| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H9g21441 | 9:11,837,579-11,837,863 | + | - | - | LOC_Os09g24190 | Os09g0407050 | - | Detail |
| C1H9g24650 | 9:11,841,360-11,845,307 | + | C2H9g24241 | CX9g055965 | LOC_Os09g24200 | Os09g0407200 | - | Detail |
| C1H9g23904 | 9:11,850,864-11,853,754 | - | C2H9g02820 | CX9g057203 | LOC_Os09g24210 | Os09g0407300 | - | Detail |
| C1H9g02293 | 9:11,859,682-11,868,487 | + | C2H9g29912 | CX9g055864 | LOC_Os09g24220 | Os09g0407600 | OsMSH6 | Detail |
| C1H9g08629 | 9:11,869,421-11,871,457 | - | C2H9g01717 | CX9g056314 | LOC_Os09g24230 | Os09g0407700 | - | Detail |
| C1H9g09192 | 9:11,873,433-11,875,175 | - | C2H9g08999 | CX9g057332 | LOC_Os09g24240 | Os09g0407800 | - | Detail |
| C1H9g08004 | 9:11,876,808-11,881,498 | - | C2H9g04820 | CX9g055255 | LOC_Os09g24250 | Os09g0407900 | - | Detail |
| C1H9g20631 | 9:11,886,820-11,898,884 | + | C2H9g21364 | CX9g056605 | LOC_Os09g24260 | Os09g0408000 | - | Detail |
| C1H9g14259 | 9:11,919,586-11,923,670 | + | C2H9g07349 | CX10g008425 | LOC_Os09g24290 | Os09g0408300 | - | Detail |
| C1H9g31260 | 9:11,937,386-11,937,640 | + | C2H9g01448 | CX9g055135 | LOC_Os09g24310 | Os09g0408550 | - | Detail |
| C1H9g05602 | 9:11,938,276-11,941,057 | - | C2H9g08954 | CX9g058200 | LOC_Os09g24320 | Os09g0408600 | - | Detail |
| C1H9g31476 | 9:11,947,263-11,948,128 | + | C2H9g03900 | CX9g055752 | LOC_Os09g24330 | Os09g0314800 | - | Detail |
| C1H9g18300 | 9:11,951,879-11,953,084 | + | C2H9g12250 | CX9g057158 | LOC_Os09g24330 | Os09g0408900 | - | Detail |
| C1H9g05049 | 9:11,959,051-11,959,440 | - | - | CX9g055835 | LOC_Os09g24350 | Os09g0409000 | - | Detail |
| C1H9g21449 | 9:11,964,903-11,965,265 | - | - | - | LOC_Os09g24370 | Os09g0409100 | - | Detail |
| C1H9g04735 | 9:11,976,286-11,992,810 | + | C2H9g10480 | CX9g057897 | LOC_Os09g24440 | Os09g0410300 | TAF2 | Detail |
| C1H9g12574 | 9:11,994,347-11,999,137 | + | C2H9g06736 | CX9g055674 | - | - | - | Detail |
| C1H9g09322 | 9:12,000,673-12,001,999 | + | C2H9g06736 | - | - | Os09g0410400 | - | Detail |
| C1H9g03060 | 9:12,015,454-12,016,266 | + | - | CX9g055392 | LOC_Os09g24480 | Os09g0410500 | REP1, SDP1 | Detail |
| C1H9g03911 | 9:12,029,967-12,030,353 | + | C2H9g10864 | - | - | Os09g0315700 | Osppc2b | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g029397 | 3:5,761,227-5,764,213 | + | C1H3g05662 | C2H3g20060 | LOC_Os03g12320 | Os03g0223900 | OsLPXC | Detail |
| CX3g029992 | 3:5,774,892-5,779,245 | + | C1H3g16565 | C2H3g29213 | LOC_Os03g12350 | Os03g0224200 | - | Detail |
| CX3g029383 | 3:5,780,831-5,784,143 | - | C1H3g12418 | C2H3g11335 | LOC_Os03g12360 | Os03g0224300 | - | Detail |
| CX3g025920 | 3:5,796,849-5,799,360 | + | C1H3g18389 | C2H3g05885 | LOC_Os03g12370 | Os03g0224700 | - | Detail |
| CX3g025136 | 3:5,804,474-5,805,493 | - | C1H3g09012 | C2H3g25300 | LOC_Os03g12390 | Os03g0225100 | MPKK10.2, OsMKK10-2, MKK10-2D | Detail |
| CX3g027495 | 3:5,812,870-5,816,693 | - | C1H3g14793 | C2H3g05543 | LOC_Os03g12414 | Os03g0225200 | - | Detail |
| CX3g027176 | 3:5,818,154-5,819,566 | - | C1H3g12506 | C2H3g22350 | LOC_Os03g12430 | Os03g0225300 | - | Detail |
| CX3g025280 | 3:5,822,363-5,824,763 | + | C1H3g23318 | C2H3g03359 | LOC_Os03g12440 | - | - | Detail |
| CX3g030046 | 3:5,826,086-5,834,450 | + | C1H3g17135 | C2H3g24748 | LOC_Os03g12450 | Os03g0225500 | - | Detail |
| CX3g028144 | 3:5,835,584-5,841,857 | + | C1H3g25680 | C2H3g09129 | LOC_Os03g12460 | Os03g0225600 | - | Detail |
| CX3g025098 | 3:5,843,739-5,848,413 | + | C1H3g10808 | C2H3g02566 | LOC_Os03g12470 | Os03g0225700 | WAK25, OsWAK25 | Detail |
| CX3g026153 | 3:5,861,373-5,862,224 | - | C1H3g02465 | C2H3g10692 | LOC_Os03g12510 | Os03g0226200 | Hb2, OsPgb1.2 | Detail |
| CX3g028573 | 3:5,863,694-5,866,110 | + | C1H3g31559 | C2H3g15869 | LOC_Os03g12520 | Os03g0226300 | - | Detail |
| CX3g027606 | 3:5,872,059-5,876,162 | + | C1H3g15877 | C2H3g29082 | LOC_Os03g12530 | Os03g0226400 | - | Detail |
| CX3g025975 | 3:5,883,076-5,889,445 | + | C1H3g27940 | C2H3g13286 | LOC_Os03g12550 | Os03g0226600 | - | Detail |
| CX3g027982 | 3:5,890,409-5,892,201 | - | C1H3g15687 | C2H3g30568 | LOC_Os03g12560 | Os03g0226700 | - | Detail |
| CX3g024984 | 3:5,893,447-5,899,229 | + | C1H3g18854 | C2H3g00790 | LOC_Os03g12570 | Os03g0226800 | CMT3b | Detail |
| CX3g027871 | 3:5,900,388-5,903,199 | + | C1H3g26728 | C2H3g22427 | LOC_Os03g12570 | Os03g0226901 | - | Detail |
| CX3g030829 | 3:5,907,319-5,914,142 | + | C1H3g26232 | C2H3g07335 | LOC_Os03g12590 | Os03g0227000 | - | Detail |
| CX3g026050 | 3:5,917,366-5,924,697 | + | C1H3g22048 | C2H3g16667 | LOC_Os03g12610 | Os03g0227300 | - | Detail |