| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H9g13906 | 9:10,526,453-10,527,404 | + | C1H11g19220 | - | - | - | - | Detail |
| C2H9g09333 | 9:10,527,877-10,528,218 | + | C1H9g29795 | - | LOC_Os09g20490 | Os09g0371100 | - | Detail |
| C2H9g11466 | 9:10,530,032-10,531,134 | + | C1H9g15773 | - | LOC_Os09g20490 | Os09g0371100 | - | Detail |
| C2H9g23354 | 9:10,532,417-10,535,599 | + | C1H9g10150 | - | LOC_Os09g20500 | Os09g0371200 | - | Detail |
| C2H9g03171 | 9:10,536,862-10,539,182 | + | C1H9g30442 | - | LOC_Os09g20510 | Os09g0371100 | - | Detail |
| C2H9g13661 | 9:10,544,468-10,546,035 | + | C1H9g14290 | - | LOC_Os09g20520 | Os09g0371100 | - | Detail |
| C2H9g29737 | 9:10,554,477-10,560,684 | + | C1H9g13255 | CX9g056822 | LOC_Os09g20550 | Os09g0371700 | - | Detail |
| C2H9g20914 | 9:10,561,925-10,565,103 | + | C1H9g24353 | CX9g058116 | LOC_Os09g20560 | Os09g0371800 | - | Detail |
| C2H9g18955 | 9:10,585,786-10,591,397 | + | C1H9g04374 | CX9g056699 | LOC_Os09g20590 | Os09g0372400 | - | Detail |
| C2H9g10145 | 9:10,601,604-10,603,596 | + | C1H9g21178 | CX9g056705 | LOC_Os09g20630 | Os09g0372700 | - | Detail |
| C2H9g01317 | 9:10,604,395-10,607,685 | - | C1H9g28427 | CX9g057006 | LOC_Os09g20640 | Os09g0372800 | - | Detail |
| C2H9g10794 | 9:10,608,021-10,612,634 | + | C1H9g11515 | CX9g057473 | - | - | - | Detail |
| C2H9g13192 | 9:10,621,930-10,623,712 | - | C1H9g18641 | CX9g055929 | LOC_Os09g20660 | Os09g0373000 | - | Detail |
| C2H9g08105 | 9:10,630,837-10,639,896 | + | C1H9g22651 | CX9g055437 | LOC_Os09g20684 | Os09g0374900 | - | Detail |
| C2H9g08653 | 9:10,646,349-10,647,440 | + | C1H9g22651 | CX9g055662 | LOC_Os09g20684 | Os09g0374900 | - | Detail |
| C2H9g25240 | 9:10,652,624-10,653,133 | + | C1H9g24076 | CX9g055662 | LOC_Os09g20684 | Os09g0374900 | - | Detail |
| C2H9g05799 | 9:10,684,770-10,685,813 | - | C1H9g01978 | CX9g055547 | LOC_Os09g20740 | Os09g0373800 | - | Detail |
| C2H9g15195 | 9:10,690,096-10,691,348 | - | C1H9g05244 | CX9g055547 | LOC_Os09g20750 | - | - | Detail |
| C2H9g05168 | 9:10,718,725-10,722,433 | + | C1H9g03757 | CX9g055647 | LOC_Os09g20810 | Os09g0374900 | - | Detail |
| C2H9g15335 | 9:10,723,292-10,727,579 | - | C1H9g08490 | CX9g057566 | LOC_Os09g20820 | Os09g0375000 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g028416 | 3:5,331,718-5,337,908 | + | C1H3g17331 | C2H3g17746 | LOC_Os03g11520 | Os03g0213900 | - | Detail |
| CX3g030880 | 3:5,338,946-5,343,894 | + | C1H3g12951 | C2H3g08543 | LOC_Os03g11530 | Os03g0214000 | - | Detail |
| CX3g028514 | 3:5,345,319-5,348,424 | + | C1H3g14932 | C2H3g18859 | LOC_Os03g11540 | Os03g0214100 | OsRPA70b | Detail |
| CX3g029924 | 3:5,349,407-5,354,485 | - | C1H3g10644 | C2H3g25555 | LOC_Os03g11550 | Os03g0214200 | - | Detail |
| CX3g027534 | 3:5,359,463-5,361,948 | - | C1H3g04750 | C2H3g22606 | LOC_Os03g11560 | Os03g0214400 | - | Detail |
| CX3g027043 | 3:5,364,897-5,368,271 | + | C1H3g15538 | C2H3g22039 | LOC_Os03g11570 | Os03g0214600 | - | Detail |
| CX3g029760 | 3:5,371,660-5,375,622 | - | C1H3g26605 | C2H3g17441 | LOC_Os03g11580 | Os03g0214900 | - | Detail |
| CX3g025722 | 3:5,378,049-5,379,158 | - | C1H3g00304 | C2H3g29664 | LOC_Os03g11590 | Os03g0215000 | - | Detail |
| CX3g029987 | 3:5,408,782-5,414,613 | + | C1H3g11825 | C2H3g24849 | LOC_Os03g11600 | Os03g0215200 | DL, dl(lop), lop, dl, dl1 | Detail |
| CX3g026708 | 3:5,420,485-5,428,798 | - | C1H3g00757 | C2H3g11270 | LOC_Os03g11614 | Os03g0215400 | LHS1, OsMADS1, LHS, lhs1, lhs, lhs2, op, nsr, MADS1, LHS1/OsMADS1, Lhs1, AFO | Detail |
| CX3g026583 | 3:5,447,786-5,452,135 | + | C1H3g30377 | C2H3g25916 | LOC_Os03g11650 | Os03g0215700 | - | Detail |
| CX3g026851 | 3:5,453,637-5,456,648 | + | C1H3g02997 | C2H3g12512 | LOC_Os03g11660 | Os03g0215800 | - | Detail |
| CX3g025630 | 3:5,457,479-5,459,509 | - | C1H3g12813 | C2H3g19342 | LOC_Os03g11670 | Os03g0215900 | OsPPR676, OsATP4 | Detail |
| CX3g030485 | 3:5,467,352-5,468,245 | - | C1H3g00186 | C2H3g13701 | LOC_Os03g11680 | Os03g0216000 | - | Detail |
| CX3g031083 | 3:5,479,904-5,480,053 | - | - | - | - | Os07g0616100 | - | Detail |
| CX3g027591 | 3:5,481,409-5,483,262 | + | C1H3g15045 | C2H3g30038 | LOC_Os03g11690 | Os03g0216300 | - | Detail |
| CX3g025663 | 3:5,483,923-5,484,234 | + | - | - | - | - | - | Detail |
| CX3g029865 | 3:5,484,951-5,486,129 | - | C1H3g15740 | C2H3g05049 | LOC_Os03g11700 | Os03g0216400 | - | Detail |
| CX3g030660 | 3:5,487,288-5,488,340 | - | C1H3g17461 | C2H3g19799 | LOC_Os03g11710 | Os03g0216500 | - | Detail |
| CX3g026163 | 3:5,490,270-5,490,713 | - | C1H5g12553 | C2H5g24320 | - | - | - | Detail |