| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H6g14283 | 6:1,439,700-1,440,683 | - | C1H6g20269 | - | - | - | - | Detail |
| C2H6g05549 | 6:1,440,770-1,446,092 | - | C1H6g03688 | CX6g043470 | LOC_Os06g04600 | Os06g0137500 | - | Detail |
| C2H6g21165 | 6:1,446,868-1,449,715 | + | C1H6g19756 | CX6g042032 | LOC_Os06g04610 | Os06g0137600 | - | Detail |
| C2H6g25322 | 6:1,455,128-1,456,258 | + | C1H6g26864 | CX6g045659 | LOC_Os06g04620 | Os06g0137700 | - | Detail |
| C2H6g11346 | 6:1,458,981-1,463,304 | + | C1H6g15651 | CX6g042092 | LOC_Os06g04640 | Os06g0138000 | - | Detail |
| C2H6g15488 | 6:1,464,031-1,465,742 | - | C1H6g27478 | CX6g043067 | LOC_Os06g04650 | Os06g0138100 | - | Detail |
| C2H6g16932 | 6:1,466,102-1,470,352 | + | C1H6g25263 | CX6g041227 | LOC_Os06g04660 | Os06g0138200 | - | Detail |
| C2H6g00635 | 6:1,472,371-1,473,384 | + | C1H6g22039 | CX6g044072 | LOC_Os06g04670 | Os06g0138400 | - | Detail |
| C2H6g07751 | 6:1,475,754-1,476,908 | - | - | CX6g043184 | LOC_Os06g04680 | Os06g0138600 | - | Detail |
| C2H6g23253 | 6:1,478,180-1,479,059 | + | C1H6g02705 | CX6g044076 | LOC_Os06g04780 | Os06g0139700 | - | Detail |
| C2H6g27077 | 6:1,480,610-1,481,421 | - | - | CX3g028335 | - | - | - | Detail |
| C2H6g07231 | 6:1,482,384-1,483,229 | + | C1H6g05873 | - | LOC_Os06g04699 | Os06g0139150 | - | Detail |
| C2H6g10016 | 6:1,484,849-1,490,208 | - | C1H6g03863 | CX6g044459 | LOC_Os06g04690 | Os06g0139000 | DDF1 | Detail |
| C2H6g03556 | 6:1,494,111-1,494,542 | + | C1H6g19963 | - | LOC_Os06g04760 | - | - | Detail |
| C2H6g10420 | 6:1,496,862-1,499,513 | + | C1H6g18760 | CX6g044076 | LOC_Os06g04780 | Os06g0139700 | - | Detail |
| C2H6g16226 | 6:1,501,211-1,502,283 | + | C1H6g11816 | CX6g044405 | LOC_Os06g04790 | Os06g0139800 | - | Detail |
| C2H6g23209 | 6:1,503,695-1,506,969 | - | C1H6g26349 | CX6g045953 | LOC_Os06g04800 | Os06g0139900 | - | Detail |
| C2H6g14757 | 6:1,512,496-1,517,560 | - | C1H6g08381 | - | LOC_Os06g04820 | Os06g0140100 | spd6 | Detail |
| C2H6g06933 | 6:1,519,276-1,522,230 | - | C1H6g18150 | CX6g044242 | LOC_Os06g04830 | Os06g0140200 | OsRLP1 | Detail |
| C2H6g30511 | 6:1,525,570-1,529,241 | - | C1H6g18150 | CX6g045474 | LOC_Os06g04840 | Os06g0140300 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g031339 | 3:5,925,173-5,928,614 | - | C1H3g19915 | C2H3g04602 | LOC_Os03g12620 | Os03g0227400 | - | Detail |
| CX3g031299 | 3:5,941,412-5,941,927 | - | - | C2H3g14769 | LOC_Os03g07739 | Os03g0173500 | - | Detail |
| CX3g027265 | 3:5,943,108-5,946,567 | + | C1H3g13701 | C2H3g27028 | LOC_Os03g12630 | Os03g0227500 | - | Detail |
| CX3g027504 | 3:5,963,114-5,969,663 | + | C1H3g10637 | C2H3g25912 | LOC_Os03g12660 | Os03g0227700 | OsDWF4, OsDWARF4, CYP90B2 | Detail |
| CX3g030163 | 3:5,971,437-5,971,685 | - | - | - | - | Os03g0227750 | - | Detail |
| CX3g025096 | 3:5,972,490-5,972,702 | + | - | C2H3g15726 | LOC_Os03g12670 | - | - | Detail |
| CX3g027410 | 3:5,977,974-5,982,482 | - | C1H3g15751 | C2H3g22097 | LOC_Os03g12680 | Os03g0227900 | - | Detail |
| CX3g026331 | 3:5,994,349-5,995,349 | - | C1H3g25563 | C2H3g16447 | LOC_Os03g12700 | Os03g0228200 | - | Detail |
| CX3g026814 | 3:5,998,262-5,999,746 | + | C1H3g16232 | C2H3g25355 | LOC_Os03g12710 | Os03g0228400 | - | Detail |
| CX3g025837 | 3:6,002,609-6,003,267 | - | C1H3g10418 | - | LOC_Os03g02370 | - | - | Detail |
| CX3g031224 | 3:6,025,544-6,028,555 | + | C1H3g23512 | C2H3g13539 | LOC_Os03g12720 | Os03g0228500 | - | Detail |
| CX3g029566 | 3:6,034,971-6,035,150 | + | - | - | - | - | - | Detail |
| CX3g027642 | 3:6,043,327-6,046,787 | - | C1H3g12564 | C2H3g13159 | LOC_Os03g12730 | Os03g0228800 | OsBRR1 | Detail |
| CX3g028683 | 3:6,057,548-6,058,668 | - | C1H3g01094 | C2H3g13186 | LOC_Os03g12760 | Os03g0229100 | - | Detail |
| CX3g029657 | 3:6,085,424-6,088,003 | - | C1H3g22208 | C2H3g28054 | LOC_Os03g12790 | Os03g0229500 | GS3.1 | Detail |
| CX3g026519 | 3:6,089,516-6,089,713 | - | - | - | - | - | - | Detail |
| CX3g031223 | 3:6,096,000-6,096,269 | - | C1H3g02835 | C2H3g29189 | - | Os03g0229575 | - | Detail |
| CX3g025778 | 3:6,104,045-6,107,300 | - | C1H3g05308 | C2H3g27019 | LOC_Os03g12810 | Os03g0229600 | - | Detail |
| CX3g030770 | 3:6,108,574-6,108,744 | + | - | - | - | Os03g0229801 | - | Detail |
| CX3g027634 | 3:6,114,109-6,114,408 | + | - | - | - | - | - | Detail |