| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H12g26650 | 12:14,387,144-14,387,437 | - | C1H1g26536 | CX12g016337 | - | - | - | Detail |
| C2H12g01667 | 12:14,389,150-14,391,585 | + | C1H12g20928 | CX12g016423 | LOC_Os12g27830 | Os12g0464400 | - | Detail |
| C2H12g23283 | 12:14,399,954-14,400,682 | + | C1H12g16659 | CX12g015400 | LOC_Os12g27850 | Os12g0465000 | - | Detail |
| C2H12g13573 | 12:14,419,281-14,420,007 | + | C1H12g04307 | CX12g015400 | LOC_Os12g27930 | Os12g0465000 | - | Detail |
| C2H12g04383 | 12:14,428,183-14,428,734 | + | C1H12g22166 | CX12g015400 | LOC_Os12g27940 | Os12g0465100 | - | Detail |
| C2H12g28192 | 12:14,431,353-14,431,949 | + | C1H12g19521 | - | LOC_Os12g27950 | Os12g0465100 | - | Detail |
| C2H12g07320 | 12:14,435,945-14,436,289 | + | C1H12g13640 | - | LOC_Os12g27960 | Os12g0465100 | - | Detail |
| C2H12g28215 | 12:14,445,092-14,450,813 | - | C1H12g17057 | CX12g018630 | LOC_Os12g27994 | Os12g0465700 | DEC, dec*, dec | Detail |
| C2H12g24524 | 12:14,451,981-14,452,739 | - | C1H12g19519 | CX12g015187 | LOC_Os12g27994 | Os12g0465800 | - | Detail |
| C2H12g19909 | 12:14,495,204-14,497,717 | - | C1H12g26205 | CX12g017176 | LOC_Os11g28740 | Os06g0588450 | - | Detail |
| C2H12g22145 | 12:14,509,734-14,510,078 | + | C1H12g27314 | - | LOC_Os12g28090 | Os12g0467200 | - | Detail |
| C2H12g01579 | 12:14,513,303-14,514,457 | + | C1H12g20841 | CX12g015667 | LOC_Os12g28090 | Os12g0467200 | - | Detail |
| C2H12g20179 | 12:14,515,142-14,522,387 | - | C1H12g25561 | CX12g017740 | LOC_Os12g28100 | Os12g0467300 | - | Detail |
| C2H12g17782 | 12:14,546,370-14,547,905 | + | C1H12g05419 | CX12g016802 | LOC_Os12g28137 | Os12g0467700 | - | Detail |
| C2H12g27812 | 12:14,584,350-14,587,763 | + | C1H12g11838 | CX12g016836 | LOC_Os12g28260 | Os12g0468500 | OsCNGC5 | Detail |
| C2H12g16369 | 12:14,587,803-14,594,221 | - | C1H12g15040 | CX12g017240 | LOC_Os12g28270 | Os12g0468600 | - | Detail |
| C2H12g16438 | 12:14,614,487-14,618,504 | + | C1H12g25201 | CX12g017257 | LOC_Os02g17020 | - | - | Detail |
| C2H12g21911 | 12:14,654,850-14,656,373 | - | C1H12g09824 | CX12g016867 | LOC_Os12g28177 | Os12g0470700 | - | Detail |
| C2H12g20584 | 12:14,685,650-14,686,165 | + | C1H12g10027 | CX12g015400 | LOC_Os12g28750 | Os12g0472500 | OsTDL1A, MIL2 | Detail |
| C2H12g07430 | 12:14,709,709-14,712,096 | - | C1H12g13184 | CX12g015433 | LOC_Os12g28770 | Os12g0472800 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g026270 | 3:5,614,642-5,616,392 | - | C1H3g10915 | C2H3g23972 | LOC_Os03g12030 | Os03g0220100 | WSL4, CER6/CUT1, CER6, CUT1, OsCER6 | Detail |
| CX3g025137 | 3:5,637,155-5,639,607 | + | C1H3g01618 | C2H3g23561 | LOC_Os03g12110 | Os03g0221200 | - | Detail |
| CX3g025281 | 3:5,640,506-5,647,764 | - | C1H3g06610 | C2H3g25327 | LOC_Os03g12120 | Os03g0221300 | - | Detail |
| CX3g028100 | 3:5,650,904-5,654,583 | + | C1H3g09947 | C2H3g25299 | LOC_Os03g12140 | Os03g0221500 | - | Detail |
| CX3g026372 | 3:5,657,955-5,660,492 | + | C1H3g29297 | C2H3g19033 | LOC_Os03g12150 | Os03g0221700 | SDRLK-9 | Detail |
| CX3g031100 | 3:5,660,963-5,669,034 | - | C1H3g11455 | C2H3g25606 | LOC_Os03g12160 | Os03g0221800 | - | Detail |
| CX3g028642 | 3:5,672,190-5,674,180 | - | C1H3g05328 | C2H3g28200 | LOC_Os03g12180 | Os03g0222100 | - | Detail |
| CX3g030699 | 3:5,676,564-5,677,169 | - | - | C2H2g29677 | - | - | - | Detail |
| CX3g031233 | 3:5,685,485-5,685,649 | + | - | - | - | - | - | Detail |
| CX3g031317 | 3:5,692,123-5,694,406 | + | C1H3g07232 | C2H3g09344 | LOC_Os03g12230 | Os03g0222600 | - | Detail |
| CX3g028958 | 3:5,695,882-5,700,628 | + | C1H3g04972 | C2H3g04698 | LOC_Os03g12236 | Os03g0222800 | - | Detail |
| CX3g027447 | 3:5,702,338-5,702,995 | + | C1H3g26972 | C2H3g19892 | LOC_Os03g12238 | - | - | Detail |
| CX3g028535 | 3:5,705,629-5,706,430 | - | C1H8g10018 | C2H12g28545 | LOC_Os08g06840 | - | - | Detail |
| CX3g031278 | 3:5,708,970-5,712,082 | + | C1H3g14957 | C2H3g10667 | LOC_Os03g12250 | Os03g0223000 | - | Detail |
| CX3g030840 | 3:5,717,439-5,719,025 | - | C1H3g14297 | C2H3g29015 | LOC_Os03g12260 | Os03g0223100 | CYP94D15, OsCYP94D15 | Detail |
| CX3g029663 | 3:5,724,364-5,726,767 | + | C1H3g13087 | C2H3g13113 | LOC_Os03g12270 | Os03g0223200 | - | Detail |
| CX3g028270 | 3:5,730,139-5,730,456 | - | - | - | LOC_Os03g02874 | - | - | Detail |
| CX3g028859 | 3:5,732,663-5,736,523 | - | C1H3g19225 | C2H3g16993 | LOC_Os03g12290 | Os03g0223400 | GLN1;2, OsGLN1;2, GSr, RGS8, OsGS1;2, GS1;2, GS1 | Detail |
| CX3g025777 | 3:5,741,409-5,748,715 | - | C1H3g02751 | C2H3g01042 | LOC_Os03g12300 | Os03g0223700 | - | Detail |
| CX3g027170 | 3:5,755,695-5,756,168 | + | - | - | LOC_Os03g12310 | Os06g0305200 | - | Detail |