| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H12g27576 | 12:16,895,695-16,897,940 | - | C2H12g04487 | CX12g018613 | LOC_Os12g32940 | Os12g0514000 | OsPLT15 | Detail |
| C1H12g02478 | 12:16,903,425-16,905,314 | - | C2H12g14026 | CX12g015332 | LOC_Os12g32950 | Os12g0514100 | - | Detail |
| C1H12g29231 | 12:16,916,214-16,916,816 | - | C2H12g26822 | CX12g016868 | LOC_Os12g32970 | Os12g0514300 | - | Detail |
| C1H12g18347 | 12:16,919,766-16,923,416 | - | C2H12g20474 | CX12g018673 | LOC_Os12g32980 | Os12g0514400 | SAB23 | Detail |
| C1H12g11241 | 12:16,925,319-16,931,217 | - | C2H12g13347 | CX12g017191 | LOC_Os12g32986 | Os12g0514500 | - | Detail |
| C1H12g21511 | 12:16,932,270-16,936,383 | - | C2H12g29103 | CX12g017474 | LOC_Os12g32992 | Os12g0514600 | - | Detail |
| C1H12g00544 | 12:16,940,250-16,943,796 | + | C2H12g05027 | CX12g016990 | LOC_Os12g33020 | Os12g0514900 | - | Detail |
| C1H12g30514 | 12:16,950,628-16,951,847 | + | C2H12g13196 | CX12g016294 | - | Os12g0133800 | OsPIN1d | Detail |
| C1H12g17110 | 12:16,970,112-16,973,175 | - | C2H12g00435 | CX12g016248 | LOC_Os12g33070 | Os12g0515300 | OsMYB46 | Detail |
| C1H12g09493 | 12:16,986,864-16,990,140 | + | C2H12g00847 | CX12g016936 | LOC_Os12g33080 | Os12g0515400 | - | Detail |
| C1H12g04283 | 12:17,002,160-17,004,016 | + | C2H12g01460 | CX12g017334 | LOC_Os12g33090 | Os12g0515500 | - | Detail |
| C1H12g27762 | 12:17,010,261-17,014,368 | - | C2H12g23011 | CX12g018033 | LOC_Os12g33100 | Os12g0515600 | - | Detail |
| C1H12g07881 | 12:17,022,509-17,023,000 | + | C2H12g22740 | CX12g016228 | LOC_Os12g33120 | Os12g0515800 | DX1 | Detail |
| C1H12g16214 | 12:17,037,029-17,037,504 | + | C2H12g16497 | CX12g018212 | LOC_Os12g33130 | Os12g0516000 | - | Detail |
| C1H12g09158 | 12:17,045,359-17,046,586 | - | C2H12g30447 | CX12g018198 | LOC_Os12g33150 | Os12g0516200 | - | Detail |
| C1H12g08774 | 12:17,054,869-17,060,319 | - | C2H12g08937 | CX12g018650 | LOC_Os12g33165 | Os12g0516350 | - | Detail |
| C1H12g01683 | 12:17,064,768-17,067,542 | + | C2H12g05061 | - | LOC_Os12g33180 | Os12g0554000 | - | Detail |
| C1H12g29363 | 12:17,068,971-17,070,785 | - | C2H12g05761 | CX12g016031 | LOC_Os12g33194 | Os12g0516800 | - | Detail |
| C1H12g13648 | 12:17,077,196-17,081,097 | + | - | - | - | - | - | Detail |
| C1H12g06518 | 12:17,084,936-17,087,884 | + | C2H12g19791 | CX12g016769 | LOC_Os12g33220 | Os12g0517000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g026270 | 3:5,614,642-5,616,392 | - | C1H3g10915 | C2H3g23972 | LOC_Os03g12030 | Os03g0220100 | WSL4, CER6/CUT1, CER6, CUT1, OsCER6 | Detail |
| CX3g025137 | 3:5,637,155-5,639,607 | + | C1H3g01618 | C2H3g23561 | LOC_Os03g12110 | Os03g0221200 | - | Detail |
| CX3g025281 | 3:5,640,506-5,647,764 | - | C1H3g06610 | C2H3g25327 | LOC_Os03g12120 | Os03g0221300 | - | Detail |
| CX3g028100 | 3:5,650,904-5,654,583 | + | C1H3g09947 | C2H3g25299 | LOC_Os03g12140 | Os03g0221500 | - | Detail |
| CX3g026372 | 3:5,657,955-5,660,492 | + | C1H3g29297 | C2H3g19033 | LOC_Os03g12150 | Os03g0221700 | SDRLK-9 | Detail |
| CX3g031100 | 3:5,660,963-5,669,034 | - | C1H3g11455 | C2H3g25606 | LOC_Os03g12160 | Os03g0221800 | - | Detail |
| CX3g028642 | 3:5,672,190-5,674,180 | - | C1H3g05328 | C2H3g28200 | LOC_Os03g12180 | Os03g0222100 | - | Detail |
| CX3g030699 | 3:5,676,564-5,677,169 | - | - | C2H2g29677 | - | - | - | Detail |
| CX3g031233 | 3:5,685,485-5,685,649 | + | - | - | - | - | - | Detail |
| CX3g031317 | 3:5,692,123-5,694,406 | + | C1H3g07232 | C2H3g09344 | LOC_Os03g12230 | Os03g0222600 | - | Detail |
| CX3g028958 | 3:5,695,882-5,700,628 | + | C1H3g04972 | C2H3g04698 | LOC_Os03g12236 | Os03g0222800 | - | Detail |
| CX3g027447 | 3:5,702,338-5,702,995 | + | C1H3g26972 | C2H3g19892 | LOC_Os03g12238 | - | - | Detail |
| CX3g028535 | 3:5,705,629-5,706,430 | - | C1H8g10018 | C2H12g28545 | LOC_Os08g06840 | - | - | Detail |
| CX3g031278 | 3:5,708,970-5,712,082 | + | C1H3g14957 | C2H3g10667 | LOC_Os03g12250 | Os03g0223000 | - | Detail |
| CX3g030840 | 3:5,717,439-5,719,025 | - | C1H3g14297 | C2H3g29015 | LOC_Os03g12260 | Os03g0223100 | CYP94D15, OsCYP94D15 | Detail |
| CX3g029663 | 3:5,724,364-5,726,767 | + | C1H3g13087 | C2H3g13113 | LOC_Os03g12270 | Os03g0223200 | - | Detail |
| CX3g028270 | 3:5,730,139-5,730,456 | - | - | - | LOC_Os03g02874 | - | - | Detail |
| CX3g028859 | 3:5,732,663-5,736,523 | - | C1H3g19225 | C2H3g16993 | LOC_Os03g12290 | Os03g0223400 | GLN1;2, OsGLN1;2, GSr, RGS8, OsGS1;2, GS1;2, GS1 | Detail |
| CX3g025777 | 3:5,741,409-5,748,715 | - | C1H3g02751 | C2H3g01042 | LOC_Os03g12300 | Os03g0223700 | - | Detail |
| CX3g027170 | 3:5,755,695-5,756,168 | + | - | - | LOC_Os03g12310 | Os06g0305200 | - | Detail |