| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g00345 | 4:19,276,623-19,281,726 | - | C2H4g08466 | CX4g031490 | LOC_Os02g35310 | Os04g0443750 | - | Detail |
| C1H4g13740 | 4:19,287,095-19,289,818 | - | C2H4g24398 | CX4g031490 | LOC_Os02g35310 | Os04g0443750 | - | Detail |
| C1H4g18207 | 4:19,291,251-19,293,953 | - | C2H4g24197 | CX4g031490 | LOC_Os02g35310 | Os04g0443750 | - | Detail |
| C1H4g12484 | 4:19,295,444-19,296,334 | - | C2H4g10027 | CX4g036322 | LOC_Os02g35315 | Os04g0443801 | - | Detail |
| C1H4g12445 | 4:19,297,770-19,299,633 | - | C2H4g18187 | CX4g032651 | LOC_Os04g43560 | Os04g0536500 | - | Detail |
| C1H4g10795 | 4:19,305,209-19,309,530 | - | C2H4g06964 | CX4g035373 | LOC_Os04g46620 | Os04g0443900 | - | Detail |
| C1H4g01511 | 4:19,333,335-19,339,051 | + | C2H4g00367 | CX4g031398 | LOC_Os04g36660 | Os04g0444200 | - | Detail |
| C1H4g01464 | 4:19,355,451-19,359,891 | - | C2H4g21834 | CX4g032495 | LOC_Os04g36680 | Os04g0444400 | - | Detail |
| C1H4g10961 | 4:19,362,916-19,365,578 | + | C2H4g14271 | CX4g035262 | LOC_Os04g36700 | Os04g0444600 | - | Detail |
| C1H4g02574 | 4:19,377,161-19,382,996 | + | C2H4g22232 | CX4g032233 | LOC_Os04g36720 | Os04g0444800 | - | Detail |
| C1H4g19141 | 4:19,390,715-19,395,017 | + | C2H4g01316 | CX4g035751 | LOC_Os04g36720 | Os04g0444800 | - | Detail |
| C1H4g01276 | 4:19,396,405-19,398,702 | + | C2H4g08818 | CX4g033534 | LOC_Os04g36730 | Os04g0444900 | - | Detail |
| C1H4g22503 | 4:19,399,294-19,401,775 | - | C2H4g11016 | CX4g035720 | LOC_Os04g36740 | Os04g0445000 | OsSKOR | Detail |
| C1H4g28185 | 4:19,403,558-19,403,938 | - | C2H4g13134 | CX4g033595 | LOC_Os04g36740 | - | - | Detail |
| C1H4g28351 | 4:19,403,947-19,404,846 | - | C2H4g21365 | CX4g033595 | LOC_Os04g36740 | - | - | Detail |
| C1H4g21010 | 4:19,414,524-19,415,060 | - | C2H4g28013 | CX4g031649 | LOC_Os04g36760 | Os04g0445200 | - | Detail |
| C1H4g28209 | 4:19,417,756-19,420,419 | + | C2H4g12496 | CX4g036200 | LOC_Os04g36780 | Os04g0445400 | - | Detail |
| C1H4g17080 | 4:19,426,486-19,430,258 | - | C2H4g16998 | CX4g036306 | LOC_Os04g36800 | Os04g0445700 | - | Detail |
| C1H4g30441 | 4:19,433,116-19,436,436 | + | C2H4g01997 | CX4g033224 | LOC_Os04g36810 | Os04g0445800 | - | Detail |
| C1H4g30426 | 4:19,438,296-19,438,727 | - | C2H4g17382 | - | LOC_Os04g36820 | Os04g0445900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g001283 | 1:13,769,240-13,769,464 | - | - | - | - | Os09g0373750 | - | Detail |
| CX1g003305 | 1:13,782,320-13,782,511 | + | - | - | - | - | - | Detail |
| CX1g003934 | 1:13,784,988-13,791,999 | + | C1H1g21458 | C2H1g03369 | LOC_Os01g27020 | Os01g0367700 | - | Detail |
| CX1g006855 | 1:13,798,861-13,805,895 | - | C1H1g24923 | C2H1g04184 | LOC_Os01g27040 | Os01g0367900 | OsCHR728, CHR728, OsCHR11 | Detail |
| CX1g002622 | 1:13,808,166-13,809,557 | - | - | - | - | - | - | Detail |
| CX1g001803 | 1:13,814,944-13,815,279 | + | - | - | - | - | - | Detail |
| CX1g000946 | 1:13,817,316-13,817,597 | - | - | - | LOC_Os01g28380 | - | - | Detail |
| CX1g000728 | 1:13,822,321-13,823,657 | + | C1H1g29900 | C2H1g05311 | LOC_Os01g27100 | Os01g0368500 | - | Detail |
| CX1g000035 | 1:13,829,483-13,830,130 | + | C1H1g29900 | C2H1g05311 | LOC_Os01g27120 | Os01g0368700 | - | Detail |
| CX1g004970 | 1:13,836,989-13,837,267 | - | - | - | - | - | - | Detail |
| CX1g004894 | 1:13,841,178-13,841,386 | - | - | - | - | - | - | Detail |
| CX1g002302 | 1:13,845,046-13,852,808 | - | C1H1g21071 | C2H1g23898 | LOC_Os01g27150 | Os01g0369000 | - | Detail |
| CX1g000076 | 1:13,857,137-13,857,289 | + | - | - | - | - | - | Detail |
| CX1g007040 | 1:13,860,973-13,866,371 | + | C1H1g21722 | C2H1g08610 | LOC_Os01g27160 | Os01g0369200 | OsCUL1-3 | Detail |
| CX1g002985 | 1:13,866,896-13,871,581 | - | C1H1g09984 | C2H1g00961 | LOC_Os01g27170 | Os01g0369300 | OsHAK3 | Detail |
| CX1g004644 | 1:13,874,924-13,875,937 | + | C1H1g21027 | C2H1g23105 | LOC_Os01g27190 | Os01g0369500 | - | Detail |
| CX1g005028 | 1:13,879,674-13,880,133 | + | C1H1g28118 | C2H1g16294 | - | - | - | Detail |
| CX1g002058 | 1:13,884,746-13,886,038 | - | C1H1g15388 | C2H1g16460 | LOC_Os01g27210 | Os01g0369700 | - | Detail |
| CX1g005613 | 1:13,904,180-13,905,431 | - | C1H1g03904 | C2H1g16460 | LOC_Os01g27210 | Os01g0369700 | - | Detail |
| CX1g005792 | 1:13,906,318-13,906,641 | - | - | - | - | - | - | Detail |