| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g10120 | 1:19,494,578-19,499,804 | + | C1H1g16555 | CX1g003697 | LOC_Os01g38970 | Os01g0570700 | - | Detail |
| C2H1g26639 | 1:19,501,945-19,505,003 | - | C1H1g05272 | CX1g004643 | LOC_Os01g38980 | Os01g0570800 | OsIQM1 | Detail |
| C2H1g11902 | 1:19,525,685-19,529,436 | + | C1H1g12320 | CX1g004950 | LOC_Os01g38990 | Os01g0571000 | - | Detail |
| C2H1g27305 | 1:19,530,034-19,534,761 | - | C1H1g21409 | CX1g002465 | LOC_Os01g39000 | Os01g0571100 | - | Detail |
| C2H1g14300 | 1:19,541,052-19,543,466 | + | C1H1g07390 | CX1g006736 | LOC_Os01g39010 | Os01g0571200 | - | Detail |
| C2H1g16893 | 1:19,546,513-19,549,136 | + | C1H1g19692 | CX1g004092 | LOC_Os01g39020 | Os01g0571300 | OsHsfA7 | Detail |
| C2H1g12280 | 1:19,550,000-19,558,188 | + | C1H1g17261 | CX1g005574 | LOC_Os01g39100 | Os01g0572100 | - | Detail |
| C2H1g12124 | 1:19,558,767-19,560,238 | + | C1H1g00355 | - | - | - | - | Detail |
| C2H1g16877 | 1:19,569,595-19,573,703 | + | C1H1g04588 | CX1g001024 | LOC_Os01g39110 | Os01g0572300 | - | Detail |
| C2H1g07054 | 1:19,606,668-19,611,933 | - | C1H1g13150 | CX1g004353 | LOC_Os01g39134 | Os01g0572700 | - | Detail |
| C2H1g05454 | 1:19,629,952-19,630,257 | - | C1H1g28155 | CX1g006911 | LOC_Os01g56450 | Os01g0572966 | - | Detail |
| C2H1g24859 | 1:19,641,998-19,646,780 | + | C1H1g07908 | CX1g004042 | LOC_Os01g39250 | Os01g0574400 | - | Detail |
| C2H1g10171 | 1:19,647,787-19,653,694 | + | C1H1g29752 | CX1g004042 | LOC_Os01g39260 | Os01g0574500 | - | Detail |
| C2H1g01556 | 1:19,653,847-19,656,426 | - | C1H1g31440 | CX1g006116 | LOC_Os01g39270 | Os01g0574600 | OsGR2, GLYR2 | Detail |
| C2H1g15345 | 1:19,663,668-19,664,552 | - | C1H1g24447 | - | LOC_Os01g39290 | Os01g0574800 | - | Detail |
| C2H1g03847 | 1:19,688,840-19,697,282 | + | C1H1g25426 | CX1g005853 | LOC_Os01g39310 | Os01g0575000 | - | Detail |
| C2H1g04055 | 1:19,708,974-19,709,945 | + | C1H1g10200 | CX1g007231 | LOC_Os01g39330 | Os01g0575200 | OsbHLH024 | Detail |
| C2H1g02368 | 1:19,712,060-19,712,658 | + | C1H1g10200 | CX1g007231 | LOC_Os01g39330 | Os01g0575200 | OsbHLH024 | Detail |
| C2H1g09392 | 1:19,730,378-19,747,791 | - | C1H1g31451 | CX1g002175 | LOC_Os01g39380 | Os01g0575500 | OsSCD1 | Detail |
| C2H1g15351 | 1:19,787,944-19,794,520 | + | C1H1g30977 | - | LOC_Os01g39560 | Os01g0576100 | Rb1 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g029569 | 3:6,303,237-6,304,958 | - | C1H3g01497 | C2H3g13166 | LOC_Os03g13030 | Os03g0232800 | - | Detail |
| CX3g027690 | 3:6,306,052-6,309,814 | - | C1H3g06697 | C2H3g05297 | LOC_Os03g13040 | Os03g0232900 | - | Detail |
| CX3g025209 | 3:6,308,144-6,308,644 | + | - | - | - | - | - | Detail |
| CX3g025391 | 3:6,322,656-6,323,810 | + | C1H3g26874 | C2H3g03038 | LOC_Os03g13050 | Os03g0233000 | - | Detail |
| CX3g030154 | 3:6,325,953-6,327,113 | - | C1H3g16800 | C2H3g18690 | LOC_Os03g13070 | Os03g0233200 | - | Detail |
| CX3g029185 | 3:6,328,301-6,330,181 | - | C1H3g06079 | C2H3g14812 | LOC_Os03g13080 | Os03g0233300 | OsLysM-RLK2, OsLYK5, OsNFR5/OsRLK2 | Detail |
| CX3g028548 | 3:6,335,026-6,338,543 | + | C1H3g06632 | C2H3g23005 | LOC_Os03g13100 | Os03g0233500 | - | Detail |
| CX3g029407 | 3:6,343,264-6,346,320 | + | C1H3g16553 | C2H3g09799 | LOC_Os03g13130 | Os03g0233800 | - | Detail |
| CX3g025432 | 3:6,347,254-6,348,096 | + | C1H3g27731 | C2H3g17247 | LOC_Os03g13140 | Os03g0233900 | Hb1, OsPgb1.1 | Detail |
| CX3g027207 | 3:6,350,996-6,351,870 | + | C1H3g19664 | C2H3g00667 | LOC_Os03g13150 | Os03g0234000 | - | Detail |
| CX3g030474 | 3:6,354,116-6,355,105 | + | C1H3g02151 | C2H3g02090 | LOC_Os03g13160 | Os03g0234100 | - | Detail |
| CX3g028385 | 3:6,360,911-6,362,107 | + | C1H3g22268 | C2H3g20297 | LOC_Os03g13180 | Os03g0234500 | - | Detail |
| CX3g027164 | 3:6,363,878-6,368,555 | - | C1H3g22029 | C2H3g00447 | LOC_Os03g13190 | Os03g0234600 | - | Detail |
| CX3g030874 | 3:6,374,735-6,376,766 | - | C1H3g04582 | C2H3g06567 | LOC_Os03g13200 | Os03g0234900 | - | Detail |
| CX3g029207 | 3:6,378,367-6,380,080 | - | C1H3g27078 | C2H3g02755 | LOC_Os03g13210 | Os03g0235000 | - | Detail |
| CX3g031242 | 3:6,383,705-6,387,584 | + | C1H3g26089 | C2H3g08839 | LOC_Os03g13220 | Os03g0235100 | - | Detail |
| CX3g025226 | 3:6,388,902-6,390,830 | + | C1H3g13556 | C2H3g17418 | LOC_Os03g13230 | Os03g0235200 | - | Detail |
| CX3g028197 | 3:6,391,496-6,395,482 | - | C1H3g13432 | C2H3g00836 | LOC_Os03g13240 | Os03g0235300 | - | Detail |
| CX3g027179 | 3:6,396,462-6,402,616 | - | C1H3g17503 | C2H3g23746 | LOC_Os03g13250 | Os03g0235700 | - | Detail |
| CX3g029098 | 3:6,410,614-6,410,946 | - | C1H3g11550 | C2H3g04912 | LOC_Os03g13530 | Os03g0743650 | - | Detail |