| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g26201 | 2:26,028,509-26,029,054 | - | C1H2g13888 | CX2g019053 | LOC_Os02g46180 | Os02g0686800 | OsFLZ6 | Detail |
| C2H2g16274 | 2:26,034,280-26,034,860 | - | C1H2g12372 | CX2g019053 | LOC_Os02g46190 | Os02g0686700 | - | Detail |
| C2H2g14907 | 2:26,041,294-26,041,764 | - | C1H2g24380 | CX2g019053 | LOC_Os02g46210 | Os02g0687200 | - | Detail |
| C2H2g20705 | 2:26,045,961-26,047,655 | - | C1H2g04645 | CX2g021886 | LOC_Os02g46220 | Os02g0687500 | - | Detail |
| C2H2g00232 | 2:26,077,015-26,081,748 | + | C1H2g29911 | - | - | - | - | Detail |
| C2H2g13045 | 2:26,082,144-26,086,642 | + | C1H2g04440 | CX2g023420 | LOC_Os02g46260 | Os02g0687900 | - | Detail |
| C2H2g01015 | 2:26,094,387-26,095,660 | + | C1H2g30839 | CX2g022794 | LOC_Os02g46290 | Os02g0688200 | OsPMEI10 | Detail |
| C2H2g06836 | 2:26,099,955-26,103,951 | + | C1H2g22768 | CX2g020423 | LOC_Os02g46320 | Os02g0688500 | - | Detail |
| C2H2g30648 | 2:26,114,025-26,115,146 | + | C1H2g26668 | CX2g022922 | LOC_Os02g46340 | Os02g0178600 | - | Detail |
| C2H2g27543 | 2:26,118,987-26,123,313 | - | C1H2g06477 | CX2g024866 | LOC_Os02g46350 | Os02g0688900 | - | Detail |
| C2H2g00766 | 2:26,135,147-26,135,710 | + | C1H2g08174 | CX2g019959 | LOC_Os02g46360 | Os02g0689000 | OsPMEI11 | Detail |
| C2H2g23851 | 2:26,144,600-26,145,075 | - | - | - | - | Os02g0689066 | - | Detail |
| C2H2g20781 | 2:26,151,534-26,153,769 | + | C1H2g12636 | CX2g022764 | LOC_Os02g46380 | Os02g0689200 | PUP11, PUP11-1 | Detail |
| C2H2g03281 | 2:26,163,050-26,163,913 | - | - | CX2g022882 | LOC_Os02g46420 | Os02g0689500 | - | Detail |
| C2H2g05419 | 2:26,173,037-26,174,023 | + | C1H2g20810 | - | LOC_Os02g44040 | Os02g0689600 | - | Detail |
| C2H2g08672 | 2:26,174,833-26,175,378 | - | - | CX2g020237 | LOC_Os02g46440 | Os02g0689700 | - | Detail |
| C2H2g07696 | 2:26,178,818-26,192,602 | - | C1H2g28370 | CX2g022494 | LOC_Os02g46450 | Os02g0689800 | OsCHR709, CHR709 | Detail |
| C2H2g09965 | 2:26,197,539-26,199,839 | - | C1H2g09545 | CX2g023508 | LOC_Os02g46460 | Os02g0689900 | OsNPF7.9 | Detail |
| C2H2g07155 | 2:26,200,125-26,200,415 | - | C1H2g11268 | CX2g023508 | LOC_Os02g46460 | Os02g0689900 | OsNPF7.9 | Detail |
| C2H2g30109 | 2:26,203,160-26,206,799 | - | - | CX2g022322 | - | Os02g0690000 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g029569 | 3:6,303,237-6,304,958 | - | C1H3g01497 | C2H3g13166 | LOC_Os03g13030 | Os03g0232800 | - | Detail |
| CX3g027690 | 3:6,306,052-6,309,814 | - | C1H3g06697 | C2H3g05297 | LOC_Os03g13040 | Os03g0232900 | - | Detail |
| CX3g025209 | 3:6,308,144-6,308,644 | + | - | - | - | - | - | Detail |
| CX3g025391 | 3:6,322,656-6,323,810 | + | C1H3g26874 | C2H3g03038 | LOC_Os03g13050 | Os03g0233000 | - | Detail |
| CX3g030154 | 3:6,325,953-6,327,113 | - | C1H3g16800 | C2H3g18690 | LOC_Os03g13070 | Os03g0233200 | - | Detail |
| CX3g029185 | 3:6,328,301-6,330,181 | - | C1H3g06079 | C2H3g14812 | LOC_Os03g13080 | Os03g0233300 | OsLysM-RLK2, OsLYK5, OsNFR5/OsRLK2 | Detail |
| CX3g028548 | 3:6,335,026-6,338,543 | + | C1H3g06632 | C2H3g23005 | LOC_Os03g13100 | Os03g0233500 | - | Detail |
| CX3g029407 | 3:6,343,264-6,346,320 | + | C1H3g16553 | C2H3g09799 | LOC_Os03g13130 | Os03g0233800 | - | Detail |
| CX3g025432 | 3:6,347,254-6,348,096 | + | C1H3g27731 | C2H3g17247 | LOC_Os03g13140 | Os03g0233900 | Hb1, OsPgb1.1 | Detail |
| CX3g027207 | 3:6,350,996-6,351,870 | + | C1H3g19664 | C2H3g00667 | LOC_Os03g13150 | Os03g0234000 | - | Detail |
| CX3g030474 | 3:6,354,116-6,355,105 | + | C1H3g02151 | C2H3g02090 | LOC_Os03g13160 | Os03g0234100 | - | Detail |
| CX3g028385 | 3:6,360,911-6,362,107 | + | C1H3g22268 | C2H3g20297 | LOC_Os03g13180 | Os03g0234500 | - | Detail |
| CX3g027164 | 3:6,363,878-6,368,555 | - | C1H3g22029 | C2H3g00447 | LOC_Os03g13190 | Os03g0234600 | - | Detail |
| CX3g030874 | 3:6,374,735-6,376,766 | - | C1H3g04582 | C2H3g06567 | LOC_Os03g13200 | Os03g0234900 | - | Detail |
| CX3g029207 | 3:6,378,367-6,380,080 | - | C1H3g27078 | C2H3g02755 | LOC_Os03g13210 | Os03g0235000 | - | Detail |
| CX3g031242 | 3:6,383,705-6,387,584 | + | C1H3g26089 | C2H3g08839 | LOC_Os03g13220 | Os03g0235100 | - | Detail |
| CX3g025226 | 3:6,388,902-6,390,830 | + | C1H3g13556 | C2H3g17418 | LOC_Os03g13230 | Os03g0235200 | - | Detail |
| CX3g028197 | 3:6,391,496-6,395,482 | - | C1H3g13432 | C2H3g00836 | LOC_Os03g13240 | Os03g0235300 | - | Detail |
| CX3g027179 | 3:6,396,462-6,402,616 | - | C1H3g17503 | C2H3g23746 | LOC_Os03g13250 | Os03g0235700 | - | Detail |
| CX3g029098 | 3:6,410,614-6,410,946 | - | C1H3g11550 | C2H3g04912 | LOC_Os03g13530 | Os03g0743650 | - | Detail |