| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g08716 | 3:16,925,345-16,925,834 | + | C1H3g16844 | - | LOC_Os03g32330 | Os03g0438400 | - | Detail |
| C2H3g25901 | 3:16,975,364-16,976,902 | + | C1H3g27126 | CX3g028421 | LOC_Os03g32470 | Os03g0439500 | - | Detail |
| C2H3g00828 | 3:16,982,325-16,983,125 | - | C1H3g10649 | CX3g029614 | - | Os03g0114400 | - | Detail |
| C2H3g13437 | 3:17,025,684-17,027,541 | - | C1H3g06834 | CX3g025406 | LOC_Os03g32490 | Os03g0439700 | - | Detail |
| C2H3g15363 | 3:17,032,739-17,034,277 | + | C1H3g21761 | CX3g028175 | LOC_Os03g32499 | Os03g0439800 | - | Detail |
| C2H3g25565 | 3:17,052,831-17,055,209 | + | C1H3g11595 | CX3g026641 | LOC_Os03g32580 | Os03g0440900 | - | Detail |
| C2H3g20190 | 3:17,055,536-17,064,832 | - | C1H3g28711 | CX3g027696 | LOC_Os03g32590 | Os03g0441000 | - | Detail |
| C2H3g11825 | 3:17,074,561-17,077,071 | - | C1H3g12283 | CX3g025857 | LOC_Os03g32620 | Os03g0441400 | - | Detail |
| C2H3g07036 | 3:17,168,713-17,169,390 | + | C1H3g09033 | CX3g025420 | LOC_Os03g32790 | Os03g0442900 | - | Detail |
| C2H3g18530 | 3:17,316,196-17,316,901 | - | C1H3g08585 | CX3g029665 | LOC_Os03g33090 | Os03g0445700 | OsLBD37 | Detail |
| C2H3g30048 | 3:17,359,090-17,362,124 | + | C1H3g15486 | CX3g024950 | - | - | - | Detail |
| C2H3g30096 | 3:17,427,330-17,434,816 | - | C1H3g26264 | CX3g029845 | LOC_Os03g33580 | Os03g0448600 | - | Detail |
| C2H3g02896 | 3:17,446,012-17,452,485 | - | C1H3g27459 | CX3g025874 | LOC_Os03g33590 | Os03g0448700 | - | Detail |
| C2H3g09597 | 3:17,504,409-17,508,494 | + | C1H3g11876 | CX3g025469 | LOC_Os03g33650 | Os03g0449200 | SHL4, SHO2, SHO2/SHL4, OsAGO7 | Detail |
| C2H3g06387 | 3:17,573,773-17,577,321 | - | C1H3g10349 | CX3g028866 | LOC_Os03g33012 | Os03g0444900 | OsWRKY33, OsWRKY81 | Detail |
| C2H3g24450 | 3:17,583,817-17,584,173 | - | C1H3g26549 | - | - | Os03g0444900 | OsWRKY33, OsWRKY81 | Detail |
| C2H3g04259 | 3:17,695,517-17,699,643 | - | C1H3g16808 | CX3g031079 | LOC_Os03g34040 | Os03g0452300 | - | Detail |
| C2H3g26683 | 3:17,735,716-17,736,909 | + | - | CX3g027872 | - | Os03g0454300 | - | Detail |
| C2H3g20904 | 3:17,751,779-17,752,998 | + | C1H3g08800 | CX3g026859 | LOC_Os03g34280 | Os03g0453800 | - | Detail |
| C2H3g06895 | 3:17,755,871-17,758,744 | + | C1H3g13672 | CX3g026131 | - | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g030092 | 3:6,411,081-6,411,377 | - | C1H3g16339 | C2H3g08004 | LOC_Os03g15100 | - | - | Detail |
| CX3g025606 | 3:6,418,607-6,420,992 | + | C1H3g10596 | C2H3g28344 | LOC_Os03g13300 | Os03g0236200 | OsGAD3 | Detail |
| CX3g028412 | 3:6,421,692-6,422,420 | + | C1H3g16595 | C2H3g08962 | LOC_Os03g13310 | Os03g0236300 | Os2R_MYB34 | Detail |
| CX3g027075 | 3:6,425,432-6,426,373 | - | - | - | - | - | - | Detail |
| CX3g027825 | 3:6,427,085-6,428,224 | - | C1H3g09841 | C2H3g11740 | LOC_Os03g13340 | Os03g0236675 | - | Detail |
| CX3g027924 | 3:6,430,283-6,430,918 | + | C1H3g26140 | C2H3g20390 | LOC_Os03g13360 | Os03g0236800 | - | Detail |
| CX3g026764 | 3:6,432,429-6,433,079 | + | C1H3g26595 | C2H3g08095 | LOC_Os03g13370 | Os03g0236900 | - | Detail |
| CX3g030333 | 3:6,433,960-6,443,066 | + | C1H3g30353 | C2H3g11238 | LOC_Os03g13370 | Os03g0236966 | OsAPC6 | Detail |
| CX3g025761 | 3:6,446,421-6,450,032 | + | C1H3g16967 | C2H3g29074 | LOC_Os03g13380 | Os03g0237000 | - | Detail |
| CX3g026598 | 3:6,452,653-6,454,595 | + | C1H3g11077 | - | LOC_Os03g13390 | Os03g0237100 | - | Detail |
| CX3g027254 | 3:6,459,506-6,464,012 | - | C1H3g08429 | C2H3g28705 | LOC_Os03g13400 | Os03g0237250 | OsIDD14, LPA1 | Detail |
| CX3g028559 | 3:6,485,719-6,486,261 | + | C1H3g09361 | C2H3g29962 | LOC_Os03g13450 | Os03g0237500 | - | Detail |
| CX3g028914 | 3:6,489,862-6,495,001 | - | C1H3g17244 | C2H3g03025 | LOC_Os03g13460 | Os03g0237600 | - | Detail |
| CX3g030120 | 3:6,501,529-6,504,205 | - | C1H3g24201 | C2H3g23135 | LOC_Os03g13480 | Os03g0237900 | - | Detail |
| CX3g025055 | 3:6,504,868-6,505,335 | - | C1H3g24201 | C2H3g23135 | LOC_Os03g13490 | Os03g0237950 | - | Detail |
| CX3g025312 | 3:6,511,387-6,514,293 | - | C1H3g02595 | C2H3g22282 | LOC_Os03g13520 | Os03g0238300 | - | Detail |
| CX3g029412 | 3:6,531,052-6,533,502 | + | C1H3g23768 | C2H3g15172 | LOC_Os03g13540 | Os03g0238600 | - | Detail |
| CX3g024975 | 3:6,534,374-6,534,532 | + | - | - | - | - | - | Detail |
| CX3g030281 | 3:6,534,594-6,537,743 | - | C1H3g02167 | C2H3g18176 | LOC_Os03g13550 | Os03g0238700 | - | Detail |
| CX3g028158 | 3:6,538,662-6,543,773 | - | C1H3g21099 | C2H3g03887 | LOC_Os03g13560 | Os03g0238800 | - | Detail |