| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g03282 | 4:7,839,230-7,844,356 | + | C2H4g15471 | CX4g033261 | LOC_Os04g17064 | Os04g0244500 | - | Detail |
| C1H4g00844 | 4:7,850,541-7,851,294 | - | C2H4g22629 | CX4g033837 | LOC_Os04g17100 | Os04g0244800 | - | Detail |
| C1H4g07475 | 4:8,045,740-8,052,543 | - | C2H4g17703 | CX4g033363 | LOC_Os04g24430 | Os04g0249500 | OsSUS7 | Detail |
| C1H4g12276 | 4:8,056,878-8,059,164 | - | C2H4g28644 | CX4g032666 | LOC_Os04g17660 | Os04g0249600 | STR6, OsHAC1;2, OsStr6, OsRhST, RLD | Detail |
| C1H4g24988 | 4:8,069,828-8,075,068 | + | C2H11g21202 | - | LOC_Os10g06810 | - | - | Detail |
| C1H4g21643 | 4:8,077,295-8,077,765 | + | C2H4g21737 | - | LOC_Os10g06860 | - | - | Detail |
| C1H4g04939 | 4:8,086,420-8,087,418 | + | C2H4g27695 | CX4g036046 | LOC_Os04g20680 | Os04g0275100 | - | Detail |
| C1H4g18102 | 4:8,090,690-8,091,787 | + | C2H4g27695 | CX4g036046 | LOC_Os04g20680 | Os04g0275100 | - | Detail |
| C1H4g19581 | 4:8,135,934-8,140,510 | + | C2H4g11645 | CX4g035547 | LOC_Os04g20590 | Os04g0274400 | - | Detail |
| C1H4g18833 | 4:8,143,250-8,146,268 | + | C2H4g05451 | CX4g035160 | - | Os04g0274250 | - | Detail |
| C1H4g08176 | 4:8,152,022-8,153,181 | - | C2H4g18722 | CX4g034211 | LOC_Os04g20474 | Os04g0274100 | - | Detail |
| C1H4g21420 | 4:8,161,654-8,166,539 | + | C2H4g17258 | CX4g033803 | LOC_Os04g20560 | Os04g0273900 | - | Detail |
| C1H4g08366 | 4:8,189,994-8,191,980 | - | C2H4g29996 | CX4g031564 | LOC_Os04g20510 | Os04g0273100 | - | Detail |
| C1H4g14718 | 4:8,201,309-8,202,775 | - | C2H4g18722 | CX4g035306 | LOC_Os04g20474 | Os04g0271700 | - | Detail |
| C1H4g12470 | 4:8,220,030-8,221,268 | + | C2H4g07238 | CX4g032938 | LOC_Os04g20420 | Os04g0272400 | - | Detail |
| C1H4g16428 | 4:8,235,986-8,236,796 | + | C2H4g15311 | CX4g033602 | - | Os08g0178900 | - | Detail |
| C1H4g20808 | 4:8,247,439-8,248,917 | + | C2H4g18722 | CX4g035242 | LOC_Os04g20330 | Os04g0271700 | - | Detail |
| C1H4g05138 | 4:8,294,259-8,297,875 | - | C2H4g11411 | CX4g035052 | LOC_Os04g20280 | Os04g0271200 | - | Detail |
| C1H4g20618 | 4:8,308,360-8,321,505 | + | C2H4g16551 | CX4g035775 | LOC_Os04g20270 | Os04g0271000 | - | Detail |
| C1H4g19215 | 4:8,343,277-8,344,833 | + | C2H4g18722 | CX4g035041 | LOC_Os04g20260 | Os04g0270900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g027562 | 3:6,680,482-6,682,750 | - | C1H3g19058 | C2H3g16149 | LOC_Os03g13950 | Os03g0243100 | - | Detail |
| CX3g026057 | 3:6,687,518-6,691,594 | - | C1H3g13143 | C2H3g16858 | LOC_Os03g13960 | Os03g0243200 | - | Detail |
| CX3g027554 | 3:6,692,856-6,693,038 | + | - | - | - | - | - | Detail |
| CX3g026485 | 3:6,694,963-6,698,711 | - | C1H3g26726 | C2H3g16858 | LOC_Os03g13970 | Os03g0243300 | OsRpn10, OsvWA9 | Detail |
| CX3g026209 | 3:6,708,498-6,713,546 | + | C1H3g06194 | C2H3g01768 | LOC_Os03g14000 | Os03g0243600 | OsACBP5 | Detail |
| CX3g028457 | 3:6,716,226-6,719,340 | + | C1H3g04646 | C2H3g11388 | LOC_Os03g14010 | Os03g0243700 | - | Detail |
| CX3g024990 | 3:6,728,330-6,730,576 | - | C1H3g17833 | C2H3g18377 | LOC_Os03g14030 | Os03g0243900 | - | Detail |
| CX3g029567 | 3:6,732,971-6,735,038 | + | C1H3g18451 | C2H3g07558 | LOC_Os03g14040 | Os03g0244000 | - | Detail |
| CX3g030186 | 3:6,742,956-6,746,442 | + | C1H3g18445 | C2H3g02531 | LOC_Os03g14050 | Os03g0244200 | - | Detail |
| CX3g029577 | 3:6,757,798-6,761,309 | + | C1H3g01802 | C2H3g30391 | LOC_Os03g14080 | Os03g0244600 | - | Detail |
| CX3g025151 | 3:6,767,411-6,769,354 | - | C1H3g17574 | C2H3g04380 | LOC_Os03g14090 | Os03g0244700 | - | Detail |
| CX3g030165 | 3:6,777,576-6,778,067 | - | C1H3g19459 | C2H3g24294 | LOC_Os03g20730 | Os03g0244950 | - | Detail |
| CX3g027701 | 3:6,779,570-6,782,597 | + | C1H3g03763 | C2H3g18030 | LOC_Os03g14120 | Os03g0245100 | - | Detail |
| CX3g026036 | 3:6,783,602-6,784,676 | - | C1H3g06553 | C2H3g03452 | LOC_Os03g14130 | Os03g0245200 | - | Detail |
| CX3g027348 | 3:6,787,373-6,788,544 | - | C1H3g27152 | C2H3g01214 | LOC_Os03g14140 | Os03g0245300 | - | Detail |
| CX3g029867 | 3:6,790,199-6,791,143 | - | C1H3g23422 | C2H3g21217 | LOC_Os03g14150 | Os03g0245500 | GAPLESS2 | Detail |
| CX3g028205 | 3:6,795,609-6,797,207 | - | C1H3g12594 | C2H3g18121 | LOC_Os03g14170 | Os03g0245700 | - | Detail |
| CX3g030827 | 3:6,805,781-6,805,993 | - | - | - | - | - | - | Detail |
| CX3g031193 | 3:6,809,892-6,810,614 | + | C1H3g26151 | C2H3g01805 | LOC_Os03g14180 | Os03g0245800 | OsHSP26, OsHSP26.7 | Detail |
| CX3g028262 | 3:6,811,856-6,812,258 | - | C1H3g11403 | C2H3g04163 | LOC_Os03g14190 | Os03g0286500 | - | Detail |