| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g20073 | 2:27,029,901-27,033,289 | - | C1H2g24357 | CX2g020361 | LOC_Os02g47940 | Os02g0709200 | - | Detail |
| C2H2g08196 | 2:27,035,550-27,036,098 | - | - | CX2g024483 | LOC_Os02g47950 | Os02g0709300 | - | Detail |
| C2H2g10826 | 2:27,037,800-27,038,204 | + | - | - | LOC_Os02g47960 | Os02g0709350 | - | Detail |
| C2H2g16866 | 2:27,042,401-27,042,826 | - | C1H2g24881 | CX2g023336 | - | - | - | Detail |
| C2H2g03574 | 2:27,043,012-27,058,921 | + | C1H2g07319 | CX2g019810 | LOC_Os02g47970 | Os02g0709400 | - | Detail |
| C2H2g06342 | 2:27,065,694-27,066,687 | + | C1H2g00359 | CX2g024794 | LOC_Os02g47980 | Os02g0709600 | OsMIZ1 | Detail |
| C2H2g04995 | 2:27,072,039-27,080,319 | - | C1H2g25876 | CX2g021355 | LOC_Os02g48000 | Os02g0709800 | OsGAP1 | Detail |
| C2H2g05556 | 2:27,081,732-27,087,871 | - | C1H2g10122 | CX2g021782 | LOC_Os02g48010 | Os02g0710102 | - | Detail |
| C2H2g10833 | 2:27,099,026-27,099,776 | - | C1H2g01956 | CX2g019618 | LOC_Os02g48030 | - | - | Detail |
| C2H2g30439 | 2:27,120,289-27,121,374 | + | C1H2g13754 | CX2g023675 | LOC_Os02g48060 | Os02g0710300 | OsbHLH126, OsRSL2 | Detail |
| C2H2g01416 | 2:27,126,620-27,129,064 | + | C1H2g13956 | CX2g022189 | LOC_Os02g48080 | Os02g0710500 | ECK1 | Detail |
| C2H2g08370 | 2:27,134,739-27,137,227 | + | C1H2g03210 | CX2g022026 | LOC_Os02g48094 | Os02g0710700 | - | Detail |
| C2H2g13118 | 2:27,139,540-27,149,380 | + | C1H2g05301 | CX2g023149 | LOC_Os02g48100 | Os02g0710800 | - | Detail |
| C2H2g08570 | 2:27,149,895-27,155,707 | + | C1H2g09617 | CX2g024784 | LOC_Os02g48110 | Os02g0710900 | - | Detail |
| C2H2g28485 | 2:27,156,222-27,159,231 | - | C1H2g14761 | CX2g022460 | LOC_Os02g48116 | Os02g0711000 | - | Detail |
| C2H2g24997 | 2:27,162,356-27,163,825 | - | C1H2g31815 | CX2g022460 | LOC_Os02g48122 | Os02g0711100 | - | Detail |
| C2H2g00846 | 2:27,163,951-27,166,306 | + | C1H2g26775 | CX2g024643 | LOC_Os02g48130 | Os02g0711200 | - | Detail |
| C2H2g03294 | 2:27,166,687-27,167,172 | + | C1H2g25781 | CX2g023318 | LOC_Os02g48140 | Os02g0711300 | - | Detail |
| C2H2g02098 | 2:27,170,467-27,170,883 | - | - | CX1g005354 | LOC_Os02g48150 | Os02g0711400 | - | Detail |
| C2H2g08145 | 2:27,177,933-27,179,051 | - | C1H2g13442 | CX2g021444 | LOC_Os02g48170 | Os02g0711900 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g029569 | 3:6,303,237-6,304,958 | - | C1H3g01497 | C2H3g13166 | LOC_Os03g13030 | Os03g0232800 | - | Detail |
| CX3g027690 | 3:6,306,052-6,309,814 | - | C1H3g06697 | C2H3g05297 | LOC_Os03g13040 | Os03g0232900 | - | Detail |
| CX3g025209 | 3:6,308,144-6,308,644 | + | - | - | - | - | - | Detail |
| CX3g025391 | 3:6,322,656-6,323,810 | + | C1H3g26874 | C2H3g03038 | LOC_Os03g13050 | Os03g0233000 | - | Detail |
| CX3g030154 | 3:6,325,953-6,327,113 | - | C1H3g16800 | C2H3g18690 | LOC_Os03g13070 | Os03g0233200 | - | Detail |
| CX3g029185 | 3:6,328,301-6,330,181 | - | C1H3g06079 | C2H3g14812 | LOC_Os03g13080 | Os03g0233300 | OsLysM-RLK2, OsLYK5, OsNFR5/OsRLK2 | Detail |
| CX3g028548 | 3:6,335,026-6,338,543 | + | C1H3g06632 | C2H3g23005 | LOC_Os03g13100 | Os03g0233500 | - | Detail |
| CX3g029407 | 3:6,343,264-6,346,320 | + | C1H3g16553 | C2H3g09799 | LOC_Os03g13130 | Os03g0233800 | - | Detail |
| CX3g025432 | 3:6,347,254-6,348,096 | + | C1H3g27731 | C2H3g17247 | LOC_Os03g13140 | Os03g0233900 | Hb1, OsPgb1.1 | Detail |
| CX3g027207 | 3:6,350,996-6,351,870 | + | C1H3g19664 | C2H3g00667 | LOC_Os03g13150 | Os03g0234000 | - | Detail |
| CX3g030474 | 3:6,354,116-6,355,105 | + | C1H3g02151 | C2H3g02090 | LOC_Os03g13160 | Os03g0234100 | - | Detail |
| CX3g028385 | 3:6,360,911-6,362,107 | + | C1H3g22268 | C2H3g20297 | LOC_Os03g13180 | Os03g0234500 | - | Detail |
| CX3g027164 | 3:6,363,878-6,368,555 | - | C1H3g22029 | C2H3g00447 | LOC_Os03g13190 | Os03g0234600 | - | Detail |
| CX3g030874 | 3:6,374,735-6,376,766 | - | C1H3g04582 | C2H3g06567 | LOC_Os03g13200 | Os03g0234900 | - | Detail |
| CX3g029207 | 3:6,378,367-6,380,080 | - | C1H3g27078 | C2H3g02755 | LOC_Os03g13210 | Os03g0235000 | - | Detail |
| CX3g031242 | 3:6,383,705-6,387,584 | + | C1H3g26089 | C2H3g08839 | LOC_Os03g13220 | Os03g0235100 | - | Detail |
| CX3g025226 | 3:6,388,902-6,390,830 | + | C1H3g13556 | C2H3g17418 | LOC_Os03g13230 | Os03g0235200 | - | Detail |
| CX3g028197 | 3:6,391,496-6,395,482 | - | C1H3g13432 | C2H3g00836 | LOC_Os03g13240 | Os03g0235300 | - | Detail |
| CX3g027179 | 3:6,396,462-6,402,616 | - | C1H3g17503 | C2H3g23746 | LOC_Os03g13250 | Os03g0235700 | - | Detail |
| CX3g029098 | 3:6,410,614-6,410,946 | - | C1H3g11550 | C2H3g04912 | LOC_Os03g13530 | Os03g0743650 | - | Detail |