| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g06127 | 3:32,303,571-32,307,779 | + | C1H3g24850 | CX3g027527 | LOC_Os03g62610 | Os03g0843200 | - | Detail |
| C2H3g01988 | 3:32,308,000-32,310,432 | - | C1H3g01007 | CX3g028344 | LOC_Os03g62620 | Os03g0843300 | - | Detail |
| C2H3g11755 | 3:32,310,721-32,312,657 | + | C1H3g21046 | CX3g025686 | LOC_Os03g62630 | Os03g0843400 | - | Detail |
| C2H3g01237 | 3:32,312,684-32,318,650 | - | C1H3g08743 | CX3g027867 | LOC_Os03g62640 | Os03g0843500 | - | Detail |
| C2H3g27702 | 3:32,319,596-32,327,026 | + | C1H3g28947 | CX3g030484 | LOC_Os03g62650 | Os03g0843600 | Os-CASTOR | Detail |
| C2H3g20877 | 3:32,328,441-32,332,474 | + | C1H3g22971 | CX3g029476 | LOC_Os03g62660 | Os03g0843700 | - | Detail |
| C2H3g21220 | 3:32,333,202-32,335,124 | + | C1H3g08128 | CX3g026603 | LOC_Os03g62670 | Os03g0843800 | OsHOL1 | Detail |
| C2H3g22425 | 3:32,335,748-32,339,201 | - | C1H3g30449 | CX3g027789 | LOC_Os03g62680 | Os03g0843900 | - | Detail |
| C2H3g21394 | 3:32,339,558-32,341,447 | + | C1H3g17557 | CX3g027520 | LOC_Os03g62690 | Os03g0844000 | - | Detail |
| C2H3g22805 | 3:32,345,973-32,351,479 | - | C1H3g24479 | CX3g026619 | LOC_Os03g62700 | Os03g0844100 | - | Detail |
| C2H3g19054 | 3:32,353,748-32,357,223 | + | C1H3g13171 | CX3g029702 | LOC_Os03g62720 | Os03g0844450 | - | Detail |
| C2H3g29284 | 3:32,358,635-32,363,299 | + | C1H3g03440 | CX3g030518 | LOC_Os03g62730 | Os03g0844500 | - | Detail |
| C2H3g07021 | 3:32,363,365-32,366,530 | - | C1H3g17919 | CX3g026392 | LOC_Os03g62740 | Os03g0844600 | - | Detail |
| C2H3g14850 | 3:32,370,593-32,376,702 | + | C1H3g09189 | CX3g027621 | LOC_Os03g62750 | Os03g0844700 | - | Detail |
| C2H3g09934 | 3:32,380,276-32,383,178 | - | C1H3g04796 | CX3g027114 | LOC_Os03g62780 | Os03g0844900 | - | Detail |
| C2H3g04637 | 3:32,383,797-32,385,237 | - | C1H3g08823 | CX3g027041 | LOC_Os03g62790 | Os03g0845000 | - | Detail |
| C2H3g26108 | 3:32,386,554-32,389,563 | - | C1H3g29234 | CX3g030975 | LOC_Os03g62830 | Os03g0845300 | - | Detail |
| C2H3g24255 | 3:32,390,402-32,390,950 | + | C1H3g31847 | CX3g025947 | LOC_Os03g62840 | - | - | Detail |
| C2H3g26469 | 3:32,391,795-32,400,675 | - | C1H3g01054 | CX3g027086 | LOC_Os03g62850 | Os03g0845500 | - | Detail |
| C2H3g09183 | 3:32,401,489-32,403,759 | - | C1H3g13526 | CX3g030387 | LOC_Os03g62860 | Os03g0845600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g001283 | 1:13,769,240-13,769,464 | - | - | - | - | Os09g0373750 | - | Detail |
| CX1g003305 | 1:13,782,320-13,782,511 | + | - | - | - | - | - | Detail |
| CX1g003934 | 1:13,784,988-13,791,999 | + | C1H1g21458 | C2H1g03369 | LOC_Os01g27020 | Os01g0367700 | - | Detail |
| CX1g006855 | 1:13,798,861-13,805,895 | - | C1H1g24923 | C2H1g04184 | LOC_Os01g27040 | Os01g0367900 | OsCHR728, CHR728, OsCHR11 | Detail |
| CX1g002622 | 1:13,808,166-13,809,557 | - | - | - | - | - | - | Detail |
| CX1g001803 | 1:13,814,944-13,815,279 | + | - | - | - | - | - | Detail |
| CX1g000946 | 1:13,817,316-13,817,597 | - | - | - | LOC_Os01g28380 | - | - | Detail |
| CX1g000728 | 1:13,822,321-13,823,657 | + | C1H1g29900 | C2H1g05311 | LOC_Os01g27100 | Os01g0368500 | - | Detail |
| CX1g000035 | 1:13,829,483-13,830,130 | + | C1H1g29900 | C2H1g05311 | LOC_Os01g27120 | Os01g0368700 | - | Detail |
| CX1g004970 | 1:13,836,989-13,837,267 | - | - | - | - | - | - | Detail |
| CX1g004894 | 1:13,841,178-13,841,386 | - | - | - | - | - | - | Detail |
| CX1g002302 | 1:13,845,046-13,852,808 | - | C1H1g21071 | C2H1g23898 | LOC_Os01g27150 | Os01g0369000 | - | Detail |
| CX1g000076 | 1:13,857,137-13,857,289 | + | - | - | - | - | - | Detail |
| CX1g007040 | 1:13,860,973-13,866,371 | + | C1H1g21722 | C2H1g08610 | LOC_Os01g27160 | Os01g0369200 | OsCUL1-3 | Detail |
| CX1g002985 | 1:13,866,896-13,871,581 | - | C1H1g09984 | C2H1g00961 | LOC_Os01g27170 | Os01g0369300 | OsHAK3 | Detail |
| CX1g004644 | 1:13,874,924-13,875,937 | + | C1H1g21027 | C2H1g23105 | LOC_Os01g27190 | Os01g0369500 | - | Detail |
| CX1g005028 | 1:13,879,674-13,880,133 | + | C1H1g28118 | C2H1g16294 | - | - | - | Detail |
| CX1g002058 | 1:13,884,746-13,886,038 | - | C1H1g15388 | C2H1g16460 | LOC_Os01g27210 | Os01g0369700 | - | Detail |
| CX1g005613 | 1:13,904,180-13,905,431 | - | C1H1g03904 | C2H1g16460 | LOC_Os01g27210 | Os01g0369700 | - | Detail |
| CX1g005792 | 1:13,906,318-13,906,641 | - | - | - | - | - | - | Detail |