| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g09671 | 3:25,345,746-25,349,279 | + | C1H3g28504 | CX3g027541 | LOC_Os03g48490 | Os03g0691500 | - | Detail |
| C2H3g02374 | 3:25,354,444-25,355,076 | + | - | - | - | - | - | Detail |
| C2H3g25810 | 3:25,363,324-25,370,149 | + | C1H3g22244 | CX3g025878 | LOC_Os03g48540 | Os03g0691800 | OsHIPL1 | Detail |
| C2H3g04588 | 3:25,373,167-25,376,764 | + | C1H3g29365 | CX3g028675 | LOC_Os03g48560 | Os03g0692000 | - | Detail |
| C2H3g07015 | 3:25,381,870-25,383,226 | - | C1H3g22267 | CX3g029610 | LOC_Os03g48570 | Os03g0692100 | - | Detail |
| C2H3g07879 | 3:25,390,356-25,391,856 | - | C1H3g08700 | CX3g030062 | LOC_Os03g48590 | Os03g0692300 | - | Detail |
| C2H3g17678 | 3:25,392,393-25,397,803 | - | C1H3g28949 | CX3g026552 | LOC_Os03g48600 | Os03g0692400 | - | Detail |
| C2H3g10834 | 3:25,401,996-25,407,021 | - | C1H3g19100 | CX3g027632 | LOC_Os03g48610 | Os03g0803600 | - | Detail |
| C2H3g04260 | 3:25,411,785-25,414,127 | - | C1H3g17419 | CX3g025938 | LOC_Os03g48626 | Os03g0692700 | - | Detail |
| C2H3g14908 | 3:25,416,166-25,416,702 | - | C1H3g28345 | CX3g031343 | LOC_Os03g48626 | Os03g0692700 | - | Detail |
| C2H3g05966 | 3:25,422,880-25,427,247 | - | C1H3g29633 | CX3g027481 | LOC_Os03g48660 | Os03g0693000 | - | Detail |
| C2H3g10021 | 3:25,445,554-25,446,069 | - | C1H3g04357 | CX3g030139 | LOC_Os03g48710 | Os03g0693400 | - | Detail |
| C2H3g05096 | 3:25,450,418-25,455,000 | + | C1H3g07784 | CX3g027310 | LOC_Os03g48740 | Os03g0693600 | OsIAGT1, OsIAAGLU | Detail |
| C2H3g22251 | 3:25,479,340-25,482,499 | + | C1H3g19279 | CX3g031355 | LOC_Os03g48810 | Os03g0694500 | - | Detail |
| C2H3g26534 | 3:25,494,089-25,501,795 | + | C1H3g26684 | CX3g030087 | LOC_Os03g48850 | Os03g0694900 | - | Detail |
| C2H3g18441 | 3:25,508,980-25,512,890 | + | C1H3g09569 | CX3g027739 | LOC_Os03g48920 | Os03g0695500 | - | Detail |
| C2H3g02189 | 3:25,512,976-25,515,282 | - | C1H3g24942 | CX3g031086 | LOC_Os03g48930 | Os03g0695600 | - | Detail |
| C2H3g02669 | 3:25,516,049-25,526,329 | - | C1H3g15935 | CX3g031322 | LOC_Os03g48940 | Os03g0695700 | - | Detail |
| C2H3g25659 | 3:25,529,271-25,530,179 | + | C1H3g18763 | CX3g027930 | LOC_Os03g48950 | Os03g0696000 | - | Detail |
| C2H3g00519 | 3:25,544,880-25,548,886 | + | C1H3g17032 | CX3g026991 | LOC_Os03g48970 | Os03g0696300 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g029726 | 3:6,127,403-6,130,080 | + | C1H3g02612 | C2H3g25845 | LOC_Os03g12820 | Os03g0230300 | - | Detail |
| CX3g025129 | 3:6,132,010-6,132,339 | - | C1H3g04395 | C2H3g14412 | - | - | - | Detail |
| CX3g029537 | 3:6,134,522-6,139,283 | + | C1H3g30651 | C2H3g19351 | LOC_Os03g12840 | Os03g0230500 | DSM3, DSM3/OsITPK2, OsITL1, OsITPK2 | Detail |
| CX3g027449 | 3:6,142,780-6,142,953 | + | - | - | - | - | - | Detail |
| CX3g028083 | 3:6,167,452-6,168,834 | + | C1H3g20871 | C2H3g08152 | LOC_Os03g12860 | Os03g0231150 | - | Detail |
| CX3g030252 | 3:6,188,413-6,188,810 | + | - | - | - | Os03g0235400 | - | Detail |
| CX3g026479 | 3:6,190,226-6,192,618 | + | C1H3g09365 | C2H3g24795 | LOC_Os03g12890 | Os03g0231600 | OsBCAT2 | Detail |
| CX3g029672 | 3:6,195,226-6,204,465 | - | C1H3g26830 | C2H3g25882 | LOC_Os03g12910 | Os03g0231700 | - | Detail |
| CX3g030393 | 3:6,215,076-6,215,972 | - | C1H3g22291 | C2H3g02909 | LOC_Os08g01570 | Os03g0608700 | - | Detail |
| CX3g030123 | 3:6,216,353-6,216,604 | + | - | - | - | Os08g0106801 | - | Detail |
| CX3g027611 | 3:6,223,573-6,224,168 | - | C1H3g13331 | C2H3g00833 | LOC_Os03g12930 | Os03g0231900 | - | Detail |
| CX3g030152 | 3:6,227,075-6,228,515 | - | C1H3g17846 | C2H3g09594 | LOC_Os03g12940 | Os03g0231950 | - | Detail |
| CX3g030910 | 3:6,234,347-6,235,777 | - | C1H3g04613 | C2H3g04826 | LOC_Os03g12940 | Os03g0232000 | OsFBO13 | Detail |
| CX3g029956 | 3:6,241,174-6,244,882 | - | C1H3g30000 | C2H3g04774 | LOC_Os03g12950 | Os03g0232200 | - | Detail |
| CX3g029446 | 3:6,261,966-6,262,187 | + | C1H3g14582 | C2H4g11700 | - | Os02g0324200 | - | Detail |
| CX3g029518 | 3:6,269,413-6,269,712 | + | - | - | - | - | - | Detail |
| CX3g028212 | 3:6,273,054-6,273,482 | + | C1H3g07150 | C2H3g26123 | LOC_Os03g12990 | Os03g0232400 | - | Detail |
| CX3g028040 | 3:6,276,757-6,277,873 | - | C1H3g22613 | C2H3g04799 | - | Os10g0433200 | - | Detail |
| CX3g028651 | 3:6,278,152-6,280,898 | + | C1H3g28102 | C2H3g26449 | LOC_Os03g13000 | Os03g0232500 | - | Detail |
| CX3g031218 | 3:6,286,359-6,287,738 | - | C1H3g02271 | C2H3g15250 | LOC_Os03g13010 | Os03g0232600 | ELF1, OsPUB31, OsPUB75, TUD1, OsTUD1 | Detail |