| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g13595 | 2:30,672,971-30,676,645 | - | C1H2g13978 | CX2g023263 | LOC_Os02g55000 | Os02g0793000 | - | Detail |
| C2H2g11361 | 2:30,678,108-30,684,211 | + | C1H2g23083 | CX2g023329 | LOC_Os02g55010 | Os02g0793100 | - | Detail |
| C2H2g03443 | 2:30,684,564-30,685,952 | + | C1H2g03769 | CX2g020457 | LOC_Os02g55020 | Os02g0793200 | - | Detail |
| C2H2g27988 | 2:30,688,013-30,697,629 | + | C1H2g27806 | CX2g019210 | LOC_Os02g55030 | Os02g0793300 | OsNUDX2 | Detail |
| C2H2g13996 | 2:30,697,766-30,698,344 | + | C1H2g11432 | CX2g021432 | - | Os02g0793400 | - | Detail |
| C2H2g17396 | 2:30,698,385-30,698,873 | + | C1H2g11432 | CX2g021432 | LOC_Os02g55040 | Os02g0793400 | - | Detail |
| C2H2g28706 | 2:30,700,465-30,700,773 | + | C1H2g04851 | CX2g020602 | LOC_Os02g55060 | Os02g0793700 | - | Detail |
| C2H2g16711 | 2:30,703,570-30,707,111 | + | C1H2g11727 | CX2g022287 | LOC_Os02g55070 | Os02g0793800 | - | Detail |
| C2H2g15718 | 2:30,708,126-30,710,753 | - | C1H2g10292 | CX2g018978 | LOC_Os02g55080 | Os02g0793900 | HDR1 | Detail |
| C2H2g17917 | 2:30,711,981-30,715,096 | - | C1H2g00256 | CX2g023131 | LOC_Os02g55090 | Os02g0794000 | - | Detail |
| C2H2g23731 | 2:30,723,821-30,730,370 | + | C1H2g03550 | CX2g020328 | LOC_Os02g55110 | Os02g0794300 | - | Detail |
| C2H2g09037 | 2:30,730,983-30,734,539 | - | C1H2g16002 | CX2g018923 | LOC_Os02g55120 | Os02g0794400 | - | Detail |
| C2H2g28366 | 2:30,745,352-30,746,751 | + | C1H2g16803 | CX2g023261 | LOC_Os02g55130 | Os02g0794500 | - | Detail |
| C2H2g07938 | 2:30,749,141-30,751,600 | + | C1H2g16803 | CX2g023261 | LOC_Os02g55130 | Os02g0794500 | - | Detail |
| C2H2g15052 | 2:30,752,267-30,752,485 | - | - | CX2g022570 | LOC_Os02g55134 | Os02g0794600 | - | Detail |
| C2H2g20517 | 2:30,755,313-30,758,696 | - | C1H2g07019 | CX2g019456 | LOC_Os02g55140 | Os02g0794700 | - | Detail |
| C2H2g27240 | 2:30,761,685-30,776,913 | - | C1H2g19162 | CX2g023387 | LOC_Os02g55170 | Os02g0794900 | - | Detail |
| C2H2g27629 | 2:30,779,421-30,785,859 | + | C1H2g02560 | CX2g020021 | LOC_Os02g55180 | Os02g0795000 | - | Detail |
| C2H2g29909 | 2:30,787,233-30,788,488 | + | C1H2g12160 | CX2g023235 | LOC_Os02g55190 | Os02g0795200 | - | Detail |
| C2H2g28187 | 2:30,789,244-30,793,833 | - | C1H2g23071 | CX2g023952 | LOC_Os02g55200 | Os02g0795300 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g029397 | 3:5,761,227-5,764,213 | + | C1H3g05662 | C2H3g20060 | LOC_Os03g12320 | Os03g0223900 | OsLPXC | Detail |
| CX3g029992 | 3:5,774,892-5,779,245 | + | C1H3g16565 | C2H3g29213 | LOC_Os03g12350 | Os03g0224200 | - | Detail |
| CX3g029383 | 3:5,780,831-5,784,143 | - | C1H3g12418 | C2H3g11335 | LOC_Os03g12360 | Os03g0224300 | - | Detail |
| CX3g025920 | 3:5,796,849-5,799,360 | + | C1H3g18389 | C2H3g05885 | LOC_Os03g12370 | Os03g0224700 | - | Detail |
| CX3g025136 | 3:5,804,474-5,805,493 | - | C1H3g09012 | C2H3g25300 | LOC_Os03g12390 | Os03g0225100 | MPKK10.2, OsMKK10-2, MKK10-2D | Detail |
| CX3g027495 | 3:5,812,870-5,816,693 | - | C1H3g14793 | C2H3g05543 | LOC_Os03g12414 | Os03g0225200 | - | Detail |
| CX3g027176 | 3:5,818,154-5,819,566 | - | C1H3g12506 | C2H3g22350 | LOC_Os03g12430 | Os03g0225300 | - | Detail |
| CX3g025280 | 3:5,822,363-5,824,763 | + | C1H3g23318 | C2H3g03359 | LOC_Os03g12440 | - | - | Detail |
| CX3g030046 | 3:5,826,086-5,834,450 | + | C1H3g17135 | C2H3g24748 | LOC_Os03g12450 | Os03g0225500 | - | Detail |
| CX3g028144 | 3:5,835,584-5,841,857 | + | C1H3g25680 | C2H3g09129 | LOC_Os03g12460 | Os03g0225600 | - | Detail |
| CX3g025098 | 3:5,843,739-5,848,413 | + | C1H3g10808 | C2H3g02566 | LOC_Os03g12470 | Os03g0225700 | WAK25, OsWAK25 | Detail |
| CX3g026153 | 3:5,861,373-5,862,224 | - | C1H3g02465 | C2H3g10692 | LOC_Os03g12510 | Os03g0226200 | Hb2, OsPgb1.2 | Detail |
| CX3g028573 | 3:5,863,694-5,866,110 | + | C1H3g31559 | C2H3g15869 | LOC_Os03g12520 | Os03g0226300 | - | Detail |
| CX3g027606 | 3:5,872,059-5,876,162 | + | C1H3g15877 | C2H3g29082 | LOC_Os03g12530 | Os03g0226400 | - | Detail |
| CX3g025975 | 3:5,883,076-5,889,445 | + | C1H3g27940 | C2H3g13286 | LOC_Os03g12550 | Os03g0226600 | - | Detail |
| CX3g027982 | 3:5,890,409-5,892,201 | - | C1H3g15687 | C2H3g30568 | LOC_Os03g12560 | Os03g0226700 | - | Detail |
| CX3g024984 | 3:5,893,447-5,899,229 | + | C1H3g18854 | C2H3g00790 | LOC_Os03g12570 | Os03g0226800 | CMT3b | Detail |
| CX3g027871 | 3:5,900,388-5,903,199 | + | C1H3g26728 | C2H3g22427 | LOC_Os03g12570 | Os03g0226901 | - | Detail |
| CX3g030829 | 3:5,907,319-5,914,142 | + | C1H3g26232 | C2H3g07335 | LOC_Os03g12590 | Os03g0227000 | - | Detail |
| CX3g026050 | 3:5,917,366-5,924,697 | + | C1H3g22048 | C2H3g16667 | LOC_Os03g12610 | Os03g0227300 | - | Detail |