| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g17004 | 3:2,076,465-2,081,052 | - | C1H3g30626 | CX3g028566 | LOC_Os03g04940 | Os03g0143000 | - | Detail |
| C2H3g18870 | 3:2,082,975-2,085,326 | + | C1H3g27298 | CX3g025128 | LOC_Os03g04950 | Os03g0143100 | OsSDD1 | Detail |
| C2H3g00510 | 3:2,092,205-2,096,021 | - | C1H3g02218 | CX3g027250 | LOC_Os03g04960 | Os03g0143300 | - | Detail |
| C2H3g20943 | 3:2,096,727-2,101,875 | - | C1H3g27270 | CX3g029237 | LOC_Os03g04970 | Os03g0143400 | - | Detail |
| C2H3g27834 | 3:2,104,362-2,106,908 | + | C1H3g30154 | CX3g027862 | LOC_Os03g04980 | Os03g0143600 | - | Detail |
| C2H3g13054 | 3:2,109,272-2,113,550 | + | C1H3g31666 | CX3g030942 | LOC_Os03g04990 | Os03g0143700 | - | Detail |
| C2H3g11174 | 3:2,116,950-2,134,352 | + | C1H3g05683 | CX3g030855 | LOC_Os03g05020 | Os03g0143800 | LPL2 | Detail |
| C2H3g25262 | 3:2,134,601-2,135,425 | + | C1H3g03140 | CX3g030717 | LOC_Os03g05030 | Os03g0143900 | - | Detail |
| C2H3g25681 | 3:2,135,615-2,140,480 | - | C1H3g19361 | CX3g027941 | LOC_Os03g05040 | Os03g0144000 | MEICA1 | Detail |
| C2H3g07589 | 3:2,151,604-2,152,125 | + | - | CX3g027314 | - | - | - | Detail |
| C2H3g04857 | 3:2,153,866-2,155,380 | + | C1H3g21183 | CX3g030916 | LOC_Os03g05060 | Os03g0144300 | - | Detail |
| C2H3g23961 | 3:2,158,604-2,160,163 | + | C1H3g20447 | CX3g030916 | LOC_Os03g05070 | Os03g0144500 | - | Detail |
| C2H3g00158 | 3:2,166,034-2,167,851 | + | C1H3g06705 | CX3g030916 | LOC_Os03g05110 | Os03g0144800 | - | Detail |
| C2H3g20075 | 3:2,172,136-2,175,228 | - | C1H3g19955 | CX3g027788 | LOC_Os03g05140 | Os03g0145102 | - | Detail |
| C2H3g29665 | 3:2,181,942-2,182,694 | + | C1H3g20499 | CX3g025772 | LOC_Os03g05160 | Os03g0145200 | - | Detail |
| C2H3g24545 | 3:2,185,398-2,186,027 | + | C1H3g25509 | CX3g030193 | LOC_Os03g16890 | Os03g0692000 | - | Detail |
| C2H3g14474 | 3:2,188,922-2,191,093 | - | C1H3g14347 | CX3g027358 | - | Os03g0363100 | - | Detail |
| C2H3g21503 | 3:2,192,542-2,201,403 | - | C1H3g07337 | CX3g028191 | LOC_Os03g05200 | Os03g0145500 | - | Detail |
| C2H3g25507 | 3:2,204,579-2,205,847 | - | C1H3g27104 | CX3g025781 | LOC_Os03g05210 | Os03g0145600 | - | Detail |
| C2H3g25373 | 3:2,206,652-2,208,965 | - | C1H3g18616 | CX3g029694 | LOC_Os03g05260 | Os03g0145800 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g029569 | 3:6,303,237-6,304,958 | - | C1H3g01497 | C2H3g13166 | LOC_Os03g13030 | Os03g0232800 | - | Detail |
| CX3g027690 | 3:6,306,052-6,309,814 | - | C1H3g06697 | C2H3g05297 | LOC_Os03g13040 | Os03g0232900 | - | Detail |
| CX3g025209 | 3:6,308,144-6,308,644 | + | - | - | - | - | - | Detail |
| CX3g025391 | 3:6,322,656-6,323,810 | + | C1H3g26874 | C2H3g03038 | LOC_Os03g13050 | Os03g0233000 | - | Detail |
| CX3g030154 | 3:6,325,953-6,327,113 | - | C1H3g16800 | C2H3g18690 | LOC_Os03g13070 | Os03g0233200 | - | Detail |
| CX3g029185 | 3:6,328,301-6,330,181 | - | C1H3g06079 | C2H3g14812 | LOC_Os03g13080 | Os03g0233300 | OsLysM-RLK2, OsLYK5, OsNFR5/OsRLK2 | Detail |
| CX3g028548 | 3:6,335,026-6,338,543 | + | C1H3g06632 | C2H3g23005 | LOC_Os03g13100 | Os03g0233500 | - | Detail |
| CX3g029407 | 3:6,343,264-6,346,320 | + | C1H3g16553 | C2H3g09799 | LOC_Os03g13130 | Os03g0233800 | - | Detail |
| CX3g025432 | 3:6,347,254-6,348,096 | + | C1H3g27731 | C2H3g17247 | LOC_Os03g13140 | Os03g0233900 | Hb1, OsPgb1.1 | Detail |
| CX3g027207 | 3:6,350,996-6,351,870 | + | C1H3g19664 | C2H3g00667 | LOC_Os03g13150 | Os03g0234000 | - | Detail |
| CX3g030474 | 3:6,354,116-6,355,105 | + | C1H3g02151 | C2H3g02090 | LOC_Os03g13160 | Os03g0234100 | - | Detail |
| CX3g028385 | 3:6,360,911-6,362,107 | + | C1H3g22268 | C2H3g20297 | LOC_Os03g13180 | Os03g0234500 | - | Detail |
| CX3g027164 | 3:6,363,878-6,368,555 | - | C1H3g22029 | C2H3g00447 | LOC_Os03g13190 | Os03g0234600 | - | Detail |
| CX3g030874 | 3:6,374,735-6,376,766 | - | C1H3g04582 | C2H3g06567 | LOC_Os03g13200 | Os03g0234900 | - | Detail |
| CX3g029207 | 3:6,378,367-6,380,080 | - | C1H3g27078 | C2H3g02755 | LOC_Os03g13210 | Os03g0235000 | - | Detail |
| CX3g031242 | 3:6,383,705-6,387,584 | + | C1H3g26089 | C2H3g08839 | LOC_Os03g13220 | Os03g0235100 | - | Detail |
| CX3g025226 | 3:6,388,902-6,390,830 | + | C1H3g13556 | C2H3g17418 | LOC_Os03g13230 | Os03g0235200 | - | Detail |
| CX3g028197 | 3:6,391,496-6,395,482 | - | C1H3g13432 | C2H3g00836 | LOC_Os03g13240 | Os03g0235300 | - | Detail |
| CX3g027179 | 3:6,396,462-6,402,616 | - | C1H3g17503 | C2H3g23746 | LOC_Os03g13250 | Os03g0235700 | - | Detail |
| CX3g029098 | 3:6,410,614-6,410,946 | - | C1H3g11550 | C2H3g04912 | LOC_Os03g13530 | Os03g0743650 | - | Detail |