| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H6g03777 | 6:7,003,407-7,004,426 | - | - | CX6g041399 | LOC_Os06g14620 | Os06g0257450 | ST1, st1(ws1), ws1, st1, RNRS1, rnrs1, NSL2 | Detail |
| C2H6g04113 | 6:7,007,145-7,008,692 | + | C1H6g02316 | CX6g044724 | LOC_Os06g14630 | Os06g0257600 | - | Detail |
| C2H6g00648 | 6:7,026,926-7,027,972 | + | C1H6g09969 | CX6g043290 | LOC_Os06g14670 | Os06g0258000 | - | Detail |
| C2H6g03619 | 6:7,084,002-7,098,976 | + | C1H6g11559 | CX6g045764 | LOC_Os06g14740 | Os06g0258900 | - | Detail |
| C2H6g01049 | 6:7,100,001-7,107,702 | - | C1H6g18024 | CX6g044644 | LOC_Os06g14750 | Os06g0259000 | - | Detail |
| C2H6g13770 | 6:7,153,337-7,153,943 | - | C1H6g12074 | CX6g041615 | - | - | - | Detail |
| C2H6g10609 | 6:7,163,058-7,163,564 | + | C1H6g12074 | CX6g045748 | LOC_Os07g25060 | Os07g0432333 | - | Detail |
| C2H6g05565 | 6:7,164,963-7,165,619 | + | - | CX6g042529 | - | - | - | Detail |
| C2H6g15261 | 6:7,187,480-7,191,271 | - | C1H6g28805 | CX6g041283 | LOC_Os06g14780 | Os06g0260000 | - | Detail |
| C2H6g21532 | 6:7,218,192-7,219,673 | - | - | CX6g045707 | LOC_Os06g14810 | Os06g0260500 | OsCUT5 | Detail |
| C2H6g29156 | 6:7,257,704-7,259,179 | + | - | CX6g041231 | LOC_Os06g15020 | Os06g0262200 | OsCUT6 | Detail |
| C2H6g22045 | 6:7,300,310-7,301,791 | - | - | CX6g043029 | LOC_Os06g15170 | Os06g0262800 | OsCUT7 | Detail |
| C2H6g13890 | 6:7,319,272-7,320,855 | + | - | - | - | - | - | Detail |
| C2H6g18864 | 6:7,320,873-7,321,216 | + | - | - | - | - | - | Detail |
| C2H6g20291 | 6:7,321,312-7,323,501 | - | - | CX6g043029 | LOC_Os06g15250 | Os06g0263400 | OsCUT8 | Detail |
| C2H6g11848 | 6:7,340,325-7,342,073 | + | C1H6g14061 | CX6g043939 | LOC_Os06g15330 | Os06g0264200 | OsCOL16 | Detail |
| C2H6g27689 | 6:7,357,477-7,363,510 | + | C1H6g03979 | CX6g044650 | LOC_Os06g15360 | Os06g0264300 | - | Detail |
| C2H6g23695 | 6:7,373,848-7,378,740 | + | C1H6g06916 | CX6g042595 | LOC_Os06g15370 | Os06g0264500 | OsNPF3.1 | Detail |
| C2H6g28059 | 6:7,378,868-7,379,221 | - | - | CX6g043321 | LOC_Os06g15380 | Os06g0264700 | - | Detail |
| C2H6g15511 | 6:7,380,099-7,380,488 | - | - | CX6g042083 | LOC_Os06g15390 | Os06g0264700 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g030092 | 3:6,411,081-6,411,377 | - | C1H3g16339 | C2H3g08004 | LOC_Os03g15100 | - | - | Detail |
| CX3g025606 | 3:6,418,607-6,420,992 | + | C1H3g10596 | C2H3g28344 | LOC_Os03g13300 | Os03g0236200 | OsGAD3 | Detail |
| CX3g028412 | 3:6,421,692-6,422,420 | + | C1H3g16595 | C2H3g08962 | LOC_Os03g13310 | Os03g0236300 | Os2R_MYB34 | Detail |
| CX3g027075 | 3:6,425,432-6,426,373 | - | - | - | - | - | - | Detail |
| CX3g027825 | 3:6,427,085-6,428,224 | - | C1H3g09841 | C2H3g11740 | LOC_Os03g13340 | Os03g0236675 | - | Detail |
| CX3g027924 | 3:6,430,283-6,430,918 | + | C1H3g26140 | C2H3g20390 | LOC_Os03g13360 | Os03g0236800 | - | Detail |
| CX3g026764 | 3:6,432,429-6,433,079 | + | C1H3g26595 | C2H3g08095 | LOC_Os03g13370 | Os03g0236900 | - | Detail |
| CX3g030333 | 3:6,433,960-6,443,066 | + | C1H3g30353 | C2H3g11238 | LOC_Os03g13370 | Os03g0236966 | OsAPC6 | Detail |
| CX3g025761 | 3:6,446,421-6,450,032 | + | C1H3g16967 | C2H3g29074 | LOC_Os03g13380 | Os03g0237000 | - | Detail |
| CX3g026598 | 3:6,452,653-6,454,595 | + | C1H3g11077 | - | LOC_Os03g13390 | Os03g0237100 | - | Detail |
| CX3g027254 | 3:6,459,506-6,464,012 | - | C1H3g08429 | C2H3g28705 | LOC_Os03g13400 | Os03g0237250 | OsIDD14, LPA1 | Detail |
| CX3g028559 | 3:6,485,719-6,486,261 | + | C1H3g09361 | C2H3g29962 | LOC_Os03g13450 | Os03g0237500 | - | Detail |
| CX3g028914 | 3:6,489,862-6,495,001 | - | C1H3g17244 | C2H3g03025 | LOC_Os03g13460 | Os03g0237600 | - | Detail |
| CX3g030120 | 3:6,501,529-6,504,205 | - | C1H3g24201 | C2H3g23135 | LOC_Os03g13480 | Os03g0237900 | - | Detail |
| CX3g025055 | 3:6,504,868-6,505,335 | - | C1H3g24201 | C2H3g23135 | LOC_Os03g13490 | Os03g0237950 | - | Detail |
| CX3g025312 | 3:6,511,387-6,514,293 | - | C1H3g02595 | C2H3g22282 | LOC_Os03g13520 | Os03g0238300 | - | Detail |
| CX3g029412 | 3:6,531,052-6,533,502 | + | C1H3g23768 | C2H3g15172 | LOC_Os03g13540 | Os03g0238600 | - | Detail |
| CX3g024975 | 3:6,534,374-6,534,532 | + | - | - | - | - | - | Detail |
| CX3g030281 | 3:6,534,594-6,537,743 | - | C1H3g02167 | C2H3g18176 | LOC_Os03g13550 | Os03g0238700 | - | Detail |
| CX3g028158 | 3:6,538,662-6,543,773 | - | C1H3g21099 | C2H3g03887 | LOC_Os03g13560 | Os03g0238800 | - | Detail |