| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H12g23890 | 12:4,138,465-4,142,802 | + | C1H12g22853 | CX12g017759 | LOC_Os12g09000 | Os12g0192500 | - | Detail |
| C2H12g18630 | 12:4,176,602-4,177,048 | + | C1H12g04899 | CX12g017759 | LOC_Os12g09000 | - | - | Detail |
| C2H12g03943 | 12:4,226,691-4,229,724 | - | C1H12g19513 | - | LOC_Os12g09060 | - | - | Detail |
| C2H12g02493 | 12:4,251,505-4,254,527 | + | C1H12g16068 | CX12g016460 | LOC_Os12g09320 | Os12g0181600 | OsAAP15 | Detail |
| C2H12g13234 | 12:4,258,587-4,262,274 | - | C1H12g03375 | CX12g015659 | LOC_Os12g09300 | Os12g0194900 | OsAAP4, OsAAP4a | Detail |
| C2H12g01465 | 12:4,270,454-4,278,713 | - | C1H12g16559 | CX12g017686 | LOC_Os12g09290 | Os12g0194800 | - | Detail |
| C2H12g20905 | 12:4,278,661-4,281,502 | + | C1H12g14699 | CX12g016700 | LOC_Os12g09280 | Os12g0194700 | - | Detail |
| C2H12g24786 | 12:4,282,863-4,287,212 | - | C1H12g12430 | CX12g018743 | LOC_Os12g09250 | Os12g0194600 | - | Detail |
| C2H12g06870 | 12:4,308,712-4,309,381 | - | C1H12g18185 | - | - | Os12g0194266 | - | Detail |
| C2H12g12025 | 12:4,312,514-4,315,748 | - | C1H12g08170 | CX12g017165 | LOC_Os12g09190 | Os12g0193800 | - | Detail |
| C2H12g14586 | 12:4,316,001-4,328,538 | + | C1H12g29621 | CX12g015349 | LOC_Os12g09120 | Os12g0193200 | - | Detail |
| C2H12g11874 | 12:4,330,920-4,335,854 | + | C1H12g21517 | CX12g018612 | LOC_Os12g09089 | Os12g0193100 | - | Detail |
| C2H12g23949 | 12:4,344,009-4,345,136 | - | C1H12g09926 | CX12g018030 | LOC_Os12g09080 | Os12g0193000 | OsBRXL6, OsBRXL5 | Detail |
| C2H12g27593 | 12:4,405,506-4,409,456 | - | C1H12g09634 | CX12g016281 | LOC_Os12g09540 | Os12g0197100 | - | Detail |
| C2H12g30512 | 12:4,422,101-4,425,844 | + | C1H12g03068 | CX12g017856 | LOC_Os12g09570 | Os12g0197400 | - | Detail |
| C2H12g12604 | 12:4,426,577-4,431,910 | - | C1H12g20394 | CX12g017219 | LOC_Os12g09580 | Os12g0197500 | - | Detail |
| C2H12g18171 | 12:4,433,415-4,438,669 | - | C1H12g19823 | CX12g018792 | LOC_Os12g09590 | Os12g0197700 | OsSGS3b | Detail |
| C2H12g18707 | 12:4,452,431-4,461,369 | + | C1H12g03605 | CX12g016062 | LOC_Os12g09610 | Os12g0197900 | - | Detail |
| C2H12g07996 | 12:4,466,040-4,470,796 | - | C1H12g29042 | CX12g017038 | LOC_Os12g09640 | Os12g0198200 | - | Detail |
| C2H12g09280 | 12:4,491,303-4,491,611 | - | C1H12g30959 | CX12g018011 | LOC_Os12g09670 | Os12g0198500 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g001283 | 1:13,769,240-13,769,464 | - | - | - | - | Os09g0373750 | - | Detail |
| CX1g003305 | 1:13,782,320-13,782,511 | + | - | - | - | - | - | Detail |
| CX1g003934 | 1:13,784,988-13,791,999 | + | C1H1g21458 | C2H1g03369 | LOC_Os01g27020 | Os01g0367700 | - | Detail |
| CX1g006855 | 1:13,798,861-13,805,895 | - | C1H1g24923 | C2H1g04184 | LOC_Os01g27040 | Os01g0367900 | OsCHR728, CHR728, OsCHR11 | Detail |
| CX1g002622 | 1:13,808,166-13,809,557 | - | - | - | - | - | - | Detail |
| CX1g001803 | 1:13,814,944-13,815,279 | + | - | - | - | - | - | Detail |
| CX1g000946 | 1:13,817,316-13,817,597 | - | - | - | LOC_Os01g28380 | - | - | Detail |
| CX1g000728 | 1:13,822,321-13,823,657 | + | C1H1g29900 | C2H1g05311 | LOC_Os01g27100 | Os01g0368500 | - | Detail |
| CX1g000035 | 1:13,829,483-13,830,130 | + | C1H1g29900 | C2H1g05311 | LOC_Os01g27120 | Os01g0368700 | - | Detail |
| CX1g004970 | 1:13,836,989-13,837,267 | - | - | - | - | - | - | Detail |
| CX1g004894 | 1:13,841,178-13,841,386 | - | - | - | - | - | - | Detail |
| CX1g002302 | 1:13,845,046-13,852,808 | - | C1H1g21071 | C2H1g23898 | LOC_Os01g27150 | Os01g0369000 | - | Detail |
| CX1g000076 | 1:13,857,137-13,857,289 | + | - | - | - | - | - | Detail |
| CX1g007040 | 1:13,860,973-13,866,371 | + | C1H1g21722 | C2H1g08610 | LOC_Os01g27160 | Os01g0369200 | OsCUL1-3 | Detail |
| CX1g002985 | 1:13,866,896-13,871,581 | - | C1H1g09984 | C2H1g00961 | LOC_Os01g27170 | Os01g0369300 | OsHAK3 | Detail |
| CX1g004644 | 1:13,874,924-13,875,937 | + | C1H1g21027 | C2H1g23105 | LOC_Os01g27190 | Os01g0369500 | - | Detail |
| CX1g005028 | 1:13,879,674-13,880,133 | + | C1H1g28118 | C2H1g16294 | - | - | - | Detail |
| CX1g002058 | 1:13,884,746-13,886,038 | - | C1H1g15388 | C2H1g16460 | LOC_Os01g27210 | Os01g0369700 | - | Detail |
| CX1g005613 | 1:13,904,180-13,905,431 | - | C1H1g03904 | C2H1g16460 | LOC_Os01g27210 | Os01g0369700 | - | Detail |
| CX1g005792 | 1:13,906,318-13,906,641 | - | - | - | - | - | - | Detail |