| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H11g20674 | 11:25,303,260-25,305,010 | - | C1H11g24803 | - | LOC_Os11g48030 | Os11g0707700 | - | Detail |
| C2H11g23789 | 11:25,308,395-25,309,441 | - | C1H11g24803 | CX11g012815 | LOC_Os11g48030 | Os11g0707700 | - | Detail |
| C2H11g18637 | 11:25,310,145-25,313,646 | + | C1H11g00342 | CX11g011522 | LOC_Os11g48040 | Os11g0707800 | OsUCP2 | Detail |
| C2H11g16826 | 11:25,322,422-25,325,285 | + | C1H11g07178 | CX11g014798 | LOC_Os11g48060 | Os11g0708100 | - | Detail |
| C2H11g30672 | 11:25,331,182-25,333,640 | + | C1H11g08651 | CX11g013159 | LOC_Os11g48070 | Os11g0708400 | - | Detail |
| C2H11g26751 | 11:25,335,956-25,336,894 | + | C1H10g01786 | CX11g012727 | LOC_Os11g48080 | Os11g0708500 | OsPDX1.3 | Detail |
| C2H11g05320 | 11:25,339,795-25,351,052 | - | C1H11g11341 | CX11g012342 | LOC_Os11g48090 | Os11g0708600 | - | Detail |
| C2H12g20675 | 12:22,652-23,719 | - | C1H12g21021 | CX12g015411 | - | - | - | Detail |
| C2H12g23164 | 12:27,770-28,455 | + | C1H12g08161 | CX12g017379 | - | - | - | Detail |
| C2H12g12006 | 12:28,960-31,581 | + | C1H12g08161 | CX12g015402 | - | - | - | Detail |
| C2H12g19296 | 12:36,886-47,626 | - | C1H12g25598 | CX12g017565 | - | - | - | Detail |
| C2H12g28928 | 12:48,907-50,400 | - | C1H11g11120 | CX12g016457 | LOC_Os11g01010 | Os11g0100100 | - | Detail |
| C2H12g27338 | 12:50,625-53,055 | + | C1H12g25928 | CX12g015584 | LOC_Os12g01010 | Os12g0100100 | - | Detail |
| C2H12g08992 | 12:53,444-56,416 | - | C1H12g18793 | CX12g015048 | LOC_Os12g01020 | Os12g0100200 | - | Detail |
| C2H12g02041 | 12:60,805-62,102 | - | C1H11g01849 | CX12g016135 | LOC_Os12g01030 | Os12g0100500 | - | Detail |
| C2H12g24638 | 12:63,827-65,591 | - | C1H11g20414 | CX11g013460 | - | - | - | Detail |
| C2H12g25359 | 12:80,010-86,692 | + | C1H12g18361 | CX12g016373 | LOC_Os12g01080 | Os11g0101200 | OsRpp30 | Detail |
| C2H12g22259 | 12:87,602-87,884 | + | C1H12g27411 | - | LOC_Os12g01090 | - | - | Detail |
| C2H12g02893 | 12:89,326-90,640 | + | C1H12g07544 | CX12g017682 | LOC_Os12g01100 | Os11g0101200 | OsRpp30 | Detail |
| C2H12g09125 | 12:114,841-115,452 | + | C1H11g18239 | CX12g018648 | LOC_Os12g01120 | Os12g0101600 | WOX3, OsWOX3, OsNS, OsPRS | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g027562 | 3:6,680,482-6,682,750 | - | C1H3g19058 | C2H3g16149 | LOC_Os03g13950 | Os03g0243100 | - | Detail |
| CX3g026057 | 3:6,687,518-6,691,594 | - | C1H3g13143 | C2H3g16858 | LOC_Os03g13960 | Os03g0243200 | - | Detail |
| CX3g027554 | 3:6,692,856-6,693,038 | + | - | - | - | - | - | Detail |
| CX3g026485 | 3:6,694,963-6,698,711 | - | C1H3g26726 | C2H3g16858 | LOC_Os03g13970 | Os03g0243300 | OsRpn10, OsvWA9 | Detail |
| CX3g026209 | 3:6,708,498-6,713,546 | + | C1H3g06194 | C2H3g01768 | LOC_Os03g14000 | Os03g0243600 | OsACBP5 | Detail |
| CX3g028457 | 3:6,716,226-6,719,340 | + | C1H3g04646 | C2H3g11388 | LOC_Os03g14010 | Os03g0243700 | - | Detail |
| CX3g024990 | 3:6,728,330-6,730,576 | - | C1H3g17833 | C2H3g18377 | LOC_Os03g14030 | Os03g0243900 | - | Detail |
| CX3g029567 | 3:6,732,971-6,735,038 | + | C1H3g18451 | C2H3g07558 | LOC_Os03g14040 | Os03g0244000 | - | Detail |
| CX3g030186 | 3:6,742,956-6,746,442 | + | C1H3g18445 | C2H3g02531 | LOC_Os03g14050 | Os03g0244200 | - | Detail |
| CX3g029577 | 3:6,757,798-6,761,309 | + | C1H3g01802 | C2H3g30391 | LOC_Os03g14080 | Os03g0244600 | - | Detail |
| CX3g025151 | 3:6,767,411-6,769,354 | - | C1H3g17574 | C2H3g04380 | LOC_Os03g14090 | Os03g0244700 | - | Detail |
| CX3g030165 | 3:6,777,576-6,778,067 | - | C1H3g19459 | C2H3g24294 | LOC_Os03g20730 | Os03g0244950 | - | Detail |
| CX3g027701 | 3:6,779,570-6,782,597 | + | C1H3g03763 | C2H3g18030 | LOC_Os03g14120 | Os03g0245100 | - | Detail |
| CX3g026036 | 3:6,783,602-6,784,676 | - | C1H3g06553 | C2H3g03452 | LOC_Os03g14130 | Os03g0245200 | - | Detail |
| CX3g027348 | 3:6,787,373-6,788,544 | - | C1H3g27152 | C2H3g01214 | LOC_Os03g14140 | Os03g0245300 | - | Detail |
| CX3g029867 | 3:6,790,199-6,791,143 | - | C1H3g23422 | C2H3g21217 | LOC_Os03g14150 | Os03g0245500 | GAPLESS2 | Detail |
| CX3g028205 | 3:6,795,609-6,797,207 | - | C1H3g12594 | C2H3g18121 | LOC_Os03g14170 | Os03g0245700 | - | Detail |
| CX3g030827 | 3:6,805,781-6,805,993 | - | - | - | - | - | - | Detail |
| CX3g031193 | 3:6,809,892-6,810,614 | + | C1H3g26151 | C2H3g01805 | LOC_Os03g14180 | Os03g0245800 | OsHSP26, OsHSP26.7 | Detail |
| CX3g028262 | 3:6,811,856-6,812,258 | - | C1H3g11403 | C2H3g04163 | LOC_Os03g14190 | Os03g0286500 | - | Detail |