| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g06554 | 1:1,267,481-1,270,261 | - | C1H1g14698 | CX1g000136 | LOC_Os01g03640 | Os01g0127200 | OsLPR5, OsSTA2 | Detail |
| C2H1g21958 | 1:1,273,959-1,277,999 | - | C1H1g30854 | CX1g005762 | LOC_Os01g03650 | Os01g0127300 | - | Detail |
| C2H1g24576 | 1:1,278,156-1,280,615 | + | C1H1g00412 | CX1g003465 | LOC_Os01g03660 | Os01g0127400 | - | Detail |
| C2H1g17865 | 1:1,282,083-1,282,775 | + | C1H1g25838 | CX1g002042 | LOC_Os01g19970 | Os01g0127450 | - | Detail |
| C2H1g02319 | 1:1,283,305-1,284,401 | + | C1H1g17663 | CX1g005179 | LOC_Os01g03670 | Os01g0127500 | OsTKPR2 | Detail |
| C2H1g19770 | 1:1,285,305-1,285,871 | + | C1H1g11231 | CX1g002886 | LOC_Os01g03680 | Os01g0127600 | - | Detail |
| C2H1g03781 | 1:1,288,272-1,291,329 | + | C1H1g05668 | CX1g006285 | LOC_Os01g03690 | Os01g0127700 | - | Detail |
| C2H1g13836 | 1:1,297,101-1,302,164 | + | C1H1g08835 | CX1g004218 | LOC_Os01g03710 | Os01g0127900 | - | Detail |
| C2H1g25959 | 1:1,312,131-1,313,344 | - | C1H1g25654 | CX1g002896 | LOC_Os01g03720 | Os01g0128000 | MYB1, Os2R_MYB1 | Detail |
| C2H1g01385 | 1:1,324,388-1,326,037 | - | C1H1g31764 | CX1g004405 | LOC_Os01g03740 | Os01g0128100 | - | Detail |
| C2H1g18960 | 1:1,326,807-1,329,714 | + | C1H1g04042 | CX1g004550 | LOC_Os01g03730 | Os01g0128200 | - | Detail |
| C2H1g15883 | 1:1,329,952-1,330,824 | - | C1H1g30874 | CX1g002239 | LOC_Os01g03750 | Os01g0128300 | MHZ4 | Detail |
| C2H1g19347 | 1:1,331,825-1,337,142 | - | C1H1g07436 | CX1g006333 | LOC_Os01g03760 | Os01g0128400 | - | Detail |
| C2H1g18545 | 1:1,345,364-1,353,485 | + | C1H1g20521 | CX1g003056 | LOC_Os01g03820 | Os01g0128800 | - | Detail |
| C2H1g10390 | 1:1,366,798-1,368,202 | + | C1H1g27481 | CX1g002103 | LOC_Os01g03840 | Os01g0129200 | SL1, sl1(t), sl1, stl1, opb, OPB1, ps, PS, OPB | Detail |
| C2H1g17049 | 1:1,379,470-1,382,437 | - | C1H1g30507 | CX1g003490 | LOC_Os01g03870 | Os01g0129500 | - | Detail |
| C2H1g13371 | 1:1,395,250-1,396,259 | + | C1H1g11492 | CX1g006241 | LOC_Os01g03890 | Os01g0129600 | - | Detail |
| C2H1g20654 | 1:1,408,458-1,408,763 | - | - | CX1g003157 | LOC_Os01g03900 | Os01g0129800 | - | Detail |
| C2H1g29639 | 1:1,411,780-1,414,851 | - | C1H1g30416 | CX1g005809 | LOC_Os01g03914 | Os01g0130000 | - | Detail |
| C2H1g19941 | 1:1,416,854-1,417,432 | + | - | - | - | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g030548 | 3:5,494,609-5,498,313 | + | C1H3g21782 | C2H3g02073 | LOC_Os03g11720 | Os03g0216600 | - | Detail |
| CX3g029221 | 3:5,499,562-5,503,590 | - | C1H3g16227 | C2H3g12443 | LOC_Os03g11734 | Os03g0216700 | OsFRDL1 | Detail |
| CX3g029021 | 3:5,515,972-5,518,792 | + | C1H3g24567 | C2H3g18755 | LOC_Os03g11760 | Os03g0216800 | - | Detail |
| CX3g025795 | 3:5,522,636-5,527,416 | + | C1H3g18611 | C2H3g21216 | LOC_Os03g11770 | Os03g0216900 | - | Detail |
| CX3g025145 | 3:5,527,939-5,528,352 | - | C1H3g15471 | C2H3g13077 | LOC_Os03g11780 | Os03g0217000 | - | Detail |
| CX3g028210 | 3:5,530,124-5,530,723 | - | - | - | - | - | - | Detail |
| CX3g026323 | 3:5,530,292-5,534,720 | + | C1H3g22547 | C2H3g23651 | LOC_Os03g11790 | Os03g0217200 | - | Detail |
| CX3g026767 | 3:5,537,293-5,538,438 | - | C1H3g06016 | C2H3g23651 | LOC_Os03g11874 | Os03g0218200 | - | Detail |
| CX3g026533 | 3:5,539,833-5,544,435 | + | C1H3g25970 | C2H3g17874 | LOC_Os03g11890 | Os03g0218300 | - | Detail |
| CX3g031320 | 3:5,545,869-5,550,153 | - | C1H3g04450 | C2H3g10730 | LOC_Os03g11900 | Os03g0218400 | OsMST4 | Detail |
| CX3g026335 | 3:5,554,593-5,554,754 | + | - | - | - | - | - | Detail |
| CX3g030309 | 3:5,555,883-5,559,054 | - | C1H3g10632 | C2H3g22152 | LOC_Os03g11910 | Os03g0218500 | - | Detail |
| CX3g025032 | 3:5,574,990-5,577,731 | + | C1H3g06308 | C2H3g13924 | LOC_Os03g11950 | Os03g0219100 | OsSec14-26 | Detail |
| CX3g027163 | 3:5,580,948-5,583,985 | - | C1H3g24825 | C2H3g24481 | LOC_Os03g11960 | Os03g0219200 | OsCSD3 | Detail |
| CX3g028374 | 3:5,584,647-5,588,042 | - | C1H3g11590 | C2H3g03285 | LOC_Os03g11970 | Os03g0219300 | - | Detail |
| CX3g028318 | 3:5,589,687-5,591,608 | - | C1H3g20877 | C2H3g25818 | LOC_Os03g11980 | Os03g0219400 | - | Detail |
| CX3g029685 | 3:5,593,137-5,594,636 | + | C1H3g14036 | C2H3g26156 | LOC_Os03g11990 | Os03g0219500 | - | Detail |
| CX3g028368 | 3:5,596,887-5,598,608 | - | C1H3g26472 | C2H3g18310 | LOC_Os03g12000 | Os03g0219700 | - | Detail |
| CX3g026437 | 3:5,602,048-5,606,232 | + | C1H3g15777 | C2H3g00756 | LOC_Os03g12010 | Os03g0219800 | - | Detail |
| CX3g028610 | 3:5,606,723-5,608,775 | + | C1H3g13535 | C2H3g05450 | LOC_Os03g12020 | Os03g0219900 | - | Detail |