| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g27706 | 1:5,835,371-5,836,545 | - | C2H1g25264 | CX1g005454 | LOC_Os01g12130 | Os01g0220700 | - | Detail |
| C1H1g25539 | 1:5,840,866-5,848,036 | - | C2H1g05073 | CX1g005696 | LOC_Os01g12160 | Os01g0221100 | - | Detail |
| C1H1g29754 | 1:5,845,888-5,846,410 | + | - | - | - | - | - | Detail |
| C1H1g22662 | 1:5,857,475-5,861,583 | - | C2H1g06563 | CX1g004361 | LOC_Os01g12180 | Os01g0221300 | - | Detail |
| C1H1g19527 | 1:5,868,828-5,871,118 | + | C2H1g01549 | CX1g003668 | LOC_Os01g12200 | Os01g0221500 | - | Detail |
| C1H1g01490 | 1:5,875,229-5,878,327 | + | C2H1g21998 | CX1g006663 | LOC_Os01g12210 | Os01g0221600 | OsALMT4 | Detail |
| C1H1g22839 | 1:5,879,161-5,883,647 | + | C2H1g27039 | CX1g004398 | LOC_Os01g12220 | Os01g0221700 | - | Detail |
| C1H1g04353 | 1:5,883,657-5,886,627 | - | C2H1g08706 | CX1g001480 | LOC_Os01g12230 | Os01g0221900 | - | Detail |
| C1H1g22163 | 1:5,913,147-5,917,021 | - | C2H1g18747 | CX1g007256 | LOC_Os01g12250 | Os01g0222300 | - | Detail |
| C1H1g18905 | 1:5,918,323-5,921,779 | - | C2H1g08232 | CX1g000307 | LOC_Os01g12260 | Os01g0222500 | - | Detail |
| C1H1g26521 | 1:5,922,255-5,928,744 | - | C2H1g14445 | CX1g003772 | LOC_Os01g12280 | Os01g0222700 | - | Detail |
| C1H1g27082 | 1:5,932,256-5,934,443 | + | C2H1g25383 | CX1g005820 | LOC_Os01g12290 | Os01g0222800 | SDRLK-67 | Detail |
| C1H1g17957 | 1:5,937,881-5,939,400 | - | C2H1g07016 | CX1g003813 | LOC_Os01g12304 | Os01g0223000 | - | Detail |
| C1H1g06344 | 1:5,944,651-5,947,146 | - | C2H1g24822 | CX1g006438 | LOC_Os01g12320 | Os01g0223200 | - | Detail |
| C1H1g05231 | 1:5,947,164-5,947,493 | - | C2H1g23145 | CX1g006438 | LOC_Os01g12381 | Os01g0223200 | - | Detail |
| C1H1g10176 | 1:5,950,238-5,954,339 | + | C2H1g12626 | CX1g005986 | LOC_Os01g12330 | Os01g0223300 | - | Detail |
| C1H1g23419 | 1:5,954,534-5,956,901 | - | C2H1g16700 | CX1g007036 | LOC_Os01g12320 | Os01g0223500 | - | Detail |
| C1H1g06578 | 1:5,957,240-5,960,889 | - | C2H1g12655 | CX1g001470 | LOC_Os01g12390 | Os01g0223600 | OsSRLK | Detail |
| C1H1g19662 | 1:5,982,707-5,983,660 | - | C2H1g25383 | CX1g004809 | LOC_Os01g12400 | Os01g0223800 | SDRLK-ESG1, OsESG1 | Detail |
| C1H1g02057 | 1:5,984,128-5,987,467 | - | C2H1g06877 | CX1g005224 | LOC_Os01g12410 | Os01g0223800 | SDRLK-ESG1, OsESG1 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g028416 | 3:5,331,718-5,337,908 | + | C1H3g17331 | C2H3g17746 | LOC_Os03g11520 | Os03g0213900 | - | Detail |
| CX3g030880 | 3:5,338,946-5,343,894 | + | C1H3g12951 | C2H3g08543 | LOC_Os03g11530 | Os03g0214000 | - | Detail |
| CX3g028514 | 3:5,345,319-5,348,424 | + | C1H3g14932 | C2H3g18859 | LOC_Os03g11540 | Os03g0214100 | OsRPA70b | Detail |
| CX3g029924 | 3:5,349,407-5,354,485 | - | C1H3g10644 | C2H3g25555 | LOC_Os03g11550 | Os03g0214200 | - | Detail |
| CX3g027534 | 3:5,359,463-5,361,948 | - | C1H3g04750 | C2H3g22606 | LOC_Os03g11560 | Os03g0214400 | - | Detail |
| CX3g027043 | 3:5,364,897-5,368,271 | + | C1H3g15538 | C2H3g22039 | LOC_Os03g11570 | Os03g0214600 | - | Detail |
| CX3g029760 | 3:5,371,660-5,375,622 | - | C1H3g26605 | C2H3g17441 | LOC_Os03g11580 | Os03g0214900 | - | Detail |
| CX3g025722 | 3:5,378,049-5,379,158 | - | C1H3g00304 | C2H3g29664 | LOC_Os03g11590 | Os03g0215000 | - | Detail |
| CX3g029987 | 3:5,408,782-5,414,613 | + | C1H3g11825 | C2H3g24849 | LOC_Os03g11600 | Os03g0215200 | DL, dl(lop), lop, dl, dl1 | Detail |
| CX3g026708 | 3:5,420,485-5,428,798 | - | C1H3g00757 | C2H3g11270 | LOC_Os03g11614 | Os03g0215400 | LHS1, OsMADS1, LHS, lhs1, lhs, lhs2, op, nsr, MADS1, LHS1/OsMADS1, Lhs1, AFO | Detail |
| CX3g026583 | 3:5,447,786-5,452,135 | + | C1H3g30377 | C2H3g25916 | LOC_Os03g11650 | Os03g0215700 | - | Detail |
| CX3g026851 | 3:5,453,637-5,456,648 | + | C1H3g02997 | C2H3g12512 | LOC_Os03g11660 | Os03g0215800 | - | Detail |
| CX3g025630 | 3:5,457,479-5,459,509 | - | C1H3g12813 | C2H3g19342 | LOC_Os03g11670 | Os03g0215900 | OsPPR676, OsATP4 | Detail |
| CX3g030485 | 3:5,467,352-5,468,245 | - | C1H3g00186 | C2H3g13701 | LOC_Os03g11680 | Os03g0216000 | - | Detail |
| CX3g031083 | 3:5,479,904-5,480,053 | - | - | - | - | Os07g0616100 | - | Detail |
| CX3g027591 | 3:5,481,409-5,483,262 | + | C1H3g15045 | C2H3g30038 | LOC_Os03g11690 | Os03g0216300 | - | Detail |
| CX3g025663 | 3:5,483,923-5,484,234 | + | - | - | - | - | - | Detail |
| CX3g029865 | 3:5,484,951-5,486,129 | - | C1H3g15740 | C2H3g05049 | LOC_Os03g11700 | Os03g0216400 | - | Detail |
| CX3g030660 | 3:5,487,288-5,488,340 | - | C1H3g17461 | C2H3g19799 | LOC_Os03g11710 | Os03g0216500 | - | Detail |
| CX3g026163 | 3:5,490,270-5,490,713 | - | C1H5g12553 | C2H5g24320 | - | - | - | Detail |