| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g25593 | 1:37,549,145-37,551,244 | + | C2H1g23027 | CX1g004319 | LOC_Os01g72960 | Os01g0960000 | - | Detail |
| C1H1g17830 | 1:37,559,817-37,562,654 | + | C2H1g16511 | CX1g002518 | LOC_Os01g72970 | Os01g0960200 | - | Detail |
| C1H1g23836 | 1:37,563,304-37,569,571 | - | C2H1g22651 | CX1g007108 | LOC_Os01g72980 | Os01g0960300 | - | Detail |
| C1H1g14029 | 1:37,570,181-37,582,538 | - | C2H1g16152 | CX1g006984 | LOC_Os01g72990 | Os01g0960400 | - | Detail |
| C1H1g11322 | 1:37,589,237-37,590,549 | + | C2H1g08037 | CX1g001646 | - | Os01g0330200 | - | Detail |
| C1H1g17225 | 1:37,590,892-37,595,160 | - | C2H1g18993 | CX1g006298 | LOC_Os01g73000 | Os01g0960500 | - | Detail |
| C1H1g29525 | 1:37,598,330-37,600,614 | - | C2H1g16817 | CX1g002410 | LOC_Os01g73005 | Os01g0960600 | - | Detail |
| C1H1g11960 | 1:37,601,413-37,603,166 | - | C2H1g12796 | CX1g003397 | LOC_Os10g33910 | Os01g0960800 | - | Detail |
| C1H1g30659 | 1:37,605,288-37,608,762 | - | C2H1g21477 | CX1g004417 | LOC_Os01g68510 | Os01g0960900 | - | Detail |
| C1H1g23099 | 1:37,611,693-37,611,950 | + | - | CX1g002602 | LOC_Os01g73024 | Os01g0961000 | - | Detail |
| C1H1g25253 | 1:37,617,505-37,621,414 | + | C2H1g15167 | CX1g004462 | LOC_Os01g73040 | Os01g0961200 | - | Detail |
| C1H1g00215 | 1:37,625,296-37,626,462 | + | C2H1g03839 | CX1g002423 | LOC_Os01g73110 | Os01g0962100 | - | Detail |
| C1H1g24375 | 1:37,626,978-37,630,140 | - | C2H1g19213 | CX1g001400 | LOC_Os01g73120 | Os01g0962200 | - | Detail |
| C1H1g10143 | 1:37,631,278-37,632,147 | + | C2H1g20002 | CX1g002991 | LOC_Os01g73130 | Os01g0962300 | - | Detail |
| C1H1g04050 | 1:37,632,660-37,634,570 | - | C2H1g29126 | CX1g001063 | LOC_Os01g73140 | Os01g0962400 | - | Detail |
| C1H1g12385 | 1:37,635,147-37,637,853 | - | C2H1g16743 | CX1g000098 | LOC_Os01g73150 | Os01g0962500 | - | Detail |
| C1H1g24570 | 1:37,638,607-37,640,785 | - | C2H1g29119 | CX1g002133 | LOC_Os01g73160 | Os01g0962600 | - | Detail |
| C1H1g28549 | 1:37,642,947-37,645,994 | + | C2H1g24930 | CX1g004177 | LOC_Os01g73170 | Os01g0962700 | - | Detail |
| C1H1g28334 | 1:37,649,644-37,650,893 | + | C2H1g06611 | CX1g005398 | LOC_Os01g73190 | Os01g0962900 | - | Detail |
| C1H1g16502 | 1:37,653,097-37,654,173 | + | C2H1g10822 | CX1g001029 | LOC_Os01g73200 | Os01g0963000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g029397 | 3:5,761,227-5,764,213 | + | C1H3g05662 | C2H3g20060 | LOC_Os03g12320 | Os03g0223900 | OsLPXC | Detail |
| CX3g029992 | 3:5,774,892-5,779,245 | + | C1H3g16565 | C2H3g29213 | LOC_Os03g12350 | Os03g0224200 | - | Detail |
| CX3g029383 | 3:5,780,831-5,784,143 | - | C1H3g12418 | C2H3g11335 | LOC_Os03g12360 | Os03g0224300 | - | Detail |
| CX3g025920 | 3:5,796,849-5,799,360 | + | C1H3g18389 | C2H3g05885 | LOC_Os03g12370 | Os03g0224700 | - | Detail |
| CX3g025136 | 3:5,804,474-5,805,493 | - | C1H3g09012 | C2H3g25300 | LOC_Os03g12390 | Os03g0225100 | MPKK10.2, OsMKK10-2, MKK10-2D | Detail |
| CX3g027495 | 3:5,812,870-5,816,693 | - | C1H3g14793 | C2H3g05543 | LOC_Os03g12414 | Os03g0225200 | - | Detail |
| CX3g027176 | 3:5,818,154-5,819,566 | - | C1H3g12506 | C2H3g22350 | LOC_Os03g12430 | Os03g0225300 | - | Detail |
| CX3g025280 | 3:5,822,363-5,824,763 | + | C1H3g23318 | C2H3g03359 | LOC_Os03g12440 | - | - | Detail |
| CX3g030046 | 3:5,826,086-5,834,450 | + | C1H3g17135 | C2H3g24748 | LOC_Os03g12450 | Os03g0225500 | - | Detail |
| CX3g028144 | 3:5,835,584-5,841,857 | + | C1H3g25680 | C2H3g09129 | LOC_Os03g12460 | Os03g0225600 | - | Detail |
| CX3g025098 | 3:5,843,739-5,848,413 | + | C1H3g10808 | C2H3g02566 | LOC_Os03g12470 | Os03g0225700 | WAK25, OsWAK25 | Detail |
| CX3g026153 | 3:5,861,373-5,862,224 | - | C1H3g02465 | C2H3g10692 | LOC_Os03g12510 | Os03g0226200 | Hb2, OsPgb1.2 | Detail |
| CX3g028573 | 3:5,863,694-5,866,110 | + | C1H3g31559 | C2H3g15869 | LOC_Os03g12520 | Os03g0226300 | - | Detail |
| CX3g027606 | 3:5,872,059-5,876,162 | + | C1H3g15877 | C2H3g29082 | LOC_Os03g12530 | Os03g0226400 | - | Detail |
| CX3g025975 | 3:5,883,076-5,889,445 | + | C1H3g27940 | C2H3g13286 | LOC_Os03g12550 | Os03g0226600 | - | Detail |
| CX3g027982 | 3:5,890,409-5,892,201 | - | C1H3g15687 | C2H3g30568 | LOC_Os03g12560 | Os03g0226700 | - | Detail |
| CX3g024984 | 3:5,893,447-5,899,229 | + | C1H3g18854 | C2H3g00790 | LOC_Os03g12570 | Os03g0226800 | CMT3b | Detail |
| CX3g027871 | 3:5,900,388-5,903,199 | + | C1H3g26728 | C2H3g22427 | LOC_Os03g12570 | Os03g0226901 | - | Detail |
| CX3g030829 | 3:5,907,319-5,914,142 | + | C1H3g26232 | C2H3g07335 | LOC_Os03g12590 | Os03g0227000 | - | Detail |
| CX3g026050 | 3:5,917,366-5,924,697 | + | C1H3g22048 | C2H3g16667 | LOC_Os03g12610 | Os03g0227300 | - | Detail |