| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H9g12131 | 9:17,601,316-17,605,550 | + | C1H9g23871 | CX9g055471 | LOC_Os09g36110 | Os09g0530800 | - | Detail |
| C2H9g01895 | 9:17,606,628-17,609,832 | - | C1H9g24630 | CX9g057214 | LOC_Os09g36130 | Os09g0531100 | - | Detail |
| C2H9g13265 | 9:17,614,232-17,615,532 | - | - | CX9g056838 | LOC_Os09g36140 | Os09g0531200 | - | Detail |
| C2H9g23806 | 9:17,636,055-17,637,102 | - | C1H9g07449 | CX9g057463 | LOC_Os09g36160 | Os09g0531600 | OsSHI1 | Detail |
| C2H9g17548 | 9:17,647,819-17,649,438 | - | C1H9g12530 | CX9g055764 | LOC_Os09g36180 | Os09g0531701 | - | Detail |
| C2H9g24133 | 9:17,652,317-17,656,377 | - | C1H9g31859 | CX9g056588 | LOC_Os09g36190 | Os09g0531800 | - | Detail |
| C2H9g14007 | 9:17,657,632-17,661,775 | - | C1H9g23936 | CX9g057674 | LOC_Os09g36190 | Os09g0531900 | OsPDT1 | Detail |
| C2H9g15175 | 9:17,663,896-17,665,579 | - | C1H9g17840 | CX9g054875 | LOC_Os09g36200 | Os09g0532000 | SGR, sgr(t), sgr, OsSGR | Detail |
| C2H9g26470 | 9:17,677,163-17,684,326 | - | C1H9g21979 | CX9g056292 | LOC_Os09g36220 | Os09g0532400 | - | Detail |
| C2H9g13859 | 9:17,693,336-17,699,284 | + | C1H9g13364 | CX9g056475 | LOC_Os09g36240 | Os09g0532700 | - | Detail |
| C2H9g15904 | 9:17,707,665-17,711,462 | - | C1H9g27789 | CX9g056485 | LOC_Os09g36250 | Os09g0532900 | - | Detail |
| C2H9g22512 | 9:17,713,114-17,717,456 | - | C1H9g26226 | - | LOC_Os09g36260 | - | - | Detail |
| C2H9g23482 | 9:17,717,633-17,718,025 | - | C1H9g26226 | - | - | - | - | Detail |
| C2H9g18689 | 9:17,719,675-17,729,643 | + | C1H9g20819 | CX9g056669 | LOC_Os09g36270 | Os09g0533100 | - | Detail |
| C2H9g03541 | 9:17,729,900-17,730,952 | - | C1H9g16977 | CX9g055747 | LOC_Os09g36280 | Os09g0533200 | - | Detail |
| C2H9g17268 | 9:17,741,825-17,744,879 | + | C1H9g06683 | CX9g057930 | LOC_Os09g36290 | Os09g0533300 | - | Detail |
| C2H9g04093 | 9:17,744,962-17,751,868 | - | C1H9g09436 | CX9g055811 | LOC_Os09g36300 | Os09g0533400 | OsLon1 | Detail |
| C2H9g07165 | 9:17,759,326-17,764,296 | - | C1H9g22235 | CX9g055531 | LOC_Os09g36320 | Os09g0533600 | BSR1 | Detail |
| C2H9g01514 | 9:17,768,374-17,771,907 | - | C1H9g28442 | CX9g057976 | LOC_Os09g36340 | Os09g0533800 | - | Detail |
| C2H9g09621 | 9:17,773,157-17,777,345 | - | C1H9g00314 | CX9g057631 | LOC_Os09g36350 | Os09g0533900 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g026270 | 3:5,614,642-5,616,392 | - | C1H3g10915 | C2H3g23972 | LOC_Os03g12030 | Os03g0220100 | WSL4, CER6/CUT1, CER6, CUT1, OsCER6 | Detail |
| CX3g025137 | 3:5,637,155-5,639,607 | + | C1H3g01618 | C2H3g23561 | LOC_Os03g12110 | Os03g0221200 | - | Detail |
| CX3g025281 | 3:5,640,506-5,647,764 | - | C1H3g06610 | C2H3g25327 | LOC_Os03g12120 | Os03g0221300 | - | Detail |
| CX3g028100 | 3:5,650,904-5,654,583 | + | C1H3g09947 | C2H3g25299 | LOC_Os03g12140 | Os03g0221500 | - | Detail |
| CX3g026372 | 3:5,657,955-5,660,492 | + | C1H3g29297 | C2H3g19033 | LOC_Os03g12150 | Os03g0221700 | SDRLK-9 | Detail |
| CX3g031100 | 3:5,660,963-5,669,034 | - | C1H3g11455 | C2H3g25606 | LOC_Os03g12160 | Os03g0221800 | - | Detail |
| CX3g028642 | 3:5,672,190-5,674,180 | - | C1H3g05328 | C2H3g28200 | LOC_Os03g12180 | Os03g0222100 | - | Detail |
| CX3g030699 | 3:5,676,564-5,677,169 | - | - | C2H2g29677 | - | - | - | Detail |
| CX3g031233 | 3:5,685,485-5,685,649 | + | - | - | - | - | - | Detail |
| CX3g031317 | 3:5,692,123-5,694,406 | + | C1H3g07232 | C2H3g09344 | LOC_Os03g12230 | Os03g0222600 | - | Detail |
| CX3g028958 | 3:5,695,882-5,700,628 | + | C1H3g04972 | C2H3g04698 | LOC_Os03g12236 | Os03g0222800 | - | Detail |
| CX3g027447 | 3:5,702,338-5,702,995 | + | C1H3g26972 | C2H3g19892 | LOC_Os03g12238 | - | - | Detail |
| CX3g028535 | 3:5,705,629-5,706,430 | - | C1H8g10018 | C2H12g28545 | LOC_Os08g06840 | - | - | Detail |
| CX3g031278 | 3:5,708,970-5,712,082 | + | C1H3g14957 | C2H3g10667 | LOC_Os03g12250 | Os03g0223000 | - | Detail |
| CX3g030840 | 3:5,717,439-5,719,025 | - | C1H3g14297 | C2H3g29015 | LOC_Os03g12260 | Os03g0223100 | CYP94D15, OsCYP94D15 | Detail |
| CX3g029663 | 3:5,724,364-5,726,767 | + | C1H3g13087 | C2H3g13113 | LOC_Os03g12270 | Os03g0223200 | - | Detail |
| CX3g028270 | 3:5,730,139-5,730,456 | - | - | - | LOC_Os03g02874 | - | - | Detail |
| CX3g028859 | 3:5,732,663-5,736,523 | - | C1H3g19225 | C2H3g16993 | LOC_Os03g12290 | Os03g0223400 | GLN1;2, OsGLN1;2, GSr, RGS8, OsGS1;2, GS1;2, GS1 | Detail |
| CX3g025777 | 3:5,741,409-5,748,715 | - | C1H3g02751 | C2H3g01042 | LOC_Os03g12300 | Os03g0223700 | - | Detail |
| CX3g027170 | 3:5,755,695-5,756,168 | + | - | - | LOC_Os03g12310 | Os06g0305200 | - | Detail |