| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g16755 | 5:18,287,166-18,288,263 | + | - | - | LOC_Os01g64020 | Os01g0859500 | OsLG2, rLG2 | Detail |
| C2H5g21089 | 5:18,288,699-18,294,268 | + | C1H5g18939 | CX5g040832 | LOC_Os05g37170 | Os05g0443900 | OsLG2L | Detail |
| C2H5g30678 | 5:18,303,051-18,304,847 | + | C1H5g18403 | CX5g041157 | LOC_Os05g37190 | Os05g0444200 | - | Detail |
| C2H5g05442 | 5:18,316,352-18,319,231 | + | C1H5g26308 | CX5g039100 | LOC_Os05g37200 | Os05g0444300 | - | Detail |
| C2H5g26088 | 5:18,322,017-18,322,445 | + | - | - | - | - | - | Detail |
| C2H5g05266 | 5:18,324,473-18,328,483 | + | C1H5g17523 | CX5g039100 | LOC_Os05g37210 | Os05g0444500 | - | Detail |
| C2H5g02726 | 5:18,329,896-18,330,327 | - | C1H5g21085 | - | - | - | - | Detail |
| C2H5g19880 | 5:18,349,363-18,350,922 | + | C1H5g15251 | CX5g037707 | LOC_Os05g37250 | Os05g0445100 | - | Detail |
| C2H5g22436 | 5:18,362,467-18,364,605 | + | C1H5g10165 | CX5g036986 | LOC_Os05g37330 | Os05g0445500 | - | Detail |
| C2H5g19823 | 5:18,366,471-18,369,397 | + | C1H5g16582 | CX5g039380 | LOC_Os05g37340 | Os05g0445800 | - | Detail |
| C2H5g27548 | 5:18,370,558-18,381,564 | - | C1H5g23261 | CX5g037841 | LOC_Os05g37410 | Os05g0446600 | DNG704 | Detail |
| C2H5g29688 | 5:18,385,929-18,394,026 | - | C1H5g23416 | CX5g040916 | LOC_Os05g37434 | Os05g0446800 | - | Detail |
| C2H5g22596 | 5:18,397,594-18,399,967 | - | C1H5g20294 | CX5g040141 | LOC_Os05g37450 | Os05g0446900 | SBDCP2 | Detail |
| C2H5g12625 | 5:18,402,810-18,404,198 | - | C1H5g12434 | CX5g039543 | LOC_Os01g63800 | Os05g0447000 | - | Detail |
| C2H5g25449 | 5:18,410,080-18,415,878 | - | C1H5g27944 | CX5g036820 | LOC_Os05g37470 | Os05g0447200 | - | Detail |
| C2H5g25292 | 5:18,425,436-18,441,877 | - | C1H5g12420 | CX5g036851 | LOC_Os05g37500 | Os05g0447580 | - | Detail |
| C2H5g15162 | 5:18,445,977-18,448,203 | - | C1H5g24273 | CX5g040386 | LOC_Os05g37520 | Os05g0447700 | - | Detail |
| C2H5g07457 | 5:18,457,491-18,457,937 | + | - | CX5g039654 | LOC_Os05g37530 | Os05g0447800 | - | Detail |
| C2H5g12773 | 5:18,458,025-18,458,369 | + | - | - | - | - | - | Detail |
| C2H5g11261 | 5:18,464,827-18,468,904 | + | C1H5g03822 | CX5g039030 | LOC_Os05g37600 | Os05g0448300 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g029726 | 3:6,127,403-6,130,080 | + | C1H3g02612 | C2H3g25845 | LOC_Os03g12820 | Os03g0230300 | - | Detail |
| CX3g025129 | 3:6,132,010-6,132,339 | - | C1H3g04395 | C2H3g14412 | - | - | - | Detail |
| CX3g029537 | 3:6,134,522-6,139,283 | + | C1H3g30651 | C2H3g19351 | LOC_Os03g12840 | Os03g0230500 | DSM3, DSM3/OsITPK2, OsITL1, OsITPK2 | Detail |
| CX3g027449 | 3:6,142,780-6,142,953 | + | - | - | - | - | - | Detail |
| CX3g028083 | 3:6,167,452-6,168,834 | + | C1H3g20871 | C2H3g08152 | LOC_Os03g12860 | Os03g0231150 | - | Detail |
| CX3g030252 | 3:6,188,413-6,188,810 | + | - | - | - | Os03g0235400 | - | Detail |
| CX3g026479 | 3:6,190,226-6,192,618 | + | C1H3g09365 | C2H3g24795 | LOC_Os03g12890 | Os03g0231600 | OsBCAT2 | Detail |
| CX3g029672 | 3:6,195,226-6,204,465 | - | C1H3g26830 | C2H3g25882 | LOC_Os03g12910 | Os03g0231700 | - | Detail |
| CX3g030393 | 3:6,215,076-6,215,972 | - | C1H3g22291 | C2H3g02909 | LOC_Os08g01570 | Os03g0608700 | - | Detail |
| CX3g030123 | 3:6,216,353-6,216,604 | + | - | - | - | Os08g0106801 | - | Detail |
| CX3g027611 | 3:6,223,573-6,224,168 | - | C1H3g13331 | C2H3g00833 | LOC_Os03g12930 | Os03g0231900 | - | Detail |
| CX3g030152 | 3:6,227,075-6,228,515 | - | C1H3g17846 | C2H3g09594 | LOC_Os03g12940 | Os03g0231950 | - | Detail |
| CX3g030910 | 3:6,234,347-6,235,777 | - | C1H3g04613 | C2H3g04826 | LOC_Os03g12940 | Os03g0232000 | OsFBO13 | Detail |
| CX3g029956 | 3:6,241,174-6,244,882 | - | C1H3g30000 | C2H3g04774 | LOC_Os03g12950 | Os03g0232200 | - | Detail |
| CX3g029446 | 3:6,261,966-6,262,187 | + | C1H3g14582 | C2H4g11700 | - | Os02g0324200 | - | Detail |
| CX3g029518 | 3:6,269,413-6,269,712 | + | - | - | - | - | - | Detail |
| CX3g028212 | 3:6,273,054-6,273,482 | + | C1H3g07150 | C2H3g26123 | LOC_Os03g12990 | Os03g0232400 | - | Detail |
| CX3g028040 | 3:6,276,757-6,277,873 | - | C1H3g22613 | C2H3g04799 | - | Os10g0433200 | - | Detail |
| CX3g028651 | 3:6,278,152-6,280,898 | + | C1H3g28102 | C2H3g26449 | LOC_Os03g13000 | Os03g0232500 | - | Detail |
| CX3g031218 | 3:6,286,359-6,287,738 | - | C1H3g02271 | C2H3g15250 | LOC_Os03g13010 | Os03g0232600 | ELF1, OsPUB31, OsPUB75, TUD1, OsTUD1 | Detail |