2H1g24796 | CX1g004562 | LOC_Os01g72320 | Os01g0952300 | - | Detail |
| C1H1g26383 | 1:37,204,253-37,206,559 | + | C2H1g17242 | CX1g002915 | LOC_Os01g72330 | Os01g0952500 | RR4, rr4, OsRR4, Rra3, OsRRA3 | Detail |
| C1H1g28344 | 1:37,209,200-37,217,312 | + | C2H1g15970 | CX1g006787 | LOC_Os01g72340 | Os01g0952600 | - | Detail |
| C1H1g14812 | 1:37,220,453-37,226,469 | + | C2H1g26616 | CX1g000308 | LOC_Os01g72350 | Os01g0952700 | - | Detail |
| C1H1g24549 | 1:37,228,408-37,229,073 | + | - | CX1g004115 | LOC_Os01g72360 | Os01g0952900 | - | Detail |
| C1H1g10733 | 1:37,230,068-37,233,918 | - | C2H1g27034 | CX1g006331 | LOC_Os01g72370 | Os01g0952800 | - | Detail |
| C1H1g18549 | 1:37,237,551-37,239,692 | + | C2H1g16159 | CX1g002462 | LOC_Os01g72380 | Os01g0953100 | - | Detail |
| C1H1g01146 | 1:37,241,007-37,242,509 | - | C2H1g14926 | CX1g001591 | LOC_Os01g72420 | Os01g0953500 | - | Detail |
| C1H1g04628 | 1:37,247,452-37,249,749 | - | C2H1g03834 | CX1g003263 | LOC_Os01g72430 | Os01g0953600 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g028730 | 3:6,814,609-6,815,457 | + | - | - | - | - | - | Detail |
| CX3g027333 | 3:6,818,842-6,820,164 | - | C1H3g05479 | C2H3g26968 | LOC_Os03g14210 | Os03g0246100 | - | Detail |
| CX3g029904 | 3:6,842,286-6,842,459 | - | - | - | - | Os02g0188201 | - | Detail |
| CX3g025246 | 3:6,846,052-6,850,887 | + | C1H3g24069 | C2H3g26368 | LOC_Os03g14250 | Os03g0246500 | - | Detail |
| CX3g031327 | 3:6,852,848-6,853,470 | - | - | - | - | Os03g0760100 | - | Detail |
| CX3g031009 | 3:6,856,221-6,864,985 | - | C1H3g04621 | C2H3g20168 | LOC_Os03g14260 | Os03g0246800 | - | Detail |
| CX3g031259 | 3:6,870,324-6,871,957 | - | C1H3g17875 | C2H3g04669 | LOC_Os03g14270 | Os03g0246900 | - | Detail |
| CX3g024987 | 3:6,878,403-6,883,733 | - | C1H3g11721 | C2H3g12251 | LOC_Os03g14280 | Os03g0247000 | - | Detail |
| CX3g025549 | 3:6,886,408-6,888,360 | + | C1H3g04193 | C2H3g19476 | LOC_Os03g14290 | Os03g0247100 | - | Detail |
| CX3g027071 | 3:6,897,590-6,898,970 | + | C1H3g20245 | C2H3g03215 | LOC_Os03g14310 | Os03g0247300 | Sc, Sc-j | Detail |
| CX3g031222 | 3:6,907,395-6,907,787 | + | C1H3g27748 | C2H3g16307 | - | - | - | Detail |
| CX3g029027 | 3:6,908,371-6,908,710 | + | C1H3g27748 | C2H3g16307 | LOC_Os03g14334 | Os03g0247600 | - | Detail |
| CX3g027944 | 3:6,909,869-6,910,132 | + | C1H3g31201 | C2H3g17890 | - | Os03g0247750 | - | Detail |
| CX3g030912 | 3:6,915,919-6,918,046 | + | C1H3g19658 | C2H3g21682 | LOC_Os03g14370 | Os03g0247900 | OsACR9 | Detail |
| CX3g029315 | 3:6,921,036-6,927,289 | - | C1H3g14669 | C2H3g29476 | LOC_Os03g14380 | Os03g0248000 | - | Detail |
| CX3g029955 | 3:6,930,087-6,930,477 | - | C1H3g19279 | C2H3g06941 | - | Os03g0694500 | - | Detail |
| CX3g025347 | 3:6,938,812-6,940,525 | - | C1H3g02498 | C2H3g25743 | LOC_Os03g14400 | Os03g0248200 | - | Detail |
| CX3g027180 | 3:6,942,940-6,945,447 | - | C1H3g30991 | C2H3g25743 | LOC_Os03g14420 | Os03g0248300 | - | Detail |
| CX3g030378 | 3:6,946,834-6,947,307 | - | C1H3g05151 | C2H3g17020 | LOC_Os03g14440 | Os03g0248500 | - | Detail |
| CX3g028551 | 3:6,950,369-6,954,654 | - | C1H3g19724 | C2H3g16902 | LOC_Os03g14450 | Os03g0248600 | - | Detail |