| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H9g29726 | 9:17,780,620-17,783,032 | - | C1H9g18045 | CX9g058091 | LOC_Os09g36360 | Os09g0534000 | - | Detail |
| C2H9g06995 | 9:17,786,587-17,790,379 | + | C1H9g14355 | CX9g055858 | LOC_Os09g36370 | Os09g0534200 | - | Detail |
| C2H9g24532 | 9:17,795,110-17,797,840 | + | C1H9g04179 | CX9g058141 | LOC_Os09g36440 | Os09g0534800 | - | Detail |
| C2H9g26686 | 9:17,799,433-17,802,786 | - | C1H9g22452 | CX9g055137 | LOC_Os09g36450 | Os09g0535000 | - | Detail |
| C2H9g12415 | 9:17,803,763-17,806,894 | + | C1H9g27668 | CX9g057768 | LOC_Os09g36460 | Os09g0535100 | - | Detail |
| C2H9g19017 | 9:17,811,989-17,814,876 | + | C1H9g23309 | CX9g056220 | LOC_Os09g36470 | Os09g0535200 | - | Detail |
| C2H9g02266 | 9:17,815,861-17,818,770 | + | C1H9g30113 | CX9g056638 | LOC_Os09g36480 | Os09g0535300 | - | Detail |
| C2H9g18632 | 9:17,826,392-17,827,405 | - | C1H9g02156 | CX9g055022 | LOC_Os09g36520 | Os09g0535900 | - | Detail |
| C2H9g08077 | 9:17,833,313-17,837,352 | - | C1H9g18132 | CX9g057534 | LOC_Os09g36530 | Os09g0536000 | - | Detail |
| C2H9g01597 | 9:17,848,085-17,849,838 | + | C1H9g23828 | CX9g055542 | LOC_Os09g36560 | Os09g0536300 | - | Detail |
| C2H9g27916 | 9:17,861,065-17,863,339 | + | C1H9g17095 | CX9g056300 | LOC_Os09g36580 | Os09g0536400 | - | Detail |
| C2H9g02676 | 9:17,869,987-17,873,375 | - | C1H9g11028 | CX9g057416 | LOC_Os09g36600 | Os09g0536700 | - | Detail |
| C2H9g02330 | 9:17,884,473-17,887,022 | + | C1H9g06888 | CX9g057733 | LOC_Os09g36670 | Os09g0537600 | - | Detail |
| C2H9g11788 | 9:17,888,726-17,891,134 | - | C1H9g14336 | CX9g057345 | LOC_Os09g36680 | Os09g0537700 | RNS4, OsRNS4, OsRRP, RNaseDIS | Detail |
| C2H9g24881 | 9:17,896,514-17,898,965 | - | C1H9g12593 | CX9g055095 | LOC_Os09g36700 | Os09g0538000 | - | Detail |
| C2H9g25356 | 9:17,901,374-17,903,543 | + | C1H9g12194 | CX9g057133 | LOC_Os09g36710 | Os09g0538200 | - | Detail |
| C2H9g08114 | 9:17,918,713-17,919,889 | - | C1H9g31173 | CX9g055420 | LOC_Os09g36730 | Os09g0538400 | OsMYB108 | Detail |
| C2H9g01669 | 9:17,926,216-17,926,659 | - | C1H9g22212 | CX9g056101 | LOC_Os09g36735 | Os09g0538450 | - | Detail |
| C2H9g03742 | 9:17,927,008-17,928,875 | + | C1H9g15664 | CX9g057786 | LOC_Os09g36740 | Os09g0538500 | MS5 | Detail |
| C2H9g08362 | 9:17,929,360-17,933,409 | - | C1H9g23441 | CX9g056628 | LOC_Os09g36750 | Os09g0538600 | APX9 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g027562 | 3:6,680,482-6,682,750 | - | C1H3g19058 | C2H3g16149 | LOC_Os03g13950 | Os03g0243100 | - | Detail |
| CX3g026057 | 3:6,687,518-6,691,594 | - | C1H3g13143 | C2H3g16858 | LOC_Os03g13960 | Os03g0243200 | - | Detail |
| CX3g027554 | 3:6,692,856-6,693,038 | + | - | - | - | - | - | Detail |
| CX3g026485 | 3:6,694,963-6,698,711 | - | C1H3g26726 | C2H3g16858 | LOC_Os03g13970 | Os03g0243300 | OsRpn10, OsvWA9 | Detail |
| CX3g026209 | 3:6,708,498-6,713,546 | + | C1H3g06194 | C2H3g01768 | LOC_Os03g14000 | Os03g0243600 | OsACBP5 | Detail |
| CX3g028457 | 3:6,716,226-6,719,340 | + | C1H3g04646 | C2H3g11388 | LOC_Os03g14010 | Os03g0243700 | - | Detail |
| CX3g024990 | 3:6,728,330-6,730,576 | - | C1H3g17833 | C2H3g18377 | LOC_Os03g14030 | Os03g0243900 | - | Detail |
| CX3g029567 | 3:6,732,971-6,735,038 | + | C1H3g18451 | C2H3g07558 | LOC_Os03g14040 | Os03g0244000 | - | Detail |
| CX3g030186 | 3:6,742,956-6,746,442 | + | C1H3g18445 | C2H3g02531 | LOC_Os03g14050 | Os03g0244200 | - | Detail |
| CX3g029577 | 3:6,757,798-6,761,309 | + | C1H3g01802 | C2H3g30391 | LOC_Os03g14080 | Os03g0244600 | - | Detail |
| CX3g025151 | 3:6,767,411-6,769,354 | - | C1H3g17574 | C2H3g04380 | LOC_Os03g14090 | Os03g0244700 | - | Detail |
| CX3g030165 | 3:6,777,576-6,778,067 | - | C1H3g19459 | C2H3g24294 | LOC_Os03g20730 | Os03g0244950 | - | Detail |
| CX3g027701 | 3:6,779,570-6,782,597 | + | C1H3g03763 | C2H3g18030 | LOC_Os03g14120 | Os03g0245100 | - | Detail |
| CX3g026036 | 3:6,783,602-6,784,676 | - | C1H3g06553 | C2H3g03452 | LOC_Os03g14130 | Os03g0245200 | - | Detail |
| CX3g027348 | 3:6,787,373-6,788,544 | - | C1H3g27152 | C2H3g01214 | LOC_Os03g14140 | Os03g0245300 | - | Detail |
| CX3g029867 | 3:6,790,199-6,791,143 | - | C1H3g23422 | C2H3g21217 | LOC_Os03g14150 | Os03g0245500 | GAPLESS2 | Detail |
| CX3g028205 | 3:6,795,609-6,797,207 | - | C1H3g12594 | C2H3g18121 | LOC_Os03g14170 | Os03g0245700 | - | Detail |
| CX3g030827 | 3:6,805,781-6,805,993 | - | - | - | - | - | - | Detail |
| CX3g031193 | 3:6,809,892-6,810,614 | + | C1H3g26151 | C2H3g01805 | LOC_Os03g14180 | Os03g0245800 | OsHSP26, OsHSP26.7 | Detail |
| CX3g028262 | 3:6,811,856-6,812,258 | - | C1H3g11403 | C2H3g04163 | LOC_Os03g14190 | Os03g0286500 | - | Detail |