| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g02694 | 2:26,215,452-26,215,769 | + | - | CX2g024090 | - | - | - | Detail |
| C2H2g15603 | 2:26,222,650-26,222,904 | + | - | CX2g022179 | - | Os02g0690200 | - | Detail |
| C2H2g22961 | 2:26,233,834-26,237,969 | + | C1H2g19734 | CX2g020202 | LOC_Os02g46490 | Os02g0690500 | - | Detail |
| C2H2g00909 | 2:26,239,880-26,241,148 | + | C1H2g25610 | CX2g020809 | LOC_Os02g46500 | Os02g0690600 | - | Detail |
| C2H2g19357 | 2:26,244,382-26,249,472 | + | C1H2g11473 | CX2g020402 | LOC_Os02g46510 | Os02g0690700 | OsAP2M | Detail |
| C2H2g07653 | 2:26,250,458-26,254,357 | + | C1H2g11176 | CX2g020071 | LOC_Os02g46520 | Os02g0690800 | - | Detail |
| C2H2g02673 | 2:26,271,567-26,275,125 | + | C1H2g15714 | CX2g020104 | LOC_Os02g46560 | Os02g0691500 | - | Detail |
| C2H2g06355 | 2:26,283,751-26,286,786 | - | C1H2g26668 | CX2g020287 | LOC_Os02g46600 | Os02g0692000 | - | Detail |
| C2H2g19755 | 2:26,300,010-26,301,100 | - | C1H2g08690 | CX2g020331 | LOC_Os02g46610 | Os02g0692700 | - | Detail |
| C2H2g26126 | 2:26,314,307-26,314,912 | + | - | CX2g021176 | LOC_Os02g46620 | Os02g0693000 | - | Detail |
| C2H2g15587 | 2:26,318,427-26,320,587 | - | C1H2g04605 | CX2g019373 | LOC_Os02g46640 | Os02g0693200 | - | Detail |
| C2H2g11767 | 2:26,324,167-26,324,549 | + | - | - | - | - | - | Detail |
| C2H2g03903 | 2:26,324,567-26,329,744 | + | C1H2g05451 | CX2g019631 | LOC_Os02g46650 | Os02g0693400 | - | Detail |
| C2H2g02426 | 2:26,331,082-26,333,291 | - | C1H2g25223 | CX2g018907 | LOC_Os02g46660 | Os02g0693500 | - | Detail |
| C2H2g17628 | 2:26,342,139-26,351,122 | - | C1H2g05557 | CX2g024164 | LOC_Os02g46680 | Os02g0693700 | - | Detail |
| C2H2g13379 | 2:26,355,378-26,355,897 | + | C1H2g28414 | CX2g019607 | - | - | - | Detail |
| C2H2g30208 | 2:26,357,542-26,359,147 | - | C1H2g30980 | CX2g024177 | LOC_Os02g46690 | Os02g0694100 | - | Detail |
| C2H2g25516 | 2:26,361,353-26,364,925 | - | C1H2g19021 | CX2g019276 | LOC_Os02g46700 | Os02g0694201 | - | Detail |
| C2H2g22485 | 2:26,369,395-26,373,198 | + | C1H2g23304 | CX2g023189 | LOC_Os02g46720 | Os02g0694400 | - | Detail |
| C2H2g20734 | 2:26,376,558-26,382,951 | + | C1H2g01147 | CX2g023189 | LOC_Os02g46730 | Os02g0694600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g028416 | 3:5,331,718-5,337,908 | + | C1H3g17331 | C2H3g17746 | LOC_Os03g11520 | Os03g0213900 | - | Detail |
| CX3g030880 | 3:5,338,946-5,343,894 | + | C1H3g12951 | C2H3g08543 | LOC_Os03g11530 | Os03g0214000 | - | Detail |
| CX3g028514 | 3:5,345,319-5,348,424 | + | C1H3g14932 | C2H3g18859 | LOC_Os03g11540 | Os03g0214100 | OsRPA70b | Detail |
| CX3g029924 | 3:5,349,407-5,354,485 | - | C1H3g10644 | C2H3g25555 | LOC_Os03g11550 | Os03g0214200 | - | Detail |
| CX3g027534 | 3:5,359,463-5,361,948 | - | C1H3g04750 | C2H3g22606 | LOC_Os03g11560 | Os03g0214400 | - | Detail |
| CX3g027043 | 3:5,364,897-5,368,271 | + | C1H3g15538 | C2H3g22039 | LOC_Os03g11570 | Os03g0214600 | - | Detail |
| CX3g029760 | 3:5,371,660-5,375,622 | - | C1H3g26605 | C2H3g17441 | LOC_Os03g11580 | Os03g0214900 | - | Detail |
| CX3g025722 | 3:5,378,049-5,379,158 | - | C1H3g00304 | C2H3g29664 | LOC_Os03g11590 | Os03g0215000 | - | Detail |
| CX3g029987 | 3:5,408,782-5,414,613 | + | C1H3g11825 | C2H3g24849 | LOC_Os03g11600 | Os03g0215200 | DL, dl(lop), lop, dl, dl1 | Detail |
| CX3g026708 | 3:5,420,485-5,428,798 | - | C1H3g00757 | C2H3g11270 | LOC_Os03g11614 | Os03g0215400 | LHS1, OsMADS1, LHS, lhs1, lhs, lhs2, op, nsr, MADS1, LHS1/OsMADS1, Lhs1, AFO | Detail |
| CX3g026583 | 3:5,447,786-5,452,135 | + | C1H3g30377 | C2H3g25916 | LOC_Os03g11650 | Os03g0215700 | - | Detail |
| CX3g026851 | 3:5,453,637-5,456,648 | + | C1H3g02997 | C2H3g12512 | LOC_Os03g11660 | Os03g0215800 | - | Detail |
| CX3g025630 | 3:5,457,479-5,459,509 | - | C1H3g12813 | C2H3g19342 | LOC_Os03g11670 | Os03g0215900 | OsPPR676, OsATP4 | Detail |
| CX3g030485 | 3:5,467,352-5,468,245 | - | C1H3g00186 | C2H3g13701 | LOC_Os03g11680 | Os03g0216000 | - | Detail |
| CX3g031083 | 3:5,479,904-5,480,053 | - | - | - | - | Os07g0616100 | - | Detail |
| CX3g027591 | 3:5,481,409-5,483,262 | + | C1H3g15045 | C2H3g30038 | LOC_Os03g11690 | Os03g0216300 | - | Detail |
| CX3g025663 | 3:5,483,923-5,484,234 | + | - | - | - | - | - | Detail |
| CX3g029865 | 3:5,484,951-5,486,129 | - | C1H3g15740 | C2H3g05049 | LOC_Os03g11700 | Os03g0216400 | - | Detail |
| CX3g030660 | 3:5,487,288-5,488,340 | - | C1H3g17461 | C2H3g19799 | LOC_Os03g11710 | Os03g0216500 | - | Detail |
| CX3g026163 | 3:5,490,270-5,490,713 | - | C1H5g12553 | C2H5g24320 | - | - | - | Detail |