| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g10609 | 3:13,084,893-13,085,765 | - | C2H3g00617 | CX3g030534 | LOC_Os03g25550 | Os03g0371800 | - | Detail |
| C1H3g16595 | 3:13,085,830-13,086,327 | - | C2H3g00617 | CX3g030534 | LOC_Os03g25550 | Os03g0371800 | - | Detail |
| C1H3g09237 | 3:13,125,177-13,133,800 | + | C2H3g13066 | CX3g030141 | LOC_Os03g25600 | Os03g0821300 | - | Detail |
| C1H3g20988 | 3:13,136,297-13,136,900 | - | C2H3g24461 | CX3g030815 | LOC_Os03g25610 | Os03g0372600 | - | Detail |
| C1H3g26671 | 3:13,139,232-13,142,571 | + | C2H3g09558 | CX3g025086 | LOC_Os03g25620 | Os03g0372700 | - | Detail |
| C1H3g02459 | 3:13,166,542-13,170,433 | - | C2H3g30423 | CX3g029031 | LOC_Os03g25720 | Os03g0374100 | - | Detail |
| C1H3g03430 | 3:13,174,979-13,178,588 | + | C2H3g09363 | CX3g025872 | LOC_Os03g25750 | Os03g0374400 | - | Detail |
| C1H3g29992 | 3:13,180,001-13,182,532 | - | C2H3g02420 | CX3g031135 | LOC_Os03g25760 | Os03g0374500 | OsIQM3 | Detail |
| C1H3g04281 | 3:13,193,090-13,195,387 | - | C2H3g06785 | CX3g028239 | LOC_Os03g25770 | Os03g0374575 | OsSCL26 | Detail |
| C1H3g12991 | 3:13,200,156-13,205,327 | + | C2H3g13807 | CX3g025908 | LOC_Os03g25790 | Os03g0374600 | - | Detail |
| C1H3g11329 | 3:13,211,637-13,212,344 | - | C2H3g07823 | CX3g031122 | LOC_Os03g25820 | Os03g0375900 | - | Detail |
| C1H3g18047 | 3:13,225,800-13,226,291 | - | C2H3g13273 | CX3g031122 | LOC_Os03g25820 | Os03g0375900 | - | Detail |
| C1H3g22864 | 3:13,232,497-13,233,498 | - | C2H3g09283 | CX3g031122 | LOC_Os03g25869 | Os03g0375300 | - | Detail |
| C1H3g05274 | 3:13,243,391-13,246,165 | - | C2H3g17665 | CX3g025557 | LOC_Os03g25920 | Os03g0375966 | - | Detail |
| C1H3g13157 | 3:13,251,260-13,254,412 | - | C2H3g22221 | CX3g028356 | LOC_Os03g25930 | Os03g0376000 | - | Detail |
| C1H3g30616 | 3:13,257,477-13,261,052 | - | C2H3g00210 | CX3g030420 | LOC_Os03g25940 | Os03g0376100 | - | Detail |
| C1H3g18959 | 3:13,268,397-13,270,478 | - | C2H3g30664 | CX3g029886 | LOC_Os03g25960 | Os03g0376600 | OsRRM2 | Detail |
| C1H3g09004 | 3:13,278,445-13,282,986 | - | C2H3g23850 | CX3g027038 | LOC_Os03g25970 | Os03g0376800 | - | Detail |
| C1H3g26655 | 3:13,284,368-13,289,138 | + | C2H3g09355 | CX3g029788 | LOC_Os03g25980 | Os03g0376900 | - | Detail |
| C1H3g07493 | 3:13,299,871-13,300,470 | + | C2H3g25053 | CX3g029933 | LOC_Os03g25990 | Os03g0377100 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g031339 | 3:5,925,173-5,928,614 | - | C1H3g19915 | C2H3g04602 | LOC_Os03g12620 | Os03g0227400 | - | Detail |
| CX3g031299 | 3:5,941,412-5,941,927 | - | - | C2H3g14769 | LOC_Os03g07739 | Os03g0173500 | - | Detail |
| CX3g027265 | 3:5,943,108-5,946,567 | + | C1H3g13701 | C2H3g27028 | LOC_Os03g12630 | Os03g0227500 | - | Detail |
| CX3g027504 | 3:5,963,114-5,969,663 | + | C1H3g10637 | C2H3g25912 | LOC_Os03g12660 | Os03g0227700 | OsDWF4, OsDWARF4, CYP90B2 | Detail |
| CX3g030163 | 3:5,971,437-5,971,685 | - | - | - | - | Os03g0227750 | - | Detail |
| CX3g025096 | 3:5,972,490-5,972,702 | + | - | C2H3g15726 | LOC_Os03g12670 | - | - | Detail |
| CX3g027410 | 3:5,977,974-5,982,482 | - | C1H3g15751 | C2H3g22097 | LOC_Os03g12680 | Os03g0227900 | - | Detail |
| CX3g026331 | 3:5,994,349-5,995,349 | - | C1H3g25563 | C2H3g16447 | LOC_Os03g12700 | Os03g0228200 | - | Detail |
| CX3g026814 | 3:5,998,262-5,999,746 | + | C1H3g16232 | C2H3g25355 | LOC_Os03g12710 | Os03g0228400 | - | Detail |
| CX3g025837 | 3:6,002,609-6,003,267 | - | C1H3g10418 | - | LOC_Os03g02370 | - | - | Detail |
| CX3g031224 | 3:6,025,544-6,028,555 | + | C1H3g23512 | C2H3g13539 | LOC_Os03g12720 | Os03g0228500 | - | Detail |
| CX3g029566 | 3:6,034,971-6,035,150 | + | - | - | - | - | - | Detail |
| CX3g027642 | 3:6,043,327-6,046,787 | - | C1H3g12564 | C2H3g13159 | LOC_Os03g12730 | Os03g0228800 | OsBRR1 | Detail |
| CX3g028683 | 3:6,057,548-6,058,668 | - | C1H3g01094 | C2H3g13186 | LOC_Os03g12760 | Os03g0229100 | - | Detail |
| CX3g029657 | 3:6,085,424-6,088,003 | - | C1H3g22208 | C2H3g28054 | LOC_Os03g12790 | Os03g0229500 | GS3.1 | Detail |
| CX3g026519 | 3:6,089,516-6,089,713 | - | - | - | - | - | - | Detail |
| CX3g031223 | 3:6,096,000-6,096,269 | - | C1H3g02835 | C2H3g29189 | - | Os03g0229575 | - | Detail |
| CX3g025778 | 3:6,104,045-6,107,300 | - | C1H3g05308 | C2H3g27019 | LOC_Os03g12810 | Os03g0229600 | - | Detail |
| CX3g030770 | 3:6,108,574-6,108,744 | + | - | - | - | Os03g0229801 | - | Detail |
| CX3g027634 | 3:6,114,109-6,114,408 | + | - | - | - | - | - | Detail |