| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g20583 | 4:23,517,919-23,518,248 | - | C1H4g29571 | CX4g035537 | LOC_Os04g46060 | Os04g0545000 | OsWRKY36, SGSD3 | Detail |
| C2H4g10919 | 4:23,528,837-23,531,715 | - | C1H4g12807 | CX4g032824 | LOC_Os04g46079 | Os04g0545100 | - | Detail |
| C2H4g28241 | 4:23,532,724-23,538,259 | - | C1H4g02430 | CX4g033135 | LOC_Os04g46100 | Os04g0545200 | - | Detail |
| C2H4g05551 | 4:23,541,342-23,542,244 | - | C1H4g01759 | CX4g031916 | LOC_Os04g46110 | Os04g0545300 | - | Detail |
| C2H4g23072 | 4:23,543,516-23,544,191 | - | C1H4g22242 | CX4g035260 | LOC_Os04g46120 | Os04g0545400 | - | Detail |
| C2H4g24037 | 4:23,546,113-23,547,003 | - | C1H4g03888 | CX4g036612 | LOC_Os04g46130 | Os04g0545600 | - | Detail |
| C2H4g23805 | 4:23,548,773-23,550,069 | - | C1H4g21193 | CX4g035305 | LOC_Os04g46140 | Os04g0545700 | - | Detail |
| C2H4g15752 | 4:23,553,780-23,554,512 | - | C1H4g21864 | CX4g035243 | LOC_Os04g46160 | - | - | Detail |
| C2H4g25751 | 4:23,556,411-23,557,631 | + | - | CX4g032110 | LOC_Os04g46170 | Os04g0546100 | - | Detail |
| C2H4g17081 | 4:23,564,559-23,568,480 | + | C1H4g23759 | CX4g033618 | LOC_Os04g46180 | Os04g0546300 | OsAGC11 | Detail |
| C2H4g11468 | 4:23,569,536-23,572,382 | + | C1H4g03988 | CX4g034379 | LOC_Os04g46190 | Os04g0546400 | - | Detail |
| C2H4g20213 | 4:23,574,157-23,574,606 | - | C1H4g13285 | - | LOC_Os04g46200 | Os04g0546500 | - | Detail |
| C2H4g09322 | 4:23,579,114-23,580,040 | - | C1H4g07196 | CX4g033590 | LOC_Os04g46220 | Os04g0546800 | OsERF1 | Detail |
| C2H4g06793 | 4:23,611,215-23,612,204 | + | C1H4g06177 | CX4g032621 | LOC_Os04g46250 | Os04g0547600 | - | Detail |
| C2H4g07090 | 4:23,620,371-23,620,736 | - | - | CX4g036174 | LOC_Os01g45970 | Os08g0499532 | - | Detail |
| C2H4g18179 | 4:23,624,512-23,627,273 | + | C1H4g12670 | CX4g034183 | LOC_Os04g46280 | Os04g0547900 | - | Detail |
| C2H4g14899 | 4:23,627,851-23,630,916 | + | C1H4g10052 | CX4g033458 | LOC_Os04g46290 | Os04g0548000 | - | Detail |
| C2H4g03445 | 4:23,642,969-23,643,265 | + | - | CX4g031368 | - | - | - | Detail |
| C2H4g08504 | 4:23,643,669-23,646,524 | - | C1H4g30101 | CX4g036152 | LOC_Os04g46300 | Os04g0548100 | - | Detail |
| C2H4g03565 | 4:23,647,926-23,663,171 | + | C1H4g04798 | CX4g035683 | LOC_Os04g46310 | Os04g0548300 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g026270 | 3:5,614,642-5,616,392 | - | C1H3g10915 | C2H3g23972 | LOC_Os03g12030 | Os03g0220100 | WSL4, CER6/CUT1, CER6, CUT1, OsCER6 | Detail |
| CX3g025137 | 3:5,637,155-5,639,607 | + | C1H3g01618 | C2H3g23561 | LOC_Os03g12110 | Os03g0221200 | - | Detail |
| CX3g025281 | 3:5,640,506-5,647,764 | - | C1H3g06610 | C2H3g25327 | LOC_Os03g12120 | Os03g0221300 | - | Detail |
| CX3g028100 | 3:5,650,904-5,654,583 | + | C1H3g09947 | C2H3g25299 | LOC_Os03g12140 | Os03g0221500 | - | Detail |
| CX3g026372 | 3:5,657,955-5,660,492 | + | C1H3g29297 | C2H3g19033 | LOC_Os03g12150 | Os03g0221700 | SDRLK-9 | Detail |
| CX3g031100 | 3:5,660,963-5,669,034 | - | C1H3g11455 | C2H3g25606 | LOC_Os03g12160 | Os03g0221800 | - | Detail |
| CX3g028642 | 3:5,672,190-5,674,180 | - | C1H3g05328 | C2H3g28200 | LOC_Os03g12180 | Os03g0222100 | - | Detail |
| CX3g030699 | 3:5,676,564-5,677,169 | - | - | C2H2g29677 | - | - | - | Detail |
| CX3g031233 | 3:5,685,485-5,685,649 | + | - | - | - | - | - | Detail |
| CX3g031317 | 3:5,692,123-5,694,406 | + | C1H3g07232 | C2H3g09344 | LOC_Os03g12230 | Os03g0222600 | - | Detail |
| CX3g028958 | 3:5,695,882-5,700,628 | + | C1H3g04972 | C2H3g04698 | LOC_Os03g12236 | Os03g0222800 | - | Detail |
| CX3g027447 | 3:5,702,338-5,702,995 | + | C1H3g26972 | C2H3g19892 | LOC_Os03g12238 | - | - | Detail |
| CX3g028535 | 3:5,705,629-5,706,430 | - | C1H8g10018 | C2H12g28545 | LOC_Os08g06840 | - | - | Detail |
| CX3g031278 | 3:5,708,970-5,712,082 | + | C1H3g14957 | C2H3g10667 | LOC_Os03g12250 | Os03g0223000 | - | Detail |
| CX3g030840 | 3:5,717,439-5,719,025 | - | C1H3g14297 | C2H3g29015 | LOC_Os03g12260 | Os03g0223100 | CYP94D15, OsCYP94D15 | Detail |
| CX3g029663 | 3:5,724,364-5,726,767 | + | C1H3g13087 | C2H3g13113 | LOC_Os03g12270 | Os03g0223200 | - | Detail |
| CX3g028270 | 3:5,730,139-5,730,456 | - | - | - | LOC_Os03g02874 | - | - | Detail |
| CX3g028859 | 3:5,732,663-5,736,523 | - | C1H3g19225 | C2H3g16993 | LOC_Os03g12290 | Os03g0223400 | GLN1;2, OsGLN1;2, GSr, RGS8, OsGS1;2, GS1;2, GS1 | Detail |
| CX3g025777 | 3:5,741,409-5,748,715 | - | C1H3g02751 | C2H3g01042 | LOC_Os03g12300 | Os03g0223700 | - | Detail |
| CX3g027170 | 3:5,755,695-5,756,168 | + | - | - | LOC_Os03g12310 | Os06g0305200 | - | Detail |