| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H12g29942 | 12:4,589,116-4,591,397 | + | C2H12g21993 | CX12g015724 | LOC_Os12g10170 | Os12g0199500 | - | Detail |
| C1H12g23734 | 12:4,616,353-4,617,361 | - | C2H12g02513 | CX12g017268 | LOC_Os06g23340 | - | - | Detail |
| C1H12g26851 | 12:4,631,079-4,631,492 | - | C2H12g06069 | - | - | - | - | Detail |
| C1H12g08099 | 12:4,745,315-4,746,856 | + | C2H12g23156 | CX12g015438 | LOC_Os12g10140 | Os12g0202700 | - | Detail |
| C1H12g25986 | 12:4,747,716-4,748,767 | + | C2H12g10521 | CX12g015438 | LOC_Os12g10170 | Os12g0240900 | NOMT, OsNOMT, COMTL3, OsCOMTL3 | Detail |
| C1H12g24838 | 12:4,749,335-4,755,507 | - | C2H12g28534 | CX12g018391 | LOC_Os12g10180 | Os12g0202900 | - | Detail |
| C1H12g13815 | 12:4,756,959-4,759,016 | + | C2H12g14596 | CX12g015359 | LOC_Os12g10184 | Os12g0202850 | PGL12 | Detail |
| C1H12g15070 | 12:4,760,024-4,763,412 | + | C2H12g19800 | CX12g015359 | LOC_Os12g10190 | Os12g0203000 | - | Detail |
| C1H12g07643 | 12:4,764,423-4,766,881 | - | C2H12g26432 | CX12g015476 | LOC_Os12g10200 | Os12g0203100 | - | Detail |
| C1H12g30565 | 12:4,771,200-4,773,285 | + | C2H12g29948 | CX12g018695 | LOC_Os12g10220 | Os12g0203200 | - | Detail |
| C1H12g14694 | 12:4,800,328-4,800,810 | + | C2H12g27282 | CX12g017473 | LOC_Os12g10260 | Os12g0204000 | - | Detail |
| C1H12g14346 | 12:4,801,775-4,806,705 | + | C2H12g03169 | CX12g017473 | LOC_Os12g10270 | Os12g0632401 | - | Detail |
| C1H12g25521 | 12:4,811,369-4,814,332 | + | C2H12g06639 | CX12g015937 | LOC_Os12g10280 | Os12g0204100 | - | Detail |
| C1H12g12793 | 12:4,836,735-4,838,639 | - | C2H12g05093 | CX12g017749 | LOC_Os12g10330 | Os12g0204600 | - | Detail |
| C1H12g14579 | 12:4,842,518-4,844,473 | + | C2H12g02344 | CX12g015919 | LOC_Os12g10340 | Os12g0204800 | - | Detail |
| C1H12g02564 | 12:4,853,068-4,853,491 | - | C2H12g25946 | CX12g015129 | LOC_Os12g10360 | Os12g0204600 | - | Detail |
| C1H12g25059 | 12:4,855,166-4,855,744 | + | C2H12g14824 | - | LOC_Os12g10320 | Os12g0204500 | - | Detail |
| C1H12g01099 | 12:4,869,875-4,871,776 | - | C2H12g20127 | CX12g016073 | LOC_Os12g10390 | Os12g0204600 | - | Detail |
| C1H12g29266 | 12:4,880,354-4,886,434 | - | C2H12g17911 | CX12g018520 | LOC_Os12g10410 | Os12g0205500 | - | Detail |
| C1H12g30583 | 12:4,925,406-4,927,756 | - | C2H12g21157 | CX12g017375 | LOC_Os12g10520 | Os12g0206800 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g029569 | 3:6,303,237-6,304,958 | - | C1H3g01497 | C2H3g13166 | LOC_Os03g13030 | Os03g0232800 | - | Detail |
| CX3g027690 | 3:6,306,052-6,309,814 | - | C1H3g06697 | C2H3g05297 | LOC_Os03g13040 | Os03g0232900 | - | Detail |
| CX3g025209 | 3:6,308,144-6,308,644 | + | - | - | - | - | - | Detail |
| CX3g025391 | 3:6,322,656-6,323,810 | + | C1H3g26874 | C2H3g03038 | LOC_Os03g13050 | Os03g0233000 | - | Detail |
| CX3g030154 | 3:6,325,953-6,327,113 | - | C1H3g16800 | C2H3g18690 | LOC_Os03g13070 | Os03g0233200 | - | Detail |
| CX3g029185 | 3:6,328,301-6,330,181 | - | C1H3g06079 | C2H3g14812 | LOC_Os03g13080 | Os03g0233300 | OsLysM-RLK2, OsLYK5, OsNFR5/OsRLK2 | Detail |
| CX3g028548 | 3:6,335,026-6,338,543 | + | C1H3g06632 | C2H3g23005 | LOC_Os03g13100 | Os03g0233500 | - | Detail |
| CX3g029407 | 3:6,343,264-6,346,320 | + | C1H3g16553 | C2H3g09799 | LOC_Os03g13130 | Os03g0233800 | - | Detail |
| CX3g025432 | 3:6,347,254-6,348,096 | + | C1H3g27731 | C2H3g17247 | LOC_Os03g13140 | Os03g0233900 | Hb1, OsPgb1.1 | Detail |
| CX3g027207 | 3:6,350,996-6,351,870 | + | C1H3g19664 | C2H3g00667 | LOC_Os03g13150 | Os03g0234000 | - | Detail |
| CX3g030474 | 3:6,354,116-6,355,105 | + | C1H3g02151 | C2H3g02090 | LOC_Os03g13160 | Os03g0234100 | - | Detail |
| CX3g028385 | 3:6,360,911-6,362,107 | + | C1H3g22268 | C2H3g20297 | LOC_Os03g13180 | Os03g0234500 | - | Detail |
| CX3g027164 | 3:6,363,878-6,368,555 | - | C1H3g22029 | C2H3g00447 | LOC_Os03g13190 | Os03g0234600 | - | Detail |
| CX3g030874 | 3:6,374,735-6,376,766 | - | C1H3g04582 | C2H3g06567 | LOC_Os03g13200 | Os03g0234900 | - | Detail |
| CX3g029207 | 3:6,378,367-6,380,080 | - | C1H3g27078 | C2H3g02755 | LOC_Os03g13210 | Os03g0235000 | - | Detail |
| CX3g031242 | 3:6,383,705-6,387,584 | + | C1H3g26089 | C2H3g08839 | LOC_Os03g13220 | Os03g0235100 | - | Detail |
| CX3g025226 | 3:6,388,902-6,390,830 | + | C1H3g13556 | C2H3g17418 | LOC_Os03g13230 | Os03g0235200 | - | Detail |
| CX3g028197 | 3:6,391,496-6,395,482 | - | C1H3g13432 | C2H3g00836 | LOC_Os03g13240 | Os03g0235300 | - | Detail |
| CX3g027179 | 3:6,396,462-6,402,616 | - | C1H3g17503 | C2H3g23746 | LOC_Os03g13250 | Os03g0235700 | - | Detail |
| CX3g029098 | 3:6,410,614-6,410,946 | - | C1H3g11550 | C2H3g04912 | LOC_Os03g13530 | Os03g0743650 | - | Detail |