| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H6g09670 | 6:25,880,842-25,883,508 | - | C2H6g03801 | CX6g043434 | LOC_Os06g48980 | Os06g0703000 | - | Detail |
| C1H6g18502 | 6:25,887,723-25,892,407 | - | C2H6g17371 | CX6g045780 | LOC_Os06g49010 | Os06g0703500 | - | Detail |
| C1H6g16279 | 6:25,896,374-25,897,321 | - | - | - | LOC_Os06g49020 | Os06g0703600 | - | Detail |
| C1H6g29648 | 6:25,898,415-25,901,197 | + | C2H6g15424 | CX6g045783 | LOC_Os06g49030 | Os06g0703800 | - | Detail |
| C1H6g07308 | 6:25,910,174-25,919,099 | + | C2H6g26654 | CX6g045465 | LOC_Os06g49040 | Os06g0703900 | - | Detail |
| C1H6g31643 | 6:25,920,872-25,924,324 | + | C2H6g01098 | CX6g043942 | LOC_Os06g49060 | Os06g0704100 | - | Detail |
| C1H6g21776 | 6:25,925,126-25,925,469 | - | C2H6g14094 | CX6g043513 | LOC_Os06g49070 | Os06g0704200 | - | Detail |
| C1H6g04818 | 6:25,926,051-25,929,679 | + | C2H6g09929 | CX6g042446 | LOC_Os06g49080 | Os06g0704300 | C3H46, OsC3H46, LIC, OsLIC | Detail |
| C1H6g07512 | 6:25,931,685-25,936,836 | + | C2H6g08437 | CX6g045885 | LOC_Os06g49090 | Os06g0704400 | - | Detail |
| C1H6g27120 | 6:25,942,129-25,943,754 | + | C2H6g13363 | CX6g044421 | LOC_Os06g49100 | Os06g0704500 | - | Detail |
| C1H6g00037 | 6:25,945,314-25,949,616 | - | C2H6g08289 | CX6g045141 | LOC_Os06g49110 | Os06g0704600 | - | Detail |
| C1H6g20822 | 6:25,950,325-25,954,757 | - | C2H6g04274 | CX6g043594 | LOC_Os06g49120 | Os06g0704700 | - | Detail |
| C1H6g30381 | 6:25,956,036-25,970,978 | - | C2H6g29592 | CX6g043593 | LOC_Os06g49130 | Os06g0704800 | OsHAC704, OsHAC12 | Detail |
| C1H6g14385 | 6:25,971,877-25,974,591 | + | C2H6g27374 | CX6g041788 | LOC_Os06g49140 | Os06g0704900 | - | Detail |
| C1H6g27051 | 6:25,976,378-25,978,262 | + | C2H6g16318 | CX6g041568 | LOC_Os06g49150 | Os06g0705000 | OsGMT1 | Detail |
| C1H6g17550 | 6:25,979,273-25,980,346 | + | C2H6g07212 | CX6g041902 | LOC_Os06g49160 | Os06g0705100 | - | Detail |
| C1H6g05795 | 6:25,981,184-25,984,997 | - | C2H6g22144 | CX6g044278 | LOC_Os06g49170 | Os06g0705200 | - | Detail |
| C1H6g31669 | 6:25,987,417-25,993,127 | - | C2H6g27734 | CX6g041917 | LOC_Os06g49185 | Os06g0705300 | - | Detail |
| C1H6g13928 | 6:25,993,988-25,996,225 | - | C2H6g16745 | CX6g041917 | LOC_Os06g46840 | Os06g0705350 | - | Detail |
| C1H6g11993 | 6:25,997,556-25,997,852 | + | - | CX6g044181 | LOC_Os06g49190 | Os06g0705400 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g000151 | 1:13,917,344-13,919,282 | - | C1H1g06071 | C2H1g30124 | LOC_Os01g27230 | Os01g0370000 | - | Detail |
| CX1g005680 | 1:13,925,995-13,927,418 | - | C1H1g03681 | C2H1g01507 | LOC_Os01g27240 | Os01g0370000 | - | Detail |
| CX1g004898 | 1:13,937,025-13,937,285 | - | - | - | LOC_Os01g29780 | - | - | Detail |
| CX1g001786 | 1:13,947,080-13,947,973 | - | C1H1g30782 | C2H1g22665 | LOC_Os01g27260 | Os01g0370200 | - | Detail |
| CX1g001926 | 1:13,952,278-13,952,484 | + | - | - | - | - | - | Detail |
| CX1g004528 | 1:13,952,564-13,954,871 | + | C1H1g22563 | C2H1g23519 | LOC_Os01g27300 | Os01g0370600 | - | Detail |
| CX1g000150 | 1:13,970,510-13,970,755 | - | - | - | - | - | - | Detail |
| CX1g000438 | 1:13,971,687-13,973,691 | - | C1H1g11191 | C2H1g23519 | LOC_Os01g27360 | Os01g0371200 | - | Detail |
| CX1g005217 | 1:13,998,327-13,999,415 | + | C1H1g01504 | C2H1g17472 | LOC_Os01g27470 | Os01g0918300 | - | Detail |
| CX1g007076 | 1:14,007,557-14,008,684 | - | C1H1g31694 | C2H1g11131 | LOC_Os01g27490 | Os01g0372500 | OsAns, OsANS1 | Detail |
| CX1g002992 | 1:14,014,126-14,017,584 | - | C1H1g03999 | C2H1g22981 | LOC_Os01g27520 | Os01g0372700 | - | Detail |
| CX1g001611 | 1:14,031,286-14,033,433 | + | C1H1g24753 | C2H1g24233 | LOC_Os01g27600 | Os01g0373500 | - | Detail |
| CX1g002734 | 1:14,041,022-14,043,866 | - | - | - | - | Os01g0373700 | - | Detail |
| CX1g000761 | 1:14,052,314-14,053,428 | + | C1H1g26843 | C2H1g20925 | LOC_Os01g27630 | Os01g0374000 | - | Detail |
| CX1g006362 | 1:14,074,230-14,074,626 | - | C1H1g29878 | C2H1g15347 | - | - | - | Detail |
| CX1g005767 | 1:14,076,955-14,079,126 | - | C1H1g17990 | C2H1g07688 | LOC_Os01g27650 | Os01g0374200 | - | Detail |
| CX1g004535 | 1:14,082,523-14,082,828 | - | - | - | - | - | - | Detail |
| CX1g004412 | 1:14,095,414-14,100,832 | + | C1H1g28149 | C2H1g20909 | LOC_Os01g27700 | Os01g0374600 | - | Detail |
| CX1g004732 | 1:14,114,348-14,117,954 | + | C1H1g20959 | C2H1g09188 | LOC_Os01g27720 | Os01g0374900 | - | Detail |
| CX1g004114 | 1:14,119,673-14,120,917 | + | C1H1g13768 | C2H1g29780 | LOC_Os01g27590 | Os01g0527900 | - | Detail |