| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g24831 | 2:27,478,044-27,486,202 | + | C1H2g12998 | CX2g022881 | LOC_Os02g48790 | Os02g0719800 | - | Detail |
| C2H2g05712 | 2:27,490,145-27,492,681 | + | - | CX2g023559 | LOC_Os02g48810 | Os02g0720000 | - | Detail |
| C2H2g26609 | 2:27,494,224-27,494,951 | - | C1H2g04003 | CX2g023306 | LOC_Os02g48820 | Os02g0720100 | - | Detail |
| C2H2g17849 | 2:27,495,582-27,499,729 | + | C1H2g28119 | CX2g022662 | LOC_Os02g48830 | Os02g0720200 | - | Detail |
| C2H2g12963 | 2:27,500,482-27,503,249 | + | C1H2g04549 | CX2g023752 | LOC_Os02g48840 | Os02g0720300 | - | Detail |
| C2H2g12542 | 2:27,504,503-27,506,506 | + | C1H2g03370 | CX2g018926 | LOC_Os02g48850 | Os02g0720400 | - | Detail |
| C2H2g09168 | 2:27,507,218-27,509,532 | + | C1H2g06652 | CX2g020411 | LOC_Os02g48860 | Os02g0720500 | - | Detail |
| C2H2g25224 | 2:27,510,804-27,512,612 | - | C1H2g20338 | CX2g020891 | LOC_Os02g48870 | Os02g0720600 | - | Detail |
| C2H2g22396 | 2:27,518,175-27,523,243 | - | - | CX2g023341 | LOC_Os02g48880 | Os02g0720700 | - | Detail |
| C2H2g25425 | 2:27,527,639-27,532,891 | + | C1H2g28436 | CX2g021948 | LOC_Os02g48900 | Os02g0720900 | - | Detail |
| C2H2g11386 | 2:27,535,847-27,537,288 | - | C1H2g09094 | CX2g024396 | LOC_Os02g48910 | Os02g0721100 | - | Detail |
| C2H2g09000 | 2:27,540,545-27,541,234 | - | C1H2g12153 | CX2g021720 | LOC_Os02g48920 | Os02g0721200 | - | Detail |
| C2H2g01560 | 2:27,543,333-27,544,569 | - | C1H2g23667 | CX2g021720 | LOC_Os02g48950 | Os02g0721100 | - | Detail |
| C2H2g23285 | 2:27,545,202-27,552,369 | - | C1H2g21993 | - | LOC_Os02g48964 | Os02g0721600 | - | Detail |
| C2H2g14813 | 2:27,556,214-27,558,292 | - | C1H2g06282 | CX2g023863 | LOC_Os02g48980 | Os02g0721700 | - | Detail |
| C2H2g03395 | 2:27,559,468-27,565,589 | - | C1H2g28541 | CX2g019956 | LOC_Os02g48990 | Os02g0721800 | OsSec14-9 | Detail |
| C2H2g05054 | 2:27,568,445-27,573,477 | - | C1H2g27760 | CX2g018869 | LOC_Os02g49030 | Os02g0722001 | - | Detail |
| C2H2g12279 | 2:27,577,273-27,577,500 | - | - | - | - | Os02g0722350 | - | Detail |
| C2H2g28450 | 2:27,582,492-27,588,948 | + | C1H2g27060 | CX2g020972 | LOC_Os02g49060 | Os02g0722400 | - | Detail |
| C2H2g03918 | 2:27,589,337-27,595,897 | - | C1H2g28181 | CX2g019945 | LOC_Os02g49070 | Os02g0722500 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g031339 | 3:5,925,173-5,928,614 | - | C1H3g19915 | C2H3g04602 | LOC_Os03g12620 | Os03g0227400 | - | Detail |
| CX3g031299 | 3:5,941,412-5,941,927 | - | - | C2H3g14769 | LOC_Os03g07739 | Os03g0173500 | - | Detail |
| CX3g027265 | 3:5,943,108-5,946,567 | + | C1H3g13701 | C2H3g27028 | LOC_Os03g12630 | Os03g0227500 | - | Detail |
| CX3g027504 | 3:5,963,114-5,969,663 | + | C1H3g10637 | C2H3g25912 | LOC_Os03g12660 | Os03g0227700 | OsDWF4, OsDWARF4, CYP90B2 | Detail |
| CX3g030163 | 3:5,971,437-5,971,685 | - | - | - | - | Os03g0227750 | - | Detail |
| CX3g025096 | 3:5,972,490-5,972,702 | + | - | C2H3g15726 | LOC_Os03g12670 | - | - | Detail |
| CX3g027410 | 3:5,977,974-5,982,482 | - | C1H3g15751 | C2H3g22097 | LOC_Os03g12680 | Os03g0227900 | - | Detail |
| CX3g026331 | 3:5,994,349-5,995,349 | - | C1H3g25563 | C2H3g16447 | LOC_Os03g12700 | Os03g0228200 | - | Detail |
| CX3g026814 | 3:5,998,262-5,999,746 | + | C1H3g16232 | C2H3g25355 | LOC_Os03g12710 | Os03g0228400 | - | Detail |
| CX3g025837 | 3:6,002,609-6,003,267 | - | C1H3g10418 | - | LOC_Os03g02370 | - | - | Detail |
| CX3g031224 | 3:6,025,544-6,028,555 | + | C1H3g23512 | C2H3g13539 | LOC_Os03g12720 | Os03g0228500 | - | Detail |
| CX3g029566 | 3:6,034,971-6,035,150 | + | - | - | - | - | - | Detail |
| CX3g027642 | 3:6,043,327-6,046,787 | - | C1H3g12564 | C2H3g13159 | LOC_Os03g12730 | Os03g0228800 | OsBRR1 | Detail |
| CX3g028683 | 3:6,057,548-6,058,668 | - | C1H3g01094 | C2H3g13186 | LOC_Os03g12760 | Os03g0229100 | - | Detail |
| CX3g029657 | 3:6,085,424-6,088,003 | - | C1H3g22208 | C2H3g28054 | LOC_Os03g12790 | Os03g0229500 | GS3.1 | Detail |
| CX3g026519 | 3:6,089,516-6,089,713 | - | - | - | - | - | - | Detail |
| CX3g031223 | 3:6,096,000-6,096,269 | - | C1H3g02835 | C2H3g29189 | - | Os03g0229575 | - | Detail |
| CX3g025778 | 3:6,104,045-6,107,300 | - | C1H3g05308 | C2H3g27019 | LOC_Os03g12810 | Os03g0229600 | - | Detail |
| CX3g030770 | 3:6,108,574-6,108,744 | + | - | - | - | Os03g0229801 | - | Detail |
| CX3g027634 | 3:6,114,109-6,114,408 | + | - | - | - | - | - | Detail |