| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g17800 | 1:35,072,056-35,073,345 | - | C2H1g26270 | CX1g005194 | - | Os01g0910500 | - | Detail |
| C1H1g26876 | 1:35,081,611-35,081,916 | - | - | CX1g000843 | LOC_Os01g68290 | Os01g0910800 | - | Detail |
| C1H1g03499 | 1:35,084,879-35,085,157 | - | - | CX1g003300 | LOC_Os01g68300 | Os01g0910900 | - | Detail |
| C1H1g25320 | 1:35,086,408-35,088,914 | - | C2H1g25905 | CX1g002099 | LOC_Os01g68310 | Os01g0911000 | - | Detail |
| C1H1g12270 | 1:35,090,727-35,095,011 | - | C2H1g09546 | CX1g001970 | LOC_Os01g68320 | Os01g0911100 | - | Detail |
| C1H1g28018 | 1:35,096,360-35,102,699 | + | C2H1g26092 | CX1g005611 | LOC_Os01g68324 | Os01g0911200 | - | Detail |
| C1H1g15073 | 1:35,103,367-35,107,918 | - | C2H1g20198 | CX1g006627 | LOC_Os01g68330 | Os01g0911300 | OsABCB24 | Detail |
| C1H1g14649 | 1:35,113,267-35,114,623 | - | - | CX1g002624 | - | - | - | Detail |
| C1H1g05271 | 1:35,119,178-35,122,621 | - | C2H1g13016 | CX1g003857 | LOC_Os01g68370 | Os01g0911700 | - | Detail |
| C1H1g30427 | 1:35,126,936-35,133,786 | + | C2H1g08337 | CX1g000675 | LOC_Os01g68380 | Os01g0911800 | - | Detail |
| C1H1g22874 | 1:35,134,078-35,138,723 | - | C2H1g12867 | CX1g002890 | LOC_Os01g68390 | Os01g0911900 | - | Detail |
| C1H1g22265 | 1:35,145,377-35,146,180 | + | C2H1g05404 | CX1g000734 | LOC_Os01g68420 | Os01g0912400 | - | Detail |
| C1H1g21619 | 1:35,148,025-35,151,944 | + | C2H1g23756 | CX1g000160 | LOC_Os01g68440 | Os01g0912600 | - | Detail |
| C1H1g25658 | 1:35,152,477-35,154,767 | + | C2H1g28134 | CX1g001438 | LOC_Os01g68450 | Os01g0912700 | - | Detail |
| C1H1g27519 | 1:35,157,732-35,158,615 | + | C2H1g22864 | CX1g003568 | LOC_Os01g68480 | Os01g0913000 | - | Detail |
| C1H1g22590 | 1:35,159,961-35,161,562 | - | C2H1g29005 | CX1g000736 | LOC_Os01g68490 | Os01g0912900 | - | Detail |
| C1H1g25855 | 1:35,165,015-35,165,807 | - | C2H1g04876 | CX1g006784 | LOC_Os01g68500 | Os01g0913100 | qSL-1f | Detail |
| C1H1g24123 | 1:35,172,229-35,177,165 | + | C2H1g30522 | CX1g001377 | LOC_Os01g68510 | Os01g0913300 | - | Detail |
| C1H1g23891 | 1:35,177,818-35,181,920 | - | C2H1g30357 | CX1g002741 | LOC_Os01g68524 | Os01g0913400 | - | Detail |
| C1H1g15441 | 1:35,184,042-35,185,340 | - | C2H1g04944 | CX1g003908 | LOC_Os01g68540 | Os01g0913600 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g001283 | 1:13,769,240-13,769,464 | - | - | - | - | Os09g0373750 | - | Detail |
| CX1g003305 | 1:13,782,320-13,782,511 | + | - | - | - | - | - | Detail |
| CX1g003934 | 1:13,784,988-13,791,999 | + | C1H1g21458 | C2H1g03369 | LOC_Os01g27020 | Os01g0367700 | - | Detail |
| CX1g006855 | 1:13,798,861-13,805,895 | - | C1H1g24923 | C2H1g04184 | LOC_Os01g27040 | Os01g0367900 | OsCHR728, CHR728, OsCHR11 | Detail |
| CX1g002622 | 1:13,808,166-13,809,557 | - | - | - | - | - | - | Detail |
| CX1g001803 | 1:13,814,944-13,815,279 | + | - | - | - | - | - | Detail |
| CX1g000946 | 1:13,817,316-13,817,597 | - | - | - | LOC_Os01g28380 | - | - | Detail |
| CX1g000728 | 1:13,822,321-13,823,657 | + | C1H1g29900 | C2H1g05311 | LOC_Os01g27100 | Os01g0368500 | - | Detail |
| CX1g000035 | 1:13,829,483-13,830,130 | + | C1H1g29900 | C2H1g05311 | LOC_Os01g27120 | Os01g0368700 | - | Detail |
| CX1g004970 | 1:13,836,989-13,837,267 | - | - | - | - | - | - | Detail |
| CX1g004894 | 1:13,841,178-13,841,386 | - | - | - | - | - | - | Detail |
| CX1g002302 | 1:13,845,046-13,852,808 | - | C1H1g21071 | C2H1g23898 | LOC_Os01g27150 | Os01g0369000 | - | Detail |
| CX1g000076 | 1:13,857,137-13,857,289 | + | - | - | - | - | - | Detail |
| CX1g007040 | 1:13,860,973-13,866,371 | + | C1H1g21722 | C2H1g08610 | LOC_Os01g27160 | Os01g0369200 | OsCUL1-3 | Detail |
| CX1g002985 | 1:13,866,896-13,871,581 | - | C1H1g09984 | C2H1g00961 | LOC_Os01g27170 | Os01g0369300 | OsHAK3 | Detail |
| CX1g004644 | 1:13,874,924-13,875,937 | + | C1H1g21027 | C2H1g23105 | LOC_Os01g27190 | Os01g0369500 | - | Detail |
| CX1g005028 | 1:13,879,674-13,880,133 | + | C1H1g28118 | C2H1g16294 | - | - | - | Detail |
| CX1g002058 | 1:13,884,746-13,886,038 | - | C1H1g15388 | C2H1g16460 | LOC_Os01g27210 | Os01g0369700 | - | Detail |
| CX1g005613 | 1:13,904,180-13,905,431 | - | C1H1g03904 | C2H1g16460 | LOC_Os01g27210 | Os01g0369700 | - | Detail |
| CX1g005792 | 1:13,906,318-13,906,641 | - | - | - | - | - | - | Detail |