| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H12g22288 | 12:15,045,038-15,054,574 | - | C2H12g17196 | CX12g017166 | LOC_Os12g29350 | Os12g0477700 | - | Detail |
| C1H12g13264 | 12:15,073,917-15,075,542 | - | C2H12g03246 | CX12g017957 | LOC_Os12g29400 | - | - | Detail |
| C1H12g24621 | 12:15,091,433-15,094,217 | + | C2H12g10440 | CX12g018371 | LOC_Os12g29430 | Os12g0478400 | - | Detail |
| C1H12g21784 | 12:15,110,872-15,111,291 | - | C2H12g04175 | CX12g018080 | LOC_Os12g29450 | - | - | Detail |
| C1H12g20599 | 12:15,133,400-15,134,056 | + | C2H12g10949 | CX12g018113 | LOC_Os12g29480 | Os12g0478900 | - | Detail |
| C1H12g00537 | 12:15,140,089-15,141,200 | - | C2H12g13424 | - | - | - | - | Detail |
| C1H12g10683 | 12:15,156,064-15,156,711 | - | C2H12g12179 | CX12g015373 | LOC_Os12g29500 | Os12g0479100 | - | Detail |
| C1H12g11280 | 12:15,183,573-15,189,555 | - | C2H12g13022 | CX12g017952 | LOC_Os12g29520 | Os12g0479400 | - | Detail |
| C1H12g26255 | 12:15,216,778-15,223,163 | + | C2H12g24396 | CX12g017373 | LOC_Os12g29550 | Os12g0479900 | - | Detail |
| C1H12g19180 | 12:15,223,895-15,228,373 | + | C2H12g19344 | CX12g018470 | LOC_Os12g29560 | Os12g0480000 | OsDHHC30 | Detail |
| C1H12g17150 | 12:15,229,098-15,229,672 | + | C2H12g22844 | CX12g017916 | LOC_Os12g29570 | Os12g0480100 | - | Detail |
| C1H12g26749 | 12:15,232,614-15,237,040 | - | C2H12g24381 | CX12g016037 | LOC_Os12g29580 | Os12g0480200 | OsAGC24 | Detail |
| C1H12g28875 | 12:15,273,233-15,274,752 | + | C2H12g07625 | CX12g016517 | LOC_Os12g29620 | Os12g0480800 | - | Detail |
| C1H12g14067 | 12:15,275,652-15,277,703 | - | C2H12g25860 | CX12g015506 | LOC_Os12g29650 | Os12g0481000 | - | Detail |
| C1H12g01753 | 12:15,279,283-15,289,029 | - | C2H12g16531 | CX12g018204 | LOC_Os12g29660 | Os12g0481100 | - | Detail |
| C1H12g21829 | 12:15,290,869-15,292,249 | + | C2H12g28787 | - | LOC_Os12g29670 | Os12g0481200 | - | Detail |
| C1H12g20105 | 12:15,292,801-15,294,807 | - | C2H12g22196 | CX12g017949 | LOC_Os12g29690 | Os12g0481400 | - | Detail |
| C1H12g06560 | 12:15,295,297-15,299,880 | - | C2H12g22196 | CX12g017949 | LOC_Os12g29710 | Os12g0482100 | - | Detail |
| C1H12g11777 | 12:15,311,188-15,312,864 | + | C2H12g22840 | - | - | Os12g0481200 | - | Detail |
| C1H12g13977 | 12:15,314,435-15,315,069 | + | C2H12g28787 | - | LOC_Os12g29670 | Os12g0481200 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g029397 | 3:5,761,227-5,764,213 | + | C1H3g05662 | C2H3g20060 | LOC_Os03g12320 | Os03g0223900 | OsLPXC | Detail |
| CX3g029992 | 3:5,774,892-5,779,245 | + | C1H3g16565 | C2H3g29213 | LOC_Os03g12350 | Os03g0224200 | - | Detail |
| CX3g029383 | 3:5,780,831-5,784,143 | - | C1H3g12418 | C2H3g11335 | LOC_Os03g12360 | Os03g0224300 | - | Detail |
| CX3g025920 | 3:5,796,849-5,799,360 | + | C1H3g18389 | C2H3g05885 | LOC_Os03g12370 | Os03g0224700 | - | Detail |
| CX3g025136 | 3:5,804,474-5,805,493 | - | C1H3g09012 | C2H3g25300 | LOC_Os03g12390 | Os03g0225100 | MPKK10.2, OsMKK10-2, MKK10-2D | Detail |
| CX3g027495 | 3:5,812,870-5,816,693 | - | C1H3g14793 | C2H3g05543 | LOC_Os03g12414 | Os03g0225200 | - | Detail |
| CX3g027176 | 3:5,818,154-5,819,566 | - | C1H3g12506 | C2H3g22350 | LOC_Os03g12430 | Os03g0225300 | - | Detail |
| CX3g025280 | 3:5,822,363-5,824,763 | + | C1H3g23318 | C2H3g03359 | LOC_Os03g12440 | - | - | Detail |
| CX3g030046 | 3:5,826,086-5,834,450 | + | C1H3g17135 | C2H3g24748 | LOC_Os03g12450 | Os03g0225500 | - | Detail |
| CX3g028144 | 3:5,835,584-5,841,857 | + | C1H3g25680 | C2H3g09129 | LOC_Os03g12460 | Os03g0225600 | - | Detail |
| CX3g025098 | 3:5,843,739-5,848,413 | + | C1H3g10808 | C2H3g02566 | LOC_Os03g12470 | Os03g0225700 | WAK25, OsWAK25 | Detail |
| CX3g026153 | 3:5,861,373-5,862,224 | - | C1H3g02465 | C2H3g10692 | LOC_Os03g12510 | Os03g0226200 | Hb2, OsPgb1.2 | Detail |
| CX3g028573 | 3:5,863,694-5,866,110 | + | C1H3g31559 | C2H3g15869 | LOC_Os03g12520 | Os03g0226300 | - | Detail |
| CX3g027606 | 3:5,872,059-5,876,162 | + | C1H3g15877 | C2H3g29082 | LOC_Os03g12530 | Os03g0226400 | - | Detail |
| CX3g025975 | 3:5,883,076-5,889,445 | + | C1H3g27940 | C2H3g13286 | LOC_Os03g12550 | Os03g0226600 | - | Detail |
| CX3g027982 | 3:5,890,409-5,892,201 | - | C1H3g15687 | C2H3g30568 | LOC_Os03g12560 | Os03g0226700 | - | Detail |
| CX3g024984 | 3:5,893,447-5,899,229 | + | C1H3g18854 | C2H3g00790 | LOC_Os03g12570 | Os03g0226800 | CMT3b | Detail |
| CX3g027871 | 3:5,900,388-5,903,199 | + | C1H3g26728 | C2H3g22427 | LOC_Os03g12570 | Os03g0226901 | - | Detail |
| CX3g030829 | 3:5,907,319-5,914,142 | + | C1H3g26232 | C2H3g07335 | LOC_Os03g12590 | Os03g0227000 | - | Detail |
| CX3g026050 | 3:5,917,366-5,924,697 | + | C1H3g22048 | C2H3g16667 | LOC_Os03g12610 | Os03g0227300 | - | Detail |