| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g03150 | 5:19,704,652-19,705,368 | + | C2H5g28435 | CX5g038773 | LOC_Os05g40950 | Os05g0488500 | - | Detail |
| C1H5g10864 | 5:19,706,559-19,708,748 | - | C2H5g15684 | CX5g037471 | LOC_Os05g40960 | Os05g0488600 | - | Detail |
| C1H5g29301 | 5:19,715,415-19,716,386 | - | C2H5g10762 | CX5g036864 | LOC_Os05g40980 | Os05g0488800 | OsSIRP1, SIRP1 | Detail |
| C1H5g30435 | 5:19,718,925-19,721,518 | + | C2H5g22368 | CX5g038499 | LOC_Os05g40990 | Os05g0488900 | - | Detail |
| C1H5g00494 | 5:19,724,120-19,729,605 | + | C2H5g07104 | CX5g038470 | LOC_Os05g41000 | Os05g0489000 | - | Detail |
| C1H5g12778 | 5:19,731,257-19,733,469 | + | C2H5g00595 | CX5g040097 | LOC_Os05g41010 | Os05g0489100 | - | Detail |
| C1H5g22216 | 5:19,735,943-19,737,161 | - | C2H5g23469 | - | LOC_Os05g41030 | Os05g0489200 | - | Detail |
| C1H5g05615 | 5:19,737,619-19,738,035 | - | C2H5g15924 | CX5g037795 | LOC_Os05g41030 | Os05g0489200 | - | Detail |
| C1H5g29364 | 5:19,741,494-19,744,765 | - | C2H5g27372 | CX5g037436 | LOC_Os05g41060 | Os05g0489600 | - | Detail |
| C1H5g11382 | 5:19,747,970-19,750,342 | + | C2H5g09500 | CX5g037252 | LOC_Os05g41070 | Os05g0489700 | HBF1, OsbZIP42 | Detail |
| C1H5g00326 | 5:19,752,002-19,752,268 | + | C2H5g01943 | CX5g039059 | - | Os05g0489750 | - | Detail |
| C1H5g30374 | 5:19,753,024-19,755,252 | - | C2H5g05322 | CX5g039132 | LOC_Os05g41080 | Os05g0489800 | OsCENH3 | Detail |
| C1H5g17926 | 5:19,756,621-19,760,399 | - | C2H5g07453 | CX5g038078 | LOC_Os05g41090 | Os05g0489900 | DMI3, OsDMI3, OsCCaMK1, OsCCaMK, OsCCAMK, CCAMK | Detail |
| C1H5g27285 | 5:19,761,302-19,763,281 | - | C2H5g20839 | CX5g037785 | LOC_Os05g41100 | Os05g0490000 | - | Detail |
| C1H5g14042 | 5:19,763,521-19,765,356 | + | C2H5g02383 | CX5g039362 | LOC_Os05g41110 | Os05g0490100 | - | Detail |
| C1H5g00258 | 5:19,766,408-19,772,462 | + | C2H5g16191 | CX5g038500 | LOC_Os05g41120 | Os05g0490200 | - | Detail |
| C1H5g17707 | 5:19,775,358-19,776,413 | - | C2H5g27761 | CX5g037621 | LOC_Os05g41130 | Os05g0490300 | - | Detail |
| C1H5g17579 | 5:19,784,564-19,791,022 | - | C2H5g07017 | CX5g039490 | LOC_Os05g41150 | Os05g0490400 | - | Detail |
| C1H5g31086 | 5:19,792,040-19,794,897 | - | C2H5g07145 | CX5g038921 | LOC_Os05g41166 | Os05g0490600 | CSA2 | Detail |
| C1H5g16631 | 5:19,798,346-19,804,273 | - | C2H5g25171 | CX5g037848 | LOC_Os05g41172 | Os05g0490700 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g030548 | 3:5,494,609-5,498,313 | + | C1H3g21782 | C2H3g02073 | LOC_Os03g11720 | Os03g0216600 | - | Detail |
| CX3g029221 | 3:5,499,562-5,503,590 | - | C1H3g16227 | C2H3g12443 | LOC_Os03g11734 | Os03g0216700 | OsFRDL1 | Detail |
| CX3g029021 | 3:5,515,972-5,518,792 | + | C1H3g24567 | C2H3g18755 | LOC_Os03g11760 | Os03g0216800 | - | Detail |
| CX3g025795 | 3:5,522,636-5,527,416 | + | C1H3g18611 | C2H3g21216 | LOC_Os03g11770 | Os03g0216900 | - | Detail |
| CX3g025145 | 3:5,527,939-5,528,352 | - | C1H3g15471 | C2H3g13077 | LOC_Os03g11780 | Os03g0217000 | - | Detail |
| CX3g028210 | 3:5,530,124-5,530,723 | - | - | - | - | - | - | Detail |
| CX3g026323 | 3:5,530,292-5,534,720 | + | C1H3g22547 | C2H3g23651 | LOC_Os03g11790 | Os03g0217200 | - | Detail |
| CX3g026767 | 3:5,537,293-5,538,438 | - | C1H3g06016 | C2H3g23651 | LOC_Os03g11874 | Os03g0218200 | - | Detail |
| CX3g026533 | 3:5,539,833-5,544,435 | + | C1H3g25970 | C2H3g17874 | LOC_Os03g11890 | Os03g0218300 | - | Detail |
| CX3g031320 | 3:5,545,869-5,550,153 | - | C1H3g04450 | C2H3g10730 | LOC_Os03g11900 | Os03g0218400 | OsMST4 | Detail |
| CX3g026335 | 3:5,554,593-5,554,754 | + | - | - | - | - | - | Detail |
| CX3g030309 | 3:5,555,883-5,559,054 | - | C1H3g10632 | C2H3g22152 | LOC_Os03g11910 | Os03g0218500 | - | Detail |
| CX3g025032 | 3:5,574,990-5,577,731 | + | C1H3g06308 | C2H3g13924 | LOC_Os03g11950 | Os03g0219100 | OsSec14-26 | Detail |
| CX3g027163 | 3:5,580,948-5,583,985 | - | C1H3g24825 | C2H3g24481 | LOC_Os03g11960 | Os03g0219200 | OsCSD3 | Detail |
| CX3g028374 | 3:5,584,647-5,588,042 | - | C1H3g11590 | C2H3g03285 | LOC_Os03g11970 | Os03g0219300 | - | Detail |
| CX3g028318 | 3:5,589,687-5,591,608 | - | C1H3g20877 | C2H3g25818 | LOC_Os03g11980 | Os03g0219400 | - | Detail |
| CX3g029685 | 3:5,593,137-5,594,636 | + | C1H3g14036 | C2H3g26156 | LOC_Os03g11990 | Os03g0219500 | - | Detail |
| CX3g028368 | 3:5,596,887-5,598,608 | - | C1H3g26472 | C2H3g18310 | LOC_Os03g12000 | Os03g0219700 | - | Detail |
| CX3g026437 | 3:5,602,048-5,606,232 | + | C1H3g15777 | C2H3g00756 | LOC_Os03g12010 | Os03g0219800 | - | Detail |
| CX3g028610 | 3:5,606,723-5,608,775 | + | C1H3g13535 | C2H3g05450 | LOC_Os03g12020 | Os03g0219900 | - | Detail |