| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g16412 | 3:8,536,317-8,539,001 | + | C1H3g04825 | CX3g025299 | LOC_Os03g17490 | Os03g0283300 | - | Detail |
| C2H3g25427 | 3:8,540,073-8,542,069 | - | C1H3g31389 | CX3g029292 | LOC_Os03g17500 | Os03g0283400 | - | Detail |
| C2H3g26100 | 3:8,545,546-8,547,342 | - | C1H3g29978 | CX3g030457 | LOC_Os03g17510 | Os03g0283500 | - | Detail |
| C2H3g10500 | 3:8,547,644-8,551,927 | - | C1H3g13527 | CX3g030456 | LOC_Os03g17520 | Os03g0283600 | - | Detail |
| C2H3g23371 | 3:8,562,735-8,570,128 | + | C1H3g19722 | CX3g026672 | LOC_Os03g17540 | Os03g0283800 | - | Detail |
| C2H3g29700 | 3:8,575,417-8,578,781 | - | C1H3g11797 | CX3g029803 | LOC_Os03g17550 | Os03g0283900 | - | Detail |
| C2H3g23379 | 3:8,578,835-8,582,071 | + | C1H3g07283 | CX3g025210 | LOC_Os03g17560 | Os03g0284000 | - | Detail |
| C2H3g10813 | 3:8,582,674-8,591,967 | - | C1H3g27931 | CX3g025348 | LOC_Os03g17570 | Os03g0284100 | OsPRR73, OsCCT11 | Detail |
| C2H3g28337 | 3:8,602,238-8,602,906 | - | C1H3g12560 | CX3g026952 | LOC_Os03g17580 | Os03g0284400 | - | Detail |
| C2H3g30073 | 3:8,604,510-8,608,088 | - | C1H3g02152 | CX3g030728 | LOC_Os03g17590 | Os03g0284500 | - | Detail |
| C2H3g08600 | 3:8,608,868-8,611,833 | + | C1H3g05023 | CX3g026963 | LOC_Os03g17600 | Os03g0284600 | - | Detail |
| C2H3g03614 | 3:8,614,271-8,615,676 | + | C1H3g06994 | CX3g025121 | - | Os03g0284700 | - | Detail |
| C2H3g12259 | 3:8,616,844-8,618,163 | + | C1H3g21431 | CX3g025050 | LOC_Os03g17610 | Os03g0284800 | TOP6A3 | Detail |
| C2H3g11357 | 3:8,618,693-8,632,387 | - | C1H3g26561 | CX3g026635 | LOC_Os03g17634 | Os03g0284900 | - | Detail |
| C2H3g28206 | 3:8,633,086-8,635,359 | + | C1H3g30930 | CX3g031354 | LOC_Os03g17660 | Os03g0285100 | - | Detail |
| C2H3g03876 | 3:8,637,543-8,637,710 | + | C1H3g11566 | CX3g026969 | LOC_Os03g17670 | Os03g0285200 | - | Detail |
| C2H3g05962 | 3:8,641,796-8,641,999 | + | C1H3g09547 | - | LOC_Os03g17680 | Os03g0285300 | - | Detail |
| C2H3g06105 | 3:8,651,135-8,654,478 | + | C1H3g07669 | CX3g026553 | LOC_Os03g17690 | Os03g0285700 | OsAPXa, OsAPX1 | Detail |
| C2H3g17399 | 3:8,655,394-8,658,115 | - | C1H3g30823 | CX3g029338 | LOC_Os03g17700 | Os03g0285800 | - | Detail |
| C2H3g05165 | 3:8,660,950-8,664,020 | - | C1H3g12993 | CX3g029635 | LOC_Os03g17710 | Os03g0285900 | OsRS2Z38 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g029397 | 3:5,761,227-5,764,213 | + | C1H3g05662 | C2H3g20060 | LOC_Os03g12320 | Os03g0223900 | OsLPXC | Detail |
| CX3g029992 | 3:5,774,892-5,779,245 | + | C1H3g16565 | C2H3g29213 | LOC_Os03g12350 | Os03g0224200 | - | Detail |
| CX3g029383 | 3:5,780,831-5,784,143 | - | C1H3g12418 | C2H3g11335 | LOC_Os03g12360 | Os03g0224300 | - | Detail |
| CX3g025920 | 3:5,796,849-5,799,360 | + | C1H3g18389 | C2H3g05885 | LOC_Os03g12370 | Os03g0224700 | - | Detail |
| CX3g025136 | 3:5,804,474-5,805,493 | - | C1H3g09012 | C2H3g25300 | LOC_Os03g12390 | Os03g0225100 | MPKK10.2, OsMKK10-2, MKK10-2D | Detail |
| CX3g027495 | 3:5,812,870-5,816,693 | - | C1H3g14793 | C2H3g05543 | LOC_Os03g12414 | Os03g0225200 | - | Detail |
| CX3g027176 | 3:5,818,154-5,819,566 | - | C1H3g12506 | C2H3g22350 | LOC_Os03g12430 | Os03g0225300 | - | Detail |
| CX3g025280 | 3:5,822,363-5,824,763 | + | C1H3g23318 | C2H3g03359 | LOC_Os03g12440 | - | - | Detail |
| CX3g030046 | 3:5,826,086-5,834,450 | + | C1H3g17135 | C2H3g24748 | LOC_Os03g12450 | Os03g0225500 | - | Detail |
| CX3g028144 | 3:5,835,584-5,841,857 | + | C1H3g25680 | C2H3g09129 | LOC_Os03g12460 | Os03g0225600 | - | Detail |
| CX3g025098 | 3:5,843,739-5,848,413 | + | C1H3g10808 | C2H3g02566 | LOC_Os03g12470 | Os03g0225700 | WAK25, OsWAK25 | Detail |
| CX3g026153 | 3:5,861,373-5,862,224 | - | C1H3g02465 | C2H3g10692 | LOC_Os03g12510 | Os03g0226200 | Hb2, OsPgb1.2 | Detail |
| CX3g028573 | 3:5,863,694-5,866,110 | + | C1H3g31559 | C2H3g15869 | LOC_Os03g12520 | Os03g0226300 | - | Detail |
| CX3g027606 | 3:5,872,059-5,876,162 | + | C1H3g15877 | C2H3g29082 | LOC_Os03g12530 | Os03g0226400 | - | Detail |
| CX3g025975 | 3:5,883,076-5,889,445 | + | C1H3g27940 | C2H3g13286 | LOC_Os03g12550 | Os03g0226600 | - | Detail |
| CX3g027982 | 3:5,890,409-5,892,201 | - | C1H3g15687 | C2H3g30568 | LOC_Os03g12560 | Os03g0226700 | - | Detail |
| CX3g024984 | 3:5,893,447-5,899,229 | + | C1H3g18854 | C2H3g00790 | LOC_Os03g12570 | Os03g0226800 | CMT3b | Detail |
| CX3g027871 | 3:5,900,388-5,903,199 | + | C1H3g26728 | C2H3g22427 | LOC_Os03g12570 | Os03g0226901 | - | Detail |
| CX3g030829 | 3:5,907,319-5,914,142 | + | C1H3g26232 | C2H3g07335 | LOC_Os03g12590 | Os03g0227000 | - | Detail |
| CX3g026050 | 3:5,917,366-5,924,697 | + | C1H3g22048 | C2H3g16667 | LOC_Os03g12610 | Os03g0227300 | - | Detail |